RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 VGFO15240 615 aaPredicted RBP23.64■■□□□ 1.37
FGFR3-202ENST00000340107 UNC13AQ9UPW8 1703 aa23.64■■□□□ 1.37
FGFR3-202ENST00000340107 MINK1Q8N4C8 1332 aaPredicted RBP23.63■■□□□ 1.37
FGFR3-202ENST00000340107 CDK13Q14004 1512 aaKnown RBP23.63■■□□□ 1.37
FGFR3-202ENST00000340107 APAF1O14727 1248 aa23.62■■□□□ 1.37
FGFR3-202ENST00000340107 APBB1O00213 710 aa23.61■■□□□ 1.37
FGFR3-202ENST00000340107 BCL2L13Q9BXK5 485 aa23.61■■□□□ 1.37
FGFR3-202ENST00000340107 TROQ12816 1431 aaPredicted RBP23.61■■□□□ 1.37
FGFR3-202ENST00000340107 TMEM132EQ6IEE7 984 aa23.59■■□□□ 1.37
FGFR3-202ENST00000340107 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
FGFR3-202ENST00000340107 ITPRIPQ8IWB1 547 aa23.59■■□□□ 1.37
FGFR3-202ENST00000340107 NAIPQ13075 1403 aa23.58■■□□□ 1.37
FGFR3-202ENST00000340107 RTF1Q92541 710 aaKnown RBP23.58■■□□□ 1.37
FGFR3-202ENST00000340107 EXOC6Q8TAG9 804 aa23.58■■□□□ 1.37
FGFR3-202ENST00000340107 MIA2Q96PC5 1412 aa23.58■■□□□ 1.37
FGFR3-202ENST00000340107 SMC4Q9NTJ3 1288 aa23.57■■□□□ 1.36
FGFR3-202ENST00000340107 CFAP70Q5T0N1 1121 aa23.57■■□□□ 1.36
FGFR3-202ENST00000340107 EHBP1L1Q8N3D4 1523 aa23.56■■□□□ 1.36
FGFR3-202ENST00000340107 CNTLNQ9NXG0 1405 aa23.56■■□□□ 1.36
FGFR3-202ENST00000340107 FAM69CQ0P6D2 419 aa23.56■■□□□ 1.36
FGFR3-202ENST00000340107 SPRYD3Q8NCJ5 442 aa23.55■■□□□ 1.36
FGFR3-202ENST00000340107 CHMP4BQ9H444 224 aaKnown RBP23.55■■□□□ 1.36
FGFR3-202ENST00000340107 EPRSP07814 1512 aaKnown RBP23.55■■□□□ 1.36
FGFR3-202ENST00000340107 ARHGAP5Q13017 1502 aa23.55■■□□□ 1.36
FGFR3-202ENST00000340107 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
FGFR3-202ENST00000340107 IPO8O15397 1037 aaKnown RBP23.54■■□□□ 1.36
FGFR3-202ENST00000340107 TPRNQ4KMQ1 711 aa23.54■■□□□ 1.36
FGFR3-202ENST00000340107 C9orf84Q5VXU9 1444 aa23.54■■□□□ 1.36
FGFR3-202ENST00000340107 PCF11O94913 1555 aaKnown RBP23.54■■□□□ 1.36
FGFR3-202ENST00000340107 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
FGFR3-202ENST00000340107 TCERG1O14776 1098 aaKnown RBP23.53■■□□□ 1.36
FGFR3-202ENST00000340107 CCDC184Q52MB2 194 aa23.53■■□□□ 1.36
FGFR3-202ENST00000340107 ELL2O00472 640 aaPredicted RBP23.53■■□□□ 1.36
FGFR3-202ENST00000340107 NGDNQ8NEJ9 315 aaKnown RBP23.53■■□□□ 1.36
FGFR3-202ENST00000340107 KIAA0586Q9BVV6 1533 aa23.52■■□□□ 1.36
FGFR3-202ENST00000340107 NCLP19338 710 aaKnown RBP23.51■■□□□ 1.35
FGFR3-202ENST00000340107 EVC2Q86UK5 1308 aa23.51■■□□□ 1.35
FGFR3-202ENST00000340107 CASC1Q6TDU7 716 aa23.51■■□□□ 1.35
FGFR3-202ENST00000340107 URB2Q14146 1524 aaKnown RBP23.5■■□□□ 1.35
FGFR3-202ENST00000340107 EID1Q9Y6B2 187 aa23.5■■□□□ 1.35
FGFR3-202ENST00000340107 OS9Q13438 667 aaPredicted RBP23.5■■□□□ 1.35
FGFR3-202ENST00000340107 CGNL1Q0VF96 1302 aa23.5■■□□□ 1.35
FGFR3-202ENST00000340107 RRP1P56182 461 aaKnown RBP23.5■■□□□ 1.35
FGFR3-202ENST00000340107 DAPK1P53355 1430 aa23.49■■□□□ 1.35
FGFR3-202ENST00000340107 LTV1Q96GA3 475 aaPredicted RBP23.48■■□□□ 1.35
FGFR3-202ENST00000340107 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
FGFR3-202ENST00000340107 PLB1Q6P1J6 1458 aa23.47■■□□□ 1.35
FGFR3-202ENST00000340107 RWDD1Q9H446 243 aaPredicted RBP23.47■■□□□ 1.35
FGFR3-202ENST00000340107 CRBNQ96SW2 442 aa23.46■■□□□ 1.35
FGFR3-202ENST00000340107 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.35
FGFR3-202ENST00000340107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.45■■□□□ 1.342e-7■■■■□ 26.7
FGFR3-202ENST00000340107 GOLGA6L22H0YM25 854 aa23.45■■□□□ 1.34
FGFR3-202ENST00000340107 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
FGFR3-202ENST00000340107 SCAPERQ9BY12 1400 aa23.43■■□□□ 1.34
FGFR3-202ENST00000340107 HSP90AB1P08238 724 aaKnown RBP23.43■■□□□ 1.34
FGFR3-202ENST00000340107 CALD1Q05682 793 aaKnown RBP23.43■■□□□ 1.34
FGFR3-202ENST00000340107 HECW1Q76N89 1606 aa23.42■■□□□ 1.34
FGFR3-202ENST00000340107 ADAMTS8Q9UP79 889 aa23.42■■□□□ 1.34
FGFR3-202ENST00000340107 COG6Q9Y2V7 657 aa23.42■■□□□ 1.34
FGFR3-202ENST00000340107 CDCA7LQ96GN5 454 aa23.42■■□□□ 1.34
FGFR3-202ENST00000340107 IQGAP2Q13576 1575 aa23.41■■□□□ 1.34
FGFR3-202ENST00000340107 C11orf95C9JLR9 678 aaPredicted RBP23.41■■□□□ 1.34
FGFR3-202ENST00000340107 AMPHP49418 695 aa23.41■■□□□ 1.34
FGFR3-202ENST00000340107 SLKQ9H2G2 1235 aaPredicted RBP23.4■■□□□ 1.34
FGFR3-202ENST00000340107 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
FGFR3-202ENST00000340107 GGNBP2Q9H3C7 697 aa23.4■■□□□ 1.34
FGFR3-202ENST00000340107 RAPGEF3O95398 923 aa23.39■■□□□ 1.34
FGFR3-202ENST00000340107 SUPT6HQ7KZ85 1726 aaKnown RBP23.39■■□□□ 1.33
FGFR3-202ENST00000340107 E9PSI1 815 aa23.39■■□□□ 1.33
FGFR3-202ENST00000340107 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
FGFR3-202ENST00000340107 SLC4A10Q6U841 1118 aa23.37■■□□□ 1.33
FGFR3-202ENST00000340107 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
FGFR3-202ENST00000340107 PMFBP1Q8TBY8 1022 aa23.36■■□□□ 1.33
FGFR3-202ENST00000340107 STAC3Q96MF2 364 aa23.36■■□□□ 1.33
FGFR3-202ENST00000340107 HSCBQ8IWL3 235 aa23.35■■□□□ 1.33
FGFR3-202ENST00000340107 COG3Q96JB2 828 aa23.35■■□□□ 1.33
FGFR3-202ENST00000340107 RTN4Q9NQC3 1192 aaKnown RBP23.35■■□□□ 1.33
FGFR3-202ENST00000340107 CSB-PGBD3P0DP91 1061 aa23.34■■□□□ 1.33
FGFR3-202ENST00000340107 IPO9Q96P70 1041 aaKnown RBP23.33■■□□□ 1.33
FGFR3-202ENST00000340107 ABCC5O15440 1437 aa23.33■■□□□ 1.33
FGFR3-202ENST00000340107 SLC12A5Q9H2X9 1139 aa23.33■■□□□ 1.33
FGFR3-202ENST00000340107 KCNJ4P48050 445 aa23.33■■□□□ 1.32
FGFR3-202ENST00000340107 TAOK2Q9UL54 1235 aa23.33■■□□□ 1.32
FGFR3-202ENST00000340107 MFAP1P55081 439 aaKnown RBP23.32■■□□□ 1.32
FGFR3-202ENST00000340107 PDE4AP27815 886 aa23.31■■□□□ 1.32
FGFR3-202ENST00000340107 STK31Q9BXU1 1019 aa23.31■■□□□ 1.32
FGFR3-202ENST00000340107 MTHFSP49914 203 aa23.31■■□□□ 1.32
FGFR3-202ENST00000340107 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
FGFR3-202ENST00000340107 ANKRD30BQ9BXX2 1392 aa23.3■■□□□ 1.32
FGFR3-202ENST00000340107 PNISRQ8TF01 805 aaKnown RBP23.3■■□□□ 1.32
FGFR3-202ENST00000340107 DIAPH1O60610 1272 aaKnown RBP23.29■■□□□ 1.32
FGFR3-202ENST00000340107 DEKP35659 375 aaKnown RBP23.29■■□□□ 1.32
FGFR3-202ENST00000340107 TRIM44Q96DX7 344 aaPredicted RBP23.29■■□□□ 1.32
FGFR3-202ENST00000340107 BRD4O60885 1362 aaPredicted RBP23.29■■□□□ 1.32
FGFR3-202ENST00000340107 CUL7Q14999 1698 aa23.29■■□□□ 1.32
FGFR3-202ENST00000340107 MAP3K1Q13233 1512 aa23.28■■□□□ 1.32
FGFR3-202ENST00000340107 PPP2R1AP30153 589 aa23.28■■□□□ 1.32
FGFR3-202ENST00000340107 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
FGFR3-202ENST00000340107 RIPK4P57078 832 aa23.28■■□□□ 1.32
FGFR3-202ENST00000340107 SLC4A3P48751 1232 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms