RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 CCDC7Q96M83 1385 aa17.8■□□□□ 0.44
PRKD1-201ENST00000331968 MAGI3Q5TCQ9 1506 aa17.78■□□□□ 0.44
PRKD1-201ENST00000331968 MIA2Q96PC5 1412 aa17.78■□□□□ 0.44
PRKD1-201ENST00000331968 SLC4A3P48751 1232 aa17.77■□□□□ 0.44
PRKD1-201ENST00000331968 RGS3P49796 1198 aa17.77■□□□□ 0.44
PRKD1-201ENST00000331968 C14orf37Q86TY3 774 aa17.77■□□□□ 0.44
PRKD1-201ENST00000331968 U2SURPO15042 1029 aaKnown RBP17.77■□□□□ 0.43
PRKD1-201ENST00000331968 ATP10BO94823 1461 aa17.76■□□□□ 0.43
PRKD1-201ENST00000331968 CAMSAP2Q08AD1 1489 aa17.76■□□□□ 0.43
PRKD1-201ENST00000331968 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
PRKD1-201ENST00000331968 PLIN1O60240 522 aa17.75■□□□□ 0.43
PRKD1-201ENST00000331968 NCOA1Q15788 1441 aa17.75■□□□□ 0.43
PRKD1-201ENST00000331968 ANKRD30BQ9BXX2 1392 aa17.74■□□□□ 0.43
PRKD1-201ENST00000331968 GPATCH8Q9UKJ3 1502 aaKnown RBP17.73■□□□□ 0.43
PRKD1-201ENST00000331968 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
PRKD1-201ENST00000331968 DISP1Q96F81 1524 aa17.73■□□□□ 0.43
PRKD1-201ENST00000331968 EIF4G3O43432 1585 aaKnown RBP17.73■□□□□ 0.43
PRKD1-201ENST00000331968 CTTNBP2Q8WZ74 1663 aa17.73■□□□□ 0.43
PRKD1-201ENST00000331968 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
PRKD1-201ENST00000331968 FRAT1Q92837 279 aaPredicted RBP17.71■□□□□ 0.43
PRKD1-201ENST00000331968 SKAP1Q86WV1 359 aa17.71■□□□□ 0.43
PRKD1-201ENST00000331968 ADAMTS12P58397 1594 aa17.71■□□□□ 0.42
PRKD1-201ENST00000331968 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
PRKD1-201ENST00000331968 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
PRKD1-201ENST00000331968 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
PRKD1-201ENST00000331968 MORC1Q86VD1 984 aa17.69■□□□□ 0.42
PRKD1-201ENST00000331968 KIAA1107Q9UPP5 1409 aa17.68■□□□□ 0.42
PRKD1-201ENST00000331968 EXOC6Q8TAG9 804 aa17.68■□□□□ 0.42
PRKD1-201ENST00000331968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRKD1-201ENST00000331968 MINK1Q8N4C8 1332 aaPredicted RBP17.68■□□□□ 0.42
PRKD1-201ENST00000331968 KTN1Q86UP2 1357 aaKnown RBP17.67■□□□□ 0.42
PRKD1-201ENST00000331968 UGGT2Q9NYU1 1516 aa17.67■□□□□ 0.42
PRKD1-201ENST00000331968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.67■□□□□ 0.42
PRKD1-201ENST00000331968 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
PRKD1-201ENST00000331968 IPO9Q96P70 1041 aaKnown RBP17.66■□□□□ 0.42
PRKD1-201ENST00000331968 PLEKHH2Q8IVE3 1493 aa17.66■□□□□ 0.42
PRKD1-201ENST00000331968 CDCA8Q53HL2 280 aa17.65■□□□□ 0.42
PRKD1-201ENST00000331968 AKNAQ7Z591 1439 aa17.65■□□□□ 0.42
PRKD1-201ENST00000331968 LMOD2Q6P5Q4 547 aa17.64■□□□□ 0.42
PRKD1-201ENST00000331968 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
PRKD1-201ENST00000331968 ANO8Q9HCE9 1232 aaPredicted RBP17.64■□□□□ 0.41
PRKD1-201ENST00000331968 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
PRKD1-201ENST00000331968 KIAA0556O60303 1618 aa17.61■□□□□ 0.41
PRKD1-201ENST00000331968 NLRP13Q86W25 1043 aa17.61■□□□□ 0.41
PRKD1-201ENST00000331968 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
PRKD1-201ENST00000331968 WDR62O43379 1518 aa17.61■□□□□ 0.41
PRKD1-201ENST00000331968 CABP2Q9NPB3 220 aa17.6■□□□□ 0.41
PRKD1-201ENST00000331968 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
PRKD1-201ENST00000331968 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
PRKD1-201ENST00000331968 U2AF1L5P0DN76 240 aaPredicted RBP17.6■□□□□ 0.41
PRKD1-201ENST00000331968 U2AF1Q01081 240 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRKD1-201ENST00000331968 RCAN3Q9UKA8 241 aa17.6■□□□□ 0.41
PRKD1-201ENST00000331968 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
PRKD1-201ENST00000331968 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
PRKD1-201ENST00000331968 SPRYD3Q8NCJ5 442 aa17.58■□□□□ 0.4
PRKD1-201ENST00000331968 ZBED9Q6R2W3 1325 aa17.58■□□□□ 0.4
PRKD1-201ENST00000331968 KDM6BO15054 1643 aa17.57■□□□□ 0.4
PRKD1-201ENST00000331968 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
PRKD1-201ENST00000331968 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
PRKD1-201ENST00000331968 APAF1O14727 1248 aa17.57■□□□□ 0.4
PRKD1-201ENST00000331968 RALBP1Q15311 655 aa17.57■□□□□ 0.4
PRKD1-201ENST00000331968 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
PRKD1-201ENST00000331968 ROCK1Q13464 1354 aa17.56■□□□□ 0.4
PRKD1-201ENST00000331968 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
PRKD1-201ENST00000331968 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
PRKD1-201ENST00000331968 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
PRKD1-201ENST00000331968 KIF14Q15058 1648 aa17.55■□□□□ 0.4
PRKD1-201ENST00000331968 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
PRKD1-201ENST00000331968 TRAPPC8Q9Y2L5 1435 aa17.53■□□□□ 0.4
PRKD1-201ENST00000331968 PDE4AP27815 886 aa17.53■□□□□ 0.4
PRKD1-201ENST00000331968 GGNBP2Q9H3C7 697 aa17.53■□□□□ 0.4
PRKD1-201ENST00000331968 CCDC141Q6ZP82 1450 aa17.52■□□□□ 0.39
PRKD1-201ENST00000331968 CFAP53Q96M91 514 aa17.52■□□□□ 0.39
PRKD1-201ENST00000331968 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
PRKD1-201ENST00000331968 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
PRKD1-201ENST00000331968 RPRD2Q5VT52 1461 aaKnown RBP17.49■□□□□ 0.39
PRKD1-201ENST00000331968 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
PRKD1-201ENST00000331968 ERICH6BQ5W0A0 696 aa17.49■□□□□ 0.39
PRKD1-201ENST00000331968 NUP160Q12769 1436 aa17.49■□□□□ 0.39
PRKD1-201ENST00000331968 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
PRKD1-201ENST00000331968 SYCP2Q9BX26 1530 aa17.48■□□□□ 0.39
PRKD1-201ENST00000331968 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
PRKD1-201ENST00000331968 FBLN1P23142 703 aa17.47■□□□□ 0.39
PRKD1-201ENST00000331968 RBM33Q96EV2 1170 aaKnown RBP17.46■□□□□ 0.39
PRKD1-201ENST00000331968 ERCC6L2Q5T890 1561 aa17.46■□□□□ 0.39
PRKD1-201ENST00000331968 MAPK8IP3Q9UPT6 1336 aa17.45■□□□□ 0.38
PRKD1-201ENST00000331968 CRBNQ96SW2 442 aa17.45■□□□□ 0.38
PRKD1-201ENST00000331968 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
PRKD1-201ENST00000331968 CENPJQ9HC77 1338 aaPredicted RBP17.45■□□□□ 0.38
PRKD1-201ENST00000331968 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
PRKD1-201ENST00000331968 CEBPAP49715 358 aaPredicted RBP17.45■□□□□ 0.38
PRKD1-201ENST00000331968 CD109Q6YHK3 1445 aa17.44■□□□□ 0.38
PRKD1-201ENST00000331968 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
PRKD1-201ENST00000331968 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.44■□□□□ 0.38
PRKD1-201ENST00000331968 IDI1Q13907 227 aa17.43■□□□□ 0.38
PRKD1-201ENST00000331968 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
PRKD1-201ENST00000331968 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
PRKD1-201ENST00000331968 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
PRKD1-201ENST00000331968 TXNDC2Q86VQ3 553 aa17.42■□□□□ 0.38
PRKD1-201ENST00000331968 PRAM1Q96QH2 718 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms