RNA–Protein interactions for RNA: ENST00000338895.7

DFFB-201, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 2 BASIC

Gene DFFB, Length 3,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-201ENST00000338895 SHANK2Q9UPX8 1470 aa17.62■□□□□ 0.41
DFFB-201ENST00000338895 SPAG9O60271 1321 aaKnown RBP17.62■□□□□ 0.41
DFFB-201ENST00000338895 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
DFFB-201ENST00000338895 PPP4R2Q9NY27 417 aa17.61■□□□□ 0.41
DFFB-201ENST00000338895 CDC42BPBQ9Y5S2 1711 aa17.6■□□□□ 0.41
DFFB-201ENST00000338895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.6■□□□□ 0.41
DFFB-201ENST00000338895 KIF3BO15066 747 aa17.58■□□□□ 0.41
DFFB-201ENST00000338895 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.41
DFFB-201ENST00000338895 RALGAPBQ86X10 1494 aa17.58■□□□□ 0.41
DFFB-201ENST00000338895 PANK3Q9H999 370 aa17.58■□□□□ 0.4
DFFB-201ENST00000338895 TRAPPC8Q9Y2L5 1435 aa17.57■□□□□ 0.4
DFFB-201ENST00000338895 KDM5CP41229 1560 aa17.57■□□□□ 0.4
DFFB-201ENST00000338895 ARHGEF12Q9NZN5 1544 aa17.56■□□□□ 0.4
DFFB-201ENST00000338895 UHRF1BP1Q6BDS2 1440 aa17.54■□□□□ 0.4
DFFB-201ENST00000338895 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
DFFB-201ENST00000338895 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
DFFB-201ENST00000338895 PLA2R1Q13018 1463 aa17.54■□□□□ 0.4
DFFB-201ENST00000338895 PREX2Q70Z35 1606 aa17.54■□□□□ 0.4
DFFB-201ENST00000338895 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
DFFB-201ENST00000338895 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
DFFB-201ENST00000338895 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
DFFB-201ENST00000338895 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
DFFB-201ENST00000338895 ARHGEF5Q12774 1597 aa17.52■□□□□ 0.4
DFFB-201ENST00000338895 MYT1Q01538 1121 aa17.52■□□□□ 0.4
DFFB-201ENST00000338895 ARID4BQ4LE39 1312 aaPredicted RBP17.52■□□□□ 0.39
DFFB-201ENST00000338895 TMF1P82094 1093 aa17.52■□□□□ 0.39
DFFB-201ENST00000338895 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
DFFB-201ENST00000338895 A2MP01023 1474 aa17.5■□□□□ 0.39
DFFB-201ENST00000338895 RALBP1Q15311 655 aa17.5■□□□□ 0.39
DFFB-201ENST00000338895 PLCH2O75038 1416 aa17.49■□□□□ 0.39
DFFB-201ENST00000338895 CDCA7LQ96GN5 454 aa17.49■□□□□ 0.39
DFFB-201ENST00000338895 NLRP13Q86W25 1043 aa17.49■□□□□ 0.39
DFFB-201ENST00000338895 TESK2Q96S53 571 aa17.49■□□□□ 0.39
DFFB-201ENST00000338895 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
DFFB-201ENST00000338895 ANP32EQ9BTT0 268 aa17.47■□□□□ 0.39
DFFB-201ENST00000338895 GGT6Q6P531 493 aa17.47■□□□□ 0.39
DFFB-201ENST00000338895 ERICH6Q7L0X2 663 aa17.46■□□□□ 0.39
DFFB-201ENST00000338895 KDM5DQ9BY66 1539 aa17.45■□□□□ 0.38
DFFB-201ENST00000338895 NUTM2DQ5VT03 806 aaPredicted RBP17.45■□□□□ 0.38
DFFB-201ENST00000338895 KNSTRNQ9Y448 316 aa17.45■□□□□ 0.38
DFFB-201ENST00000338895 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
DFFB-201ENST00000338895 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
DFFB-201ENST00000338895 PLIN1O60240 522 aa17.43■□□□□ 0.38
DFFB-201ENST00000338895 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
DFFB-201ENST00000338895 CFAP70Q5T0N1 1121 aa17.43■□□□□ 0.38
DFFB-201ENST00000338895 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
DFFB-201ENST00000338895 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
DFFB-201ENST00000338895 MSH5O43196 834 aa17.41■□□□□ 0.38
DFFB-201ENST00000338895 ERBINQ96RT1 1412 aa17.41■□□□□ 0.38
DFFB-201ENST00000338895 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
DFFB-201ENST00000338895 ZCCHC11Q5TAX3 1644 aaKnown RBP17.41■□□□□ 0.38
DFFB-201ENST00000338895 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
DFFB-201ENST00000338895 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
DFFB-201ENST00000338895 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
DFFB-201ENST00000338895 ERICH6BQ5W0A0 696 aa17.39■□□□□ 0.37
DFFB-201ENST00000338895 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
DFFB-201ENST00000338895 ADAMTS8Q9UP79 889 aa17.38■□□□□ 0.37
DFFB-201ENST00000338895 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
DFFB-201ENST00000338895 FANCAO15360 1455 aa17.37■□□□□ 0.37
DFFB-201ENST00000338895 KANK1Q14678 1352 aa17.37■□□□□ 0.37
DFFB-201ENST00000338895 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
DFFB-201ENST00000338895 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
DFFB-201ENST00000338895 ADGRF5Q8IZF2 1346 aa17.35■□□□□ 0.37
DFFB-201ENST00000338895 TRPM1Q7Z4N2 1603 aa17.34■□□□□ 0.37
DFFB-201ENST00000338895 TRAK1Q9UPV9 953 aa17.34■□□□□ 0.37
DFFB-201ENST00000338895 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
DFFB-201ENST00000338895 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.37
DFFB-201ENST00000338895 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.376e-6■■■□□ 18.5
DFFB-201ENST00000338895 NPM2Q86SE8 214 aaKnown RBP17.33■□□□□ 0.36
DFFB-201ENST00000338895 ADGRL1O94910 1474 aa17.33■□□□□ 0.36
DFFB-201ENST00000338895 ABCC1P33527 1531 aa17.33■□□□□ 0.36
DFFB-201ENST00000338895 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
DFFB-201ENST00000338895 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
DFFB-201ENST00000338895 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
DFFB-201ENST00000338895 UNC13BO14795 1591 aa17.32■□□□□ 0.36
DFFB-201ENST00000338895 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
DFFB-201ENST00000338895 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
DFFB-201ENST00000338895 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
DFFB-201ENST00000338895 RAPGEF3O95398 923 aa17.31■□□□□ 0.36
DFFB-201ENST00000338895 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
DFFB-201ENST00000338895 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
DFFB-201ENST00000338895 CFAP65Q6ZU64 1925 aaKnown RBP17.3■□□□□ 0.36
DFFB-201ENST00000338895 IQGAP3Q86VI3 1631 aa17.3■□□□□ 0.36
DFFB-201ENST00000338895 PPP2R1AP30153 589 aa17.3■□□□□ 0.36
DFFB-201ENST00000338895 ASXL2Q76L83 1435 aa17.29■□□□□ 0.36
DFFB-201ENST00000338895 PLXNC1O60486 1568 aa17.29■□□□□ 0.36
DFFB-201ENST00000338895 ATP10AO60312 1499 aa17.28■□□□□ 0.36
DFFB-201ENST00000338895 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
DFFB-201ENST00000338895 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
DFFB-201ENST00000338895 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
DFFB-201ENST00000338895 WASHC2CQ9Y4E1 1318 aa17.27■□□□□ 0.35
DFFB-201ENST00000338895 CDCA8Q53HL2 280 aa17.27■□□□□ 0.35
DFFB-201ENST00000338895 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
DFFB-201ENST00000338895 AMER1Q5JTC6 1135 aaPredicted RBP17.25■□□□□ 0.35
DFFB-201ENST00000338895 PRDM15P57071 1507 aaPredicted RBP17.24■□□□□ 0.35
DFFB-201ENST00000338895 UHRF1BP1LA0JNW5 1464 aa17.24■□□□□ 0.35
DFFB-201ENST00000338895 ZFYVE16Q7Z3T8 1539 aa17.24■□□□□ 0.35
DFFB-201ENST00000338895 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
DFFB-201ENST00000338895 E9PCH4 1651 aa17.23■□□□□ 0.35
DFFB-201ENST00000338895 ATP7AQ04656 1500 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms