RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 FAM135AQ9P2D6 1515 aa26.92■■□□□ 1.9
CDCA4-201ENST00000336219 NOP58Q9Y2X3 529 aaKnown RBP26.91■■□□□ 1.9
CDCA4-201ENST00000336219 NBR1Q14596 966 aa26.9■■□□□ 1.9
CDCA4-201ENST00000336219 KDM2AQ9Y2K7 1162 aa26.9■■□□□ 1.9
CDCA4-201ENST00000336219 DCAF11Q8TEB1 546 aa26.89■■□□□ 1.9
CDCA4-201ENST00000336219 DEKP35659 375 aaKnown RBP26.89■■□□□ 1.89
CDCA4-201ENST00000336219 E9PCH4 1651 aa26.89■■□□□ 1.89
CDCA4-201ENST00000336219 ST20-MTHFSA0A0A6YYL1 179 aa26.88■■□□□ 1.89
CDCA4-201ENST00000336219 CCDC136Q96JN2 1154 aa26.88■■□□□ 1.89
CDCA4-201ENST00000336219 PNISRQ8TF01 805 aaKnown RBP26.87■■□□□ 1.89
CDCA4-201ENST00000336219 RSPH4AQ5TD94 716 aa26.86■■□□□ 1.89
CDCA4-201ENST00000336219 RNF123Q5XPI4 1314 aa26.84■■□□□ 1.89
CDCA4-201ENST00000336219 TRPM1Q7Z4N2 1603 aa26.83■■□□□ 1.89
CDCA4-201ENST00000336219 MAST1Q9Y2H9 1570 aa26.83■■□□□ 1.89
CDCA4-201ENST00000336219 SYCP2Q9BX26 1530 aa26.82■■□□□ 1.88
CDCA4-201ENST00000336219 UNC13BO14795 1591 aa26.82■■□□□ 1.88
CDCA4-201ENST00000336219 TMC1Q8TDI8 760 aa26.82■■□□□ 1.88
CDCA4-201ENST00000336219 KTN1Q86UP2 1357 aaKnown RBP26.81■■□□□ 1.88
CDCA4-201ENST00000336219 TTC37Q6PGP7 1564 aa26.81■■□□□ 1.88
CDCA4-201ENST00000336219 CCDC144AA2RUR9 1427 aa26.8■■□□□ 1.88
CDCA4-201ENST00000336219 PRAG1Q86YV5 1406 aa26.79■■□□□ 1.88
CDCA4-201ENST00000336219 CHD1O14646 1710 aa26.79■■□□□ 1.88
CDCA4-201ENST00000336219 LRPPRCP42704 1394 aaKnown RBP26.78■■□□□ 1.88
CDCA4-201ENST00000336219 ARHGAP5Q13017 1502 aa26.77■■□□□ 1.88
CDCA4-201ENST00000336219 BRD4O60885 1362 aaPredicted RBP26.77■■□□□ 1.88
CDCA4-201ENST00000336219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.77■■□□□ 1.886e-6■■■■■ 38.2
CDCA4-201ENST00000336219 MYBBP1AQ9BQG0 1328 aaKnown RBP26.76■■□□□ 1.87
CDCA4-201ENST00000336219 RALBP1Q15311 655 aa26.76■■□□□ 1.87
CDCA4-201ENST00000336219 SHROOM2Q13796 1616 aa26.75■■□□□ 1.87
CDCA4-201ENST00000336219 PLA2R1Q13018 1463 aa26.74■■□□□ 1.87
CDCA4-201ENST00000336219 PLXNC1O60486 1568 aa26.74■■□□□ 1.87
CDCA4-201ENST00000336219 MYT1LQ9UL68 1186 aa26.73■■□□□ 1.87
CDCA4-201ENST00000336219 MYO5CQ9NQX4 1742 aa26.73■■□□□ 1.87
CDCA4-201ENST00000336219 IQGAP3Q86VI3 1631 aa26.73■■□□□ 1.87
CDCA4-201ENST00000336219 A2MP01023 1474 aa26.7■■□□□ 1.87
CDCA4-201ENST00000336219 LAMC1P11047 1609 aa26.7■■□□□ 1.87
CDCA4-201ENST00000336219 GPRASP1Q5JY77 1395 aa26.7■■□□□ 1.86
CDCA4-201ENST00000336219 ANP32AP39687 249 aaKnown RBP26.7■■□□□ 1.86
CDCA4-201ENST00000336219 IPO9Q96P70 1041 aaKnown RBP26.69■■□□□ 1.86
CDCA4-201ENST00000336219 SALL2Q9Y467 1007 aaPredicted RBP26.69■■□□□ 1.86
CDCA4-201ENST00000336219 PLEKHH2Q8IVE3 1493 aa26.67■■□□□ 1.86
CDCA4-201ENST00000336219 RGL3Q3MIN7 710 aa26.67■■□□□ 1.86
CDCA4-201ENST00000336219 NBPF1Q3BBV0 1214 aa26.66■■□□□ 1.86
CDCA4-201ENST00000336219 PRDM15P57071 1507 aaPredicted RBP26.66■■□□□ 1.86
CDCA4-201ENST00000336219 ABCC2Q92887 1545 aa26.66■■□□□ 1.86
CDCA4-201ENST00000336219 PARD3Q8TEW0 1356 aa26.66■■□□□ 1.86
CDCA4-201ENST00000336219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.65■■□□□ 1.86
CDCA4-201ENST00000336219 DUOX2Q9NRD8 1548 aa26.63■■□□□ 1.85
CDCA4-201ENST00000336219 COL17A1Q9UMD9 1497 aaPredicted RBP26.63■■□□□ 1.85
CDCA4-201ENST00000336219 EIF2AK4Q9P2K8 1649 aaKnown RBP26.63■■□□□ 1.85
CDCA4-201ENST00000336219 EXOC6Q8TAG9 804 aa26.63■■□□□ 1.85
CDCA4-201ENST00000336219 MAGI2Q86UL8 1455 aa26.63■■□□□ 1.85
CDCA4-201ENST00000336219 ZBTB47Q9UFB7 747 aaPredicted RBP26.62■■□□□ 1.85
CDCA4-201ENST00000336219 ATP10AO60312 1499 aa26.61■■□□□ 1.85
CDCA4-201ENST00000336219 ERCC6L2Q5T890 1561 aa26.61■■□□□ 1.85
CDCA4-201ENST00000336219 NLRP13Q86W25 1043 aa26.61■■□□□ 1.85
CDCA4-201ENST00000336219 PER1O15534 1290 aaPredicted RBP26.6■■□□□ 1.85
CDCA4-201ENST00000336219 RRP1P56182 461 aaKnown RBP26.59■■□□□ 1.85
CDCA4-201ENST00000336219 NPM2Q86SE8 214 aaKnown RBP26.59■■□□□ 1.85
CDCA4-201ENST00000336219 ERBINQ96RT1 1412 aa26.58■■□□□ 1.85
CDCA4-201ENST00000336219 TESK2Q96S53 571 aa26.57■■□□□ 1.84
CDCA4-201ENST00000336219 DISP3Q9P2K9 1392 aa26.56■■□□□ 1.84
CDCA4-201ENST00000336219 WASHC2CQ9Y4E1 1318 aa26.53■■□□□ 1.84
CDCA4-201ENST00000336219 PLCH2O75038 1416 aa26.53■■□□□ 1.84
CDCA4-201ENST00000336219 RNF17Q9BXT8 1623 aaKnown RBP26.53■■□□□ 1.84
CDCA4-201ENST00000336219 RCAN3Q9UKA8 241 aa26.53■■□□□ 1.84
CDCA4-201ENST00000336219 ZCCHC11Q5TAX3 1644 aaKnown RBP26.51■■□□□ 1.83
CDCA4-201ENST00000336219 ABCC1P33527 1531 aa26.5■■□□□ 1.83
CDCA4-201ENST00000336219 RTL5Q5HYW3 569 aaPredicted RBP26.48■■□□□ 1.83
CDCA4-201ENST00000336219 CDCA7LQ96GN5 454 aa26.48■■□□□ 1.83
CDCA4-201ENST00000336219 PDE3BQ13370 1112 aa26.47■■□□□ 1.83
CDCA4-201ENST00000336219 TMF1P82094 1093 aa26.46■■□□□ 1.83
CDCA4-201ENST00000336219 EFCAB2Q5VUJ9 269 aa26.45■■□□□ 1.83
CDCA4-201ENST00000336219 PANK3Q9H999 370 aa26.45■■□□□ 1.83
CDCA4-201ENST00000336219 ZMYM4Q5VZL5 1548 aa26.45■■□□□ 1.83
CDCA4-201ENST00000336219 SKAP1Q86WV1 359 aa26.45■■□□□ 1.82
CDCA4-201ENST00000336219 INSRP06213 1382 aa26.45■■□□□ 1.82
CDCA4-201ENST00000336219 CC2D1BQ5T0F9 858 aaKnown RBP26.44■■□□□ 1.82
CDCA4-201ENST00000336219 PDE4AP27815 886 aa26.44■■□□□ 1.82
CDCA4-201ENST00000336219 TRAPPC8Q9Y2L5 1435 aa26.43■■□□□ 1.82
CDCA4-201ENST00000336219 PLIN1O60240 522 aa26.43■■□□□ 1.82
CDCA4-201ENST00000336219 BLMP54132 1417 aaPredicted RBP26.43■■□□□ 1.82
CDCA4-201ENST00000336219 LAS1LQ9Y4W2 734 aaKnown RBP26.42■■□□□ 1.82
CDCA4-201ENST00000336219 UHRF1BP1LA0JNW5 1464 aa26.42■■□□□ 1.82
CDCA4-201ENST00000336219 MADDQ8WXG6 1647 aa26.41■■□□□ 1.82
CDCA4-201ENST00000336219 TCERG1O14776 1098 aaKnown RBP26.4■■□□□ 1.82
CDCA4-201ENST00000336219 IQGAP1P46940 1657 aa26.4■■□□□ 1.82
CDCA4-201ENST00000336219 CEP152O94986 1710 aa26.37■■□□□ 1.81
CDCA4-201ENST00000336219 TRPM2O94759 1503 aa26.37■■□□□ 1.81
CDCA4-201ENST00000336219 SPHKAPQ2M3C7 1700 aa26.37■■□□□ 1.81
CDCA4-201ENST00000336219 BACH2Q9BYV9 841 aa26.36■■□□□ 1.81
CDCA4-201ENST00000336219 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
CDCA4-201ENST00000336219 WDR7Q9Y4E6 1490 aa26.35■■□□□ 1.81
CDCA4-201ENST00000336219 ZFYVE16Q7Z3T8 1539 aa26.34■■□□□ 1.81
CDCA4-201ENST00000336219 RTEL1-TNFRSF6BF6WH68 1400 aa26.34■■□□□ 1.81
CDCA4-201ENST00000336219 ARAP3Q8WWN8 1544 aa26.33■■□□□ 1.81
CDCA4-201ENST00000336219 SPAG9O60271 1321 aaKnown RBP26.33■■□□□ 1.8
CDCA4-201ENST00000336219 DEPDC5O75140 1603 aa26.32■■□□□ 1.8
CDCA4-201ENST00000336219 CRBNQ96SW2 442 aa26.31■■□□□ 1.8
CDCA4-201ENST00000336219 PTPRTO14522 1441 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms