RNA–Protein interactions for RNA: ENST00000339362.9

NEO1-202, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEO1, Length 7,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-202ENST00000339362 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.41■□□□□ 0.86
NEO1-202ENST00000339362 SRPK2P78362 688 aaKnown RBP20.39■□□□□ 0.85
NEO1-202ENST00000339362 RAB3GAP2Q9H2M9 1393 aa20.39■□□□□ 0.85
NEO1-202ENST00000339362 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
NEO1-202ENST00000339362 TPM1P09493 284 aa20.38■□□□□ 0.85
NEO1-202ENST00000339362 H3BQV1 296 aa20.38■□□□□ 0.85
NEO1-202ENST00000339362 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
NEO1-202ENST00000339362 CTDP1Q9Y5B0 961 aaPredicted RBP20.37■□□□□ 0.85
NEO1-202ENST00000339362 GOLGA6L19H0YKK7 550 aa20.37■□□□□ 0.85
NEO1-202ENST00000339362 PHF14O94880 888 aa20.37■□□□□ 0.85
NEO1-202ENST00000339362 RBM19Q9Y4C8 960 aaKnown RBP20.35■□□□□ 0.85
NEO1-202ENST00000339362 SKIDA1Q1XH10 827 aa20.34■□□□□ 0.85
NEO1-202ENST00000339362 KIF16BQ96L93 1317 aa20.34■□□□□ 0.85
NEO1-202ENST00000339362 KANK1Q14678 1352 aa20.34■□□□□ 0.85
NEO1-202ENST00000339362 NAP1L1P55209 391 aaKnown RBP20.33■□□□□ 0.84
NEO1-202ENST00000339362 TEX35Q5T0J7 233 aa20.33■□□□□ 0.84
NEO1-202ENST00000339362 ODF2Q5BJF6 829 aa20.32■□□□□ 0.84
NEO1-202ENST00000339362 RUFY1Q96T51 708 aa20.32■□□□□ 0.84
NEO1-202ENST00000339362 FOXD1Q16676 465 aa20.31■□□□□ 0.84
NEO1-202ENST00000339362 CWC22Q9HCG8 908 aaKnown RBP20.31■□□□□ 0.84
NEO1-202ENST00000339362 KTN1Q86UP2 1357 aaKnown RBP20.31■□□□□ 0.84
NEO1-202ENST00000339362 GTF2E1P29083 439 aaPredicted RBP20.31■□□□□ 0.84
NEO1-202ENST00000339362 PKD2Q13563 968 aa20.31■□□□□ 0.84
NEO1-202ENST00000339362 MLECQ14165 292 aa20.31■□□□□ 0.84
NEO1-202ENST00000339362 MORC1Q86VD1 984 aa20.31■□□□□ 0.84
NEO1-202ENST00000339362 AKAP17AQ02040 695 aaKnown RBP20.3■□□□□ 0.84
NEO1-202ENST00000339362 SLC4A10Q6U841 1118 aa20.3■□□□□ 0.84
NEO1-202ENST00000339362 BECN2A8MW95 431 aa20.3■□□□□ 0.84
NEO1-202ENST00000339362 HMMRO75330 724 aa20.3■□□□□ 0.84
NEO1-202ENST00000339362 ZFYVE27Q5T4F4 411 aa20.3■□□□□ 0.84
NEO1-202ENST00000339362 CT47A1Q5JQC4 288 aaPredicted RBP20.3■□□□□ 0.84
NEO1-202ENST00000339362 DHX37Q8IY37 1157 aaKnown RBP20.29■□□□□ 0.84
NEO1-202ENST00000339362 SAMD1Q6SPF0 538 aaPredicted RBP20.29■□□□□ 0.84
NEO1-202ENST00000339362 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
NEO1-202ENST00000339362 TRIM34Q9BYJ4 488 aa20.29■□□□□ 0.84
NEO1-202ENST00000339362 FAM184AQ8NB25 1140 aa20.28■□□□□ 0.84
NEO1-202ENST00000339362 SMARCA2P51531 1590 aa20.28■□□□□ 0.84
NEO1-202ENST00000339362 MCTP1Q6DN14 999 aa20.28■□□□□ 0.84
NEO1-202ENST00000339362 FBXW7Q969H0 707 aa20.28■□□□□ 0.84
NEO1-202ENST00000339362 PAF1Q8N7H5 531 aa20.28■□□□□ 0.84
NEO1-202ENST00000339362 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
NEO1-202ENST00000339362 AK7Q96M32 723 aa20.27■□□□□ 0.83
NEO1-202ENST00000339362 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
NEO1-202ENST00000339362 MPHOSPH9Q99550 1183 aa20.26■□□□□ 0.83
NEO1-202ENST00000339362 HOMER1Q86YM7 354 aa20.26■□□□□ 0.83
NEO1-202ENST00000339362 IPO7O95373 1038 aaKnown RBP20.25■□□□□ 0.83
NEO1-202ENST00000339362 CCDC191Q8NCU4 936 aa20.25■□□□□ 0.83
NEO1-202ENST00000339362 HSP90AB2PQ58FF8 381 aa20.25■□□□□ 0.83
NEO1-202ENST00000339362 STK26Q9P289 416 aa20.25■□□□□ 0.83
NEO1-202ENST00000339362 MSH5O43196 834 aa20.25■□□□□ 0.83
NEO1-202ENST00000339362 WIZO95785 1651 aa20.24■□□□□ 0.83
NEO1-202ENST00000339362 NOM1Q5C9Z4 860 aaKnown RBP20.23■□□□□ 0.83
NEO1-202ENST00000339362 RWDD1Q9H446 243 aaPredicted RBP20.22■□□□□ 0.83
NEO1-202ENST00000339362 ROCK2O75116 1388 aaKnown RBP20.22■□□□□ 0.83
NEO1-202ENST00000339362 RALBP1Q15311 655 aa20.22■□□□□ 0.83
NEO1-202ENST00000339362 CCDC43Q96MW1 224 aaKnown RBP20.21■□□□□ 0.83
NEO1-202ENST00000339362 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
NEO1-202ENST00000339362 TRHP20396 242 aaPredicted RBP20.2■□□□□ 0.82
NEO1-202ENST00000339362 CDR1P51861 262 aa20.2■□□□□ 0.82
NEO1-202ENST00000339362 TCERG1O14776 1098 aaKnown RBP20.2■□□□□ 0.82
NEO1-202ENST00000339362 RCAN3Q9UKA8 241 aa20.2■□□□□ 0.82
NEO1-202ENST00000339362 HSP90AB3PQ58FF7 597 aa20.2■□□□□ 0.82
NEO1-202ENST00000339362 H0YHG0 523 aa20.19■□□□□ 0.82
NEO1-202ENST00000339362 FAM13BQ9NYF5 915 aa20.19■□□□□ 0.82
NEO1-202ENST00000339362 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
NEO1-202ENST00000339362 STK31Q9BXU1 1019 aa20.19■□□□□ 0.82
NEO1-202ENST00000339362 RDXP35241 583 aaKnown RBP20.18■□□□□ 0.82
NEO1-202ENST00000339362 RILPL2Q969X0 211 aa20.18■□□□□ 0.82
NEO1-202ENST00000339362 ST18O60284 1047 aa20.18■□□□□ 0.82
NEO1-202ENST00000339362 NUP155O75694 1391 aa20.16■□□□□ 0.82
NEO1-202ENST00000339362 SYNE3Q6ZMZ3 975 aa20.16■□□□□ 0.82
NEO1-202ENST00000339362 CARMIL2Q6F5E8 1435 aa20.16■□□□□ 0.82
NEO1-202ENST00000339362 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
NEO1-202ENST00000339362 ANKRD20A12PQ8NF67 263 aa20.15■□□□□ 0.82
NEO1-202ENST00000339362 CCDC47Q96A33 483 aaKnown RBP20.15■□□□□ 0.82
NEO1-202ENST00000339362 TSHZ2Q9NRE2 1034 aa20.14■□□□□ 0.81
NEO1-202ENST00000339362 ANKRD62A6NC57 917 aa20.13■□□□□ 0.81
NEO1-202ENST00000339362 SPAG9O60271 1321 aaKnown RBP20.13■□□□□ 0.81
NEO1-202ENST00000339362 FOSBP53539 338 aa20.13■□□□□ 0.81
NEO1-202ENST00000339362 R3HCC1Q9Y3T6 440 aaKnown RBP20.13■□□□□ 0.81
NEO1-202ENST00000339362 TTLL5Q6EMB2 1281 aa20.13■□□□□ 0.81
NEO1-202ENST00000339362 U2AF1L5P0DN76 240 aaPredicted RBP20.13■□□□□ 0.81
NEO1-202ENST00000339362 U2AF1Q01081 240 aaKnown RBP eCLIP20.13■□□□□ 0.81
NEO1-202ENST00000339362 TRIM29Q14134 588 aa20.13■□□□□ 0.81
NEO1-202ENST00000339362 RAPGEF2Q9Y4G8 1499 aa20.12■□□□□ 0.81
NEO1-202ENST00000339362 NEFHP12036 1026 aa20.12■□□□□ 0.81
NEO1-202ENST00000339362 NOL10Q9BSC4 688 aaKnown RBP20.12■□□□□ 0.81
NEO1-202ENST00000339362 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
NEO1-202ENST00000339362 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
NEO1-202ENST00000339362 SMC4Q9NTJ3 1288 aa20.11■□□□□ 0.81
NEO1-202ENST00000339362 KLHL34Q8N239 644 aa20.11■□□□□ 0.81
NEO1-202ENST00000339362 PMFBP1Q8TBY8 1022 aa20.11■□□□□ 0.81
NEO1-202ENST00000339362 DCTN1Q14203 1278 aa20.11■□□□□ 0.81
NEO1-202ENST00000339362 AMOTL1Q8IY63 956 aa20.11■□□□□ 0.81
NEO1-202ENST00000339362 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
NEO1-202ENST00000339362 FHOD3Q2V2M9 1422 aa20.11■□□□□ 0.81
NEO1-202ENST00000339362 EPS15P42566 896 aa20.11■□□□□ 0.81
NEO1-202ENST00000339362 HDGFL2Q7Z4V5 671 aaPredicted RBP20.1■□□□□ 0.81
NEO1-202ENST00000339362 L3MBTL2Q969R5 705 aa20.1■□□□□ 0.81
NEO1-202ENST00000339362 CAGE1Q8TC20 777 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms