RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
PCDH8-201ENST00000338862 MAGI3Q5TCQ9 1506 aa18.31■□□□□ 0.52
PCDH8-201ENST00000338862 ARID4BQ4LE39 1312 aaPredicted RBP18.3■□□□□ 0.52
PCDH8-201ENST00000338862 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
PCDH8-201ENST00000338862 KIAA1107Q9UPP5 1409 aa18.3■□□□□ 0.52
PCDH8-201ENST00000338862 MS4A1P11836 297 aa18.3■□□□□ 0.52
PCDH8-201ENST00000338862 FAM161AQ3B820 660 aa18.3■□□□□ 0.52
PCDH8-201ENST00000338862 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
PCDH8-201ENST00000338862 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
PCDH8-201ENST00000338862 PANK1Q8TE04 598 aa18.27■□□□□ 0.52
PCDH8-201ENST00000338862 USP35Q9P2H5 1018 aa18.27■□□□□ 0.52
PCDH8-201ENST00000338862 MIA2Q96PC5 1412 aa18.27■□□□□ 0.51
PCDH8-201ENST00000338862 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
PCDH8-201ENST00000338862 DENND4BO75064 1496 aaPredicted RBP18.26■□□□□ 0.51
PCDH8-201ENST00000338862 SAFB2Q14151 953 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCDH8-201ENST00000338862 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
PCDH8-201ENST00000338862 CENPQQ7L2Z9 268 aaPredicted RBP18.25■□□□□ 0.51
PCDH8-201ENST00000338862 CCDC144AA2RUR9 1427 aa18.25■□□□□ 0.51
PCDH8-201ENST00000338862 BECN1Q14457 450 aa18.24■□□□□ 0.51
PCDH8-201ENST00000338862 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
PCDH8-201ENST00000338862 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
PCDH8-201ENST00000338862 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
PCDH8-201ENST00000338862 SPATA31E1Q6ZUB1 1445 aa18.2■□□□□ 0.5
PCDH8-201ENST00000338862 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
PCDH8-201ENST00000338862 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
PCDH8-201ENST00000338862 TEX14Q8IWB6 1497 aa18.19■□□□□ 0.5
PCDH8-201ENST00000338862 NAP1L5Q96NT1 182 aaPredicted RBP18.18■□□□□ 0.5
PCDH8-201ENST00000338862 PLB1Q6P1J6 1458 aa18.18■□□□□ 0.5
PCDH8-201ENST00000338862 FTSJ3Q8IY81 847 aaKnown RBP18.18■□□□□ 0.5
PCDH8-201ENST00000338862 MFAP1P55081 439 aaKnown RBP18.17■□□□□ 0.5
PCDH8-201ENST00000338862 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
PCDH8-201ENST00000338862 U2SURPO15042 1029 aaKnown RBP18.17■□□□□ 0.5
PCDH8-201ENST00000338862 ROCK1Q13464 1354 aa18.16■□□□□ 0.5
PCDH8-201ENST00000338862 POGKQ9P215 609 aa18.16■□□□□ 0.5
PCDH8-201ENST00000338862 HECW1Q76N89 1606 aa18.15■□□□□ 0.5
PCDH8-201ENST00000338862 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
PCDH8-201ENST00000338862 MORC1Q86VD1 984 aa18.14■□□□□ 0.5
PCDH8-201ENST00000338862 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
PCDH8-201ENST00000338862 CUL7Q14999 1698 aa18.13■□□□□ 0.49
PCDH8-201ENST00000338862 CDCA8Q53HL2 280 aa18.13■□□□□ 0.49
PCDH8-201ENST00000338862 CAMSAP2Q08AD1 1489 aa18.13■□□□□ 0.49
PCDH8-201ENST00000338862 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
PCDH8-201ENST00000338862 C9orf84Q5VXU9 1444 aa18.12■□□□□ 0.49
PCDH8-201ENST00000338862 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
PCDH8-201ENST00000338862 TRAK1Q9UPV9 953 aa18.11■□□□□ 0.49
PCDH8-201ENST00000338862 CTTNBP2Q8WZ74 1663 aa18.11■□□□□ 0.49
PCDH8-201ENST00000338862 PZPP20742 1482 aa18.11■□□□□ 0.49
PCDH8-201ENST00000338862 IGHDP01880 384 aa18.11■□□□□ 0.49
PCDH8-201ENST00000338862 PER1O15534 1290 aaPredicted RBP18.1■□□□□ 0.49
PCDH8-201ENST00000338862 U2AF1L5P0DN76 240 aaPredicted RBP18.1■□□□□ 0.49
PCDH8-201ENST00000338862 U2AF1Q01081 240 aaKnown RBP eCLIP18.1■□□□□ 0.49
PCDH8-201ENST00000338862 TROQ12816 1431 aaPredicted RBP18.1■□□□□ 0.49
PCDH8-201ENST00000338862 SEC24BO95487 1268 aa18.09■□□□□ 0.49
PCDH8-201ENST00000338862 IQGAP2Q13576 1575 aa18.09■□□□□ 0.49
PCDH8-201ENST00000338862 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.49
PCDH8-201ENST00000338862 TPRNQ4KMQ1 711 aa18.08■□□□□ 0.48
PCDH8-201ENST00000338862 CARMIL2Q6F5E8 1435 aa18.08■□□□□ 0.48
PCDH8-201ENST00000338862 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
PCDH8-201ENST00000338862 C8orf34Q49A92 452 aa18.07■□□□□ 0.48
PCDH8-201ENST00000338862 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
PCDH8-201ENST00000338862 CFAP70Q5T0N1 1121 aa18.07■□□□□ 0.48
PCDH8-201ENST00000338862 TNNQ9UQP3 1299 aa18.07■□□□□ 0.48
PCDH8-201ENST00000338862 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
PCDH8-201ENST00000338862 ITPRIPQ8IWB1 547 aa18.06■□□□□ 0.48
PCDH8-201ENST00000338862 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
PCDH8-201ENST00000338862 KIF3BO15066 747 aa18.05■□□□□ 0.48
PCDH8-201ENST00000338862 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
PCDH8-201ENST00000338862 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
PCDH8-201ENST00000338862 NCLP19338 710 aaKnown RBP18.04■□□□□ 0.48
PCDH8-201ENST00000338862 STK26Q9P289 416 aa18.04■□□□□ 0.48
PCDH8-201ENST00000338862 E9PSI1 815 aa18.03■□□□□ 0.48
PCDH8-201ENST00000338862 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
PCDH8-201ENST00000338862 ZBTB7CA1YPR0 619 aa18.03■□□□□ 0.48
PCDH8-201ENST00000338862 TESK2Q96S53 571 aa18.03■□□□□ 0.48
PCDH8-201ENST00000338862 NUP153P49790 1475 aaKnown RBP18.03■□□□□ 0.48
PCDH8-201ENST00000338862 AFAP1Q8N556 730 aa18.02■□□□□ 0.48
PCDH8-201ENST00000338862 GPATCH8Q9UKJ3 1502 aaKnown RBP18.02■□□□□ 0.48
PCDH8-201ENST00000338862 ERBINQ96RT1 1412 aa18.02■□□□□ 0.48
PCDH8-201ENST00000338862 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
PCDH8-201ENST00000338862 TMEM132EQ6IEE7 984 aa18■□□□□ 0.47
PCDH8-201ENST00000338862 SMC4Q9NTJ3 1288 aa18■□□□□ 0.47
PCDH8-201ENST00000338862 PARD3Q8TEW0 1356 aa18■□□□□ 0.47
PCDH8-201ENST00000338862 ELL2O00472 640 aaPredicted RBP18■□□□□ 0.47
PCDH8-201ENST00000338862 BCORL1Q5H9F3 1711 aa18■□□□□ 0.47
PCDH8-201ENST00000338862 APBB1O00213 710 aa18■□□□□ 0.47
PCDH8-201ENST00000338862 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
PCDH8-201ENST00000338862 GGT6Q6P531 493 aa17.99■□□□□ 0.47
PCDH8-201ENST00000338862 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
PCDH8-201ENST00000338862 PDZRN3Q9UPQ7 1066 aa17.99■□□□□ 0.47
PCDH8-201ENST00000338862 TSR2Q969E8 191 aaKnown RBP17.99■□□□□ 0.47
PCDH8-201ENST00000338862 TRIM44Q96DX7 344 aaPredicted RBP17.99■□□□□ 0.47
PCDH8-201ENST00000338862 GOLGA6L3A6NEY3 463 aa17.98■□□□□ 0.47
PCDH8-201ENST00000338862 ARID3AQ99856 593 aa17.98■□□□□ 0.47
PCDH8-201ENST00000338862 SLC12A5Q9H2X9 1139 aa17.98■□□□□ 0.47
PCDH8-201ENST00000338862 TCP11L2Q8N4U5 519 aa17.98■□□□□ 0.47
PCDH8-201ENST00000338862 HSP90AB1P08238 724 aaKnown RBP17.98■□□□□ 0.47
PCDH8-201ENST00000338862 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
PCDH8-201ENST00000338862 CGNL1Q0VF96 1302 aa17.96■□□□□ 0.47
PCDH8-201ENST00000338862 SAMD9Q5K651 1589 aa17.96■□□□□ 0.47
PCDH8-201ENST00000338862 HSCBQ8IWL3 235 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms