RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
RARB-201ENST00000330688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
RARB-201ENST00000330688 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
RARB-201ENST00000330688 RGL3Q3MIN7 710 aa13.68□□□□□ -0.22
RARB-201ENST00000330688 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
RARB-201ENST00000330688 PPP4R2Q9NY27 417 aa13.67□□□□□ -0.22
RARB-201ENST00000330688 ABCC2Q92887 1545 aa13.67□□□□□ -0.22
RARB-201ENST00000330688 PNISRQ8TF01 805 aaKnown RBP13.67□□□□□ -0.22
RARB-201ENST00000330688 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
RARB-201ENST00000330688 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
RARB-201ENST00000330688 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
RARB-201ENST00000330688 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
RARB-201ENST00000330688 TMC1Q8TDI8 760 aa13.65□□□□□ -0.23
RARB-201ENST00000330688 UNC13BO14795 1591 aa13.64□□□□□ -0.23
RARB-201ENST00000330688 SMG6Q86US8 1419 aaKnown RBP13.63□□□□□ -0.23
RARB-201ENST00000330688 SENP3-EIF4A1A0A087X0R7 540 aa13.63□□□□□ -0.23
RARB-201ENST00000330688 A2MP01023 1474 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 PLCH2O75038 1416 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 PLXNC1O60486 1568 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 B4GALNT3Q6L9W6 998 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 NUDCQ9Y266 331 aa13.62□□□□□ -0.23
RARB-201ENST00000330688 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
RARB-201ENST00000330688 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
RARB-201ENST00000330688 RALBP1Q15311 655 aa13.61□□□□□ -0.23
RARB-201ENST00000330688 GPRASP1Q5JY77 1395 aa13.61□□□□□ -0.23
RARB-201ENST00000330688 MYBBP1AQ9BQG0 1328 aaKnown RBP13.61□□□□□ -0.23
RARB-201ENST00000330688 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
RARB-201ENST00000330688 DUOX2Q9NRD8 1548 aa13.6□□□□□ -0.23
RARB-201ENST00000330688 IQGAP3Q86VI3 1631 aa13.6□□□□□ -0.23
RARB-201ENST00000330688 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
RARB-201ENST00000330688 LRPPRCP42704 1394 aaKnown RBP13.59□□□□□ -0.23
RARB-201ENST00000330688 KTN1Q86UP2 1357 aaKnown RBP13.59□□□□□ -0.23
RARB-201ENST00000330688 ERBINQ96RT1 1412 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
RARB-201ENST00000330688 TESK2Q96S53 571 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 E9PCH4 1651 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 ATP10AO60312 1499 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 MAGI2Q86UL8 1455 aa13.58□□□□□ -0.24
RARB-201ENST00000330688 ZCCHC11Q5TAX3 1644 aaKnown RBP13.57□□□□□ -0.24
RARB-201ENST00000330688 UHRF1BP1LA0JNW5 1464 aa13.56□□□□□ -0.24
RARB-201ENST00000330688 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
RARB-201ENST00000330688 PARD3Q8TEW0 1356 aa13.55□□□□□ -0.24
RARB-201ENST00000330688 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
RARB-201ENST00000330688 ABCC1P33527 1531 aa13.54□□□□□ -0.24
RARB-201ENST00000330688 AFAP1Q8N556 730 aa13.54□□□□□ -0.24
RARB-201ENST00000330688 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
RARB-201ENST00000330688 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
RARB-201ENST00000330688 MSH5O43196 834 aa13.53□□□□□ -0.24
RARB-201ENST00000330688 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
RARB-201ENST00000330688 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.24
RARB-201ENST00000330688 LAMC1P11047 1609 aa13.52□□□□□ -0.25
RARB-201ENST00000330688 FANCIQ9NVI1 1328 aa13.51□□□□□ -0.25
RARB-201ENST00000330688 PANK3Q9H999 370 aa13.51□□□□□ -0.25
RARB-201ENST00000330688 CC2D1BQ5T0F9 858 aaKnown RBP13.5□□□□□ -0.25
RARB-201ENST00000330688 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
RARB-201ENST00000330688 TMF1P82094 1093 aa13.5□□□□□ -0.25
RARB-201ENST00000330688 WASHC2CQ9Y4E1 1318 aa13.49□□□□□ -0.25
RARB-201ENST00000330688 RTEL1-TNFRSF6BF6WH68 1400 aa13.49□□□□□ -0.25
RARB-201ENST00000330688 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
RARB-201ENST00000330688 ZFYVE16Q7Z3T8 1539 aa13.46□□□□□ -0.25
RARB-201ENST00000330688 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.25
RARB-201ENST00000330688 ARAP3Q8WWN8 1544 aa13.45□□□□□ -0.26
RARB-201ENST00000330688 PTPRTO14522 1441 aa13.45□□□□□ -0.26
RARB-201ENST00000330688 RNF17Q9BXT8 1623 aaKnown RBP13.45□□□□□ -0.26
RARB-201ENST00000330688 TRPM2O94759 1503 aa13.44□□□□□ -0.26
RARB-201ENST00000330688 WDR7Q9Y4E6 1490 aa13.43□□□□□ -0.26
RARB-201ENST00000330688 MADDQ8WXG6 1647 aa13.43□□□□□ -0.26
RARB-201ENST00000330688 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
RARB-201ENST00000330688 PDE3BQ13370 1112 aa13.43□□□□□ -0.26
RARB-201ENST00000330688 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
RARB-201ENST00000330688 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
RARB-201ENST00000330688 FANCAO15360 1455 aa13.42□□□□□ -0.26
RARB-201ENST00000330688 KIF3BO15066 747 aa13.42□□□□□ -0.26
RARB-201ENST00000330688 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
RARB-201ENST00000330688 CLTCL1P53675 1640 aa13.41□□□□□ -0.26
RARB-201ENST00000330688 SCAPERQ9BY12 1400 aa13.4□□□□□ -0.26
RARB-201ENST00000330688 MYT1LQ9UL68 1186 aa13.4□□□□□ -0.26
RARB-201ENST00000330688 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
RARB-201ENST00000330688 ATP7AQ04656 1500 aa13.4□□□□□ -0.26
RARB-201ENST00000330688 BLMP54132 1417 aaPredicted RBP13.4□□□□□ -0.26
RARB-201ENST00000330688 INSRP06213 1382 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 KANK1Q14678 1352 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
RARB-201ENST00000330688 SPHKAPQ2M3C7 1700 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 EXOC6Q8TAG9 804 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 ABCA9Q8IUA7 1624 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 VWDEQ8N2E2 1590 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 IQGAP1P46940 1657 aa13.39□□□□□ -0.27
RARB-201ENST00000330688 KNSTRNQ9Y448 316 aa13.38□□□□□ -0.27
RARB-201ENST00000330688 INO80Q9ULG1 1556 aaPredicted RBP13.38□□□□□ -0.27
RARB-201ENST00000330688 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
RARB-201ENST00000330688 ADGRL1O94910 1474 aa13.38□□□□□ -0.27
RARB-201ENST00000330688 TET3O43151 1660 aa13.38□□□□□ -0.27
RARB-201ENST00000330688 CEP152O94986 1710 aa13.37□□□□□ -0.27
RARB-201ENST00000330688 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
RARB-201ENST00000330688 PPP2R1AP30153 589 aa13.37□□□□□ -0.27
RARB-201ENST00000330688 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms