RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
TRAPPC11-201ENST00000334690 STK31Q9BXU1 1019 aa21.5■■□□□ 1.03
TRAPPC11-201ENST00000334690 E9PSI1 815 aa21.5■■□□□ 1.03
TRAPPC11-201ENST00000334690 KIAA1211Q6ZU35 1233 aa21.5■■□□□ 1.03
TRAPPC11-201ENST00000334690 NRDCO43847 1150 aa21.5■■□□□ 1.03
TRAPPC11-201ENST00000334690 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
TRAPPC11-201ENST00000334690 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
TRAPPC11-201ENST00000334690 HMMRO75330 724 aa21.48■■□□□ 1.03
TRAPPC11-201ENST00000334690 GOLGA6L6A8MZA4 724 aa21.47■■□□□ 1.03
TRAPPC11-201ENST00000334690 VGFO15240 615 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC11-201ENST00000334690 CGNL1Q0VF96 1302 aa21.47■■□□□ 1.03
TRAPPC11-201ENST00000334690 KIF7Q2M1P5 1343 aa21.47■■□□□ 1.03
TRAPPC11-201ENST00000334690 FYCO1Q9BQS8 1478 aa21.46■■□□□ 1.03
TRAPPC11-201ENST00000334690 MSNP26038 577 aaKnown RBP21.46■■□□□ 1.03
TRAPPC11-201ENST00000334690 MFAP1P55081 439 aaKnown RBP21.46■■□□□ 1.03
TRAPPC11-201ENST00000334690 PDE4AP27815 886 aa21.46■■□□□ 1.03
TRAPPC11-201ENST00000334690 EXOC6Q8TAG9 804 aa21.45■■□□□ 1.02
TRAPPC11-201ENST00000334690 USP35Q9P2H5 1018 aa21.45■■□□□ 1.02
TRAPPC11-201ENST00000334690 HDAC5Q9UQL6 1122 aa21.45■■□□□ 1.02
TRAPPC11-201ENST00000334690 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC11-201ENST00000334690 NCOA2Q15596 1464 aa21.44■■□□□ 1.02
TRAPPC11-201ENST00000334690 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC11-201ENST00000334690 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
TRAPPC11-201ENST00000334690 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
TRAPPC11-201ENST00000334690 FANCIQ9NVI1 1328 aa21.43■■□□□ 1.02
TRAPPC11-201ENST00000334690 EVC2Q86UK5 1308 aa21.42■■□□□ 1.02
TRAPPC11-201ENST00000334690 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
TRAPPC11-201ENST00000334690 PAK3O75914 559 aaPredicted RBP21.42■■□□□ 1.02
TRAPPC11-201ENST00000334690 NUTM2DQ5VT03 806 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC11-201ENST00000334690 CFTRP13569 1480 aa21.41■■□□□ 1.02
TRAPPC11-201ENST00000334690 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
TRAPPC11-201ENST00000334690 ANKRD50Q9ULJ7 1429 aa21.41■■□□□ 1.02
TRAPPC11-201ENST00000334690 PLIN1O60240 522 aa21.4■■□□□ 1.02
TRAPPC11-201ENST00000334690 RRP7AQ9Y3A4 280 aaKnown RBP21.4■■□□□ 1.02
TRAPPC11-201ENST00000334690 APAF1O14727 1248 aa21.4■■□□□ 1.02
TRAPPC11-201ENST00000334690 MIA2Q96PC5 1412 aa21.4■■□□□ 1.02
TRAPPC11-201ENST00000334690 CRBNQ96SW2 442 aa21.39■■□□□ 1.01
TRAPPC11-201ENST00000334690 CHAF1AQ13111 956 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC11-201ENST00000334690 ZKSCAN2Q63HK3 967 aa21.38■■□□□ 1.01
TRAPPC11-201ENST00000334690 GZF1Q9H116 711 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC11-201ENST00000334690 EID1Q9Y6B2 187 aa21.38■■□□□ 1.01
TRAPPC11-201ENST00000334690 WASHC2AQ641Q2 1341 aa21.37■■□□□ 1.01
TRAPPC11-201ENST00000334690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.36■■□□□ 1.01
TRAPPC11-201ENST00000334690 TRHP20396 242 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC11-201ENST00000334690 NGDNQ8NEJ9 315 aaKnown RBP21.35■■□□□ 1.01
TRAPPC11-201ENST00000334690 SYAP1Q96A49 352 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC11-201ENST00000334690 GOLGA6L3A6NEY3 463 aa21.34■■□□□ 1.01
TRAPPC11-201ENST00000334690 AMPHP49418 695 aa21.33■■□□□ 1
TRAPPC11-201ENST00000334690 SLC4A10Q6U841 1118 aa21.33■■□□□ 1
TRAPPC11-201ENST00000334690 BCL2L13Q9BXK5 485 aa21.33■■□□□ 1
TRAPPC11-201ENST00000334690 TAOK2Q9UL54 1235 aa21.32■■□□□ 1
TRAPPC11-201ENST00000334690 COG6Q9Y2V7 657 aa21.32■■□□□ 1
TRAPPC11-201ENST00000334690 NPHP1O15259 732 aa21.32■■□□□ 1
TRAPPC11-201ENST00000334690 BRD4O60885 1362 aaPredicted RBP21.31■■□□□ 1
TRAPPC11-201ENST00000334690 GPATCH3Q96I76 525 aa21.3■■□□□ 1
TRAPPC11-201ENST00000334690 EFCAB5A4FU69 1503 aa21.3■■□□□ 1
TRAPPC11-201ENST00000334690 TRIM6-TRIM34B2RNG4 842 aa21.3■■□□□ 1
TRAPPC11-201ENST00000334690 HTATSF1O43719 755 aaKnown RBP21.3■■□□□ 1
TRAPPC11-201ENST00000334690 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 14e-6■■■□□ 18.2
TRAPPC11-201ENST00000334690 ST18O60284 1047 aa21.29■■□□□ 1
TRAPPC11-201ENST00000334690 CSB-PGBD3P0DP91 1061 aa21.28■■□□□ 1
TRAPPC11-201ENST00000334690 TOP2BQ02880 1626 aa21.28■■□□□ 1
TRAPPC11-201ENST00000334690 COG3Q96JB2 828 aa21.28■■□□□ 1
TRAPPC11-201ENST00000334690 GRIN2BQ13224 1484 aa21.27■■□□□ 1
TRAPPC11-201ENST00000334690 KIAA2012Q0VF49 1180 aa21.27■■□□□ 1
TRAPPC11-201ENST00000334690 DDX19BQ9UMR2 479 aa21.26■□□□□ 0.99
TRAPPC11-201ENST00000334690 DRC7Q8IY82 874 aa21.26■□□□□ 0.99
TRAPPC11-201ENST00000334690 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
TRAPPC11-201ENST00000334690 ELL2O00472 640 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC11-201ENST00000334690 RUNDC1Q96C34 613 aa21.24■□□□□ 0.99
TRAPPC11-201ENST00000334690 DDX11L8A8MPP1 907 aa21.24■□□□□ 0.99
TRAPPC11-201ENST00000334690 AAMPQ13685 434 aa21.24■□□□□ 0.99
TRAPPC11-201ENST00000334690 MINK1Q8N4C8 1332 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC11-201ENST00000334690 DIAPH1O60610 1272 aaKnown RBP21.23■□□□□ 0.99
TRAPPC11-201ENST00000334690 ANKRD45Q5TZF3 282 aa21.23■□□□□ 0.99
TRAPPC11-201ENST00000334690 DZIP1LQ8IYY4 767 aaKnown RBP21.22■□□□□ 0.99
TRAPPC11-201ENST00000334690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.21■□□□□ 0.99
TRAPPC11-201ENST00000334690 GNL2Q13823 731 aaKnown RBP21.21■□□□□ 0.99
TRAPPC11-201ENST00000334690 NUTM2FA1L443 756 aa21.2■□□□□ 0.98
TRAPPC11-201ENST00000334690 CSPP1Q1MSJ5 1256 aa21.2■□□□□ 0.98
TRAPPC11-201ENST00000334690 EHBP1L1Q8N3D4 1523 aa21.18■□□□□ 0.98
TRAPPC11-201ENST00000334690 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
TRAPPC11-201ENST00000334690 API5Q9BZZ5 524 aaKnown RBP21.18■□□□□ 0.98
TRAPPC11-201ENST00000334690 SLC4A3P48751 1232 aa21.18■□□□□ 0.98
TRAPPC11-201ENST00000334690 GSE1Q14687 1217 aa21.17■□□□□ 0.98
TRAPPC11-201ENST00000334690 HMGXB3Q12766 1538 aa21.17■□□□□ 0.98
TRAPPC11-201ENST00000334690 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
TRAPPC11-201ENST00000334690 RIPK4P57078 832 aa21.17■□□□□ 0.98
TRAPPC11-201ENST00000334690 LTV1Q96GA3 475 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC11-201ENST00000334690 GORABQ5T7V8 394 aa21.17■□□□□ 0.98
TRAPPC11-201ENST00000334690 KIF16BQ96L93 1317 aa21.16■□□□□ 0.98
TRAPPC11-201ENST00000334690 FOXD4L1Q9NU39 408 aa21.16■□□□□ 0.98
TRAPPC11-201ENST00000334690 KIAA1107Q9UPP5 1409 aa21.15■□□□□ 0.98
TRAPPC11-201ENST00000334690 ADAMTS8Q9UP79 889 aa21.14■□□□□ 0.98
TRAPPC11-201ENST00000334690 ZNF330Q9Y3S2 320 aaPredicted RBP21.14■□□□□ 0.97
TRAPPC11-201ENST00000334690 SKOR2Q2VWA4 1001 aaPredicted RBP21.14■□□□□ 0.97
TRAPPC11-201ENST00000334690 PHF14O94880 888 aa21.14■□□□□ 0.97
TRAPPC11-201ENST00000334690 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
TRAPPC11-201ENST00000334690 NBPF8Q3BBV2 869 aa21.13■□□□□ 0.97
TRAPPC11-201ENST00000334690 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms