RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 MAP3K1Q13233 1512 aa14.58□□□□□ -0.07
COL4A5-201ENST00000328300 USP47Q96K76 1375 aa14.58□□□□□ -0.08
COL4A5-201ENST00000328300 CGNL1Q0VF96 1302 aa14.57□□□□□ -0.08
COL4A5-201ENST00000328300 OS9Q13438 667 aaPredicted RBP14.57□□□□□ -0.08
COL4A5-201ENST00000328300 SUPT6HQ7KZ85 1726 aaKnown RBP14.57□□□□□ -0.08
COL4A5-201ENST00000328300 NGDNQ8NEJ9 315 aaKnown RBP14.57□□□□□ -0.08
COL4A5-201ENST00000328300 ARXQ96QS3 562 aa14.56□□□□□ -0.08
COL4A5-201ENST00000328300 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
COL4A5-201ENST00000328300 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
COL4A5-201ENST00000328300 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
COL4A5-201ENST00000328300 GOLGA2Q08379 1002 aa14.53□□□□□ -0.08
COL4A5-201ENST00000328300 MCCP23508 829 aa14.53□□□□□ -0.08
COL4A5-201ENST00000328300 C9orf84Q5VXU9 1444 aa14.52□□□□□ -0.08
COL4A5-201ENST00000328300 RWDD1Q9H446 243 aaPredicted RBP14.52□□□□□ -0.08
COL4A5-201ENST00000328300 ST20-MTHFSA0A0A6YYL1 179 aa14.52□□□□□ -0.08
COL4A5-201ENST00000328300 STK31Q9BXU1 1019 aa14.52□□□□□ -0.08
COL4A5-201ENST00000328300 RCAN3Q9UKA8 241 aa14.52□□□□□ -0.09
COL4A5-201ENST00000328300 SCAPERQ9BY12 1400 aa14.52□□□□□ -0.09
COL4A5-201ENST00000328300 NPHP1O15259 732 aa14.52□□□□□ -0.09
COL4A5-201ENST00000328300 ROCK1Q13464 1354 aa14.51□□□□□ -0.09
COL4A5-201ENST00000328300 TRAK1Q9UPV9 953 aa14.51□□□□□ -0.09
COL4A5-201ENST00000328300 GRIN2AQ12879 1464 aa14.51□□□□□ -0.09
COL4A5-201ENST00000328300 PMFBP1Q8TBY8 1022 aa14.5□□□□□ -0.09
COL4A5-201ENST00000328300 COG3Q96JB2 828 aa14.5□□□□□ -0.09
COL4A5-201ENST00000328300 EPRSP07814 1512 aaKnown RBP14.49□□□□□ -0.09
COL4A5-201ENST00000328300 AMPHP49418 695 aa14.49□□□□□ -0.09
COL4A5-201ENST00000328300 CENPJQ9HC77 1338 aaPredicted RBP14.48□□□□□ -0.09
COL4A5-201ENST00000328300 POGZQ7Z3K3 1410 aa14.47□□□□□ -0.09
COL4A5-201ENST00000328300 SOX12O15370 315 aa14.47□□□□□ -0.09
COL4A5-201ENST00000328300 HMMRO75330 724 aa14.47□□□□□ -0.09
COL4A5-201ENST00000328300 KIAA1107Q9UPP5 1409 aa14.47□□□□□ -0.09
COL4A5-201ENST00000328300 UNC13AQ9UPW8 1703 aa14.47□□□□□ -0.09
COL4A5-201ENST00000328300 PANK3Q9H999 370 aa14.47□□□□□ -0.09
COL4A5-201ENST00000328300 RPGRIP1LQ68CZ1 1315 aa14.46□□□□□ -0.09
COL4A5-201ENST00000328300 ZNF644Q9H582 1327 aaPredicted RBP14.46□□□□□ -0.09
COL4A5-201ENST00000328300 ZRSR1Q15695 479 aaKnown RBP14.46□□□□□ -0.09
COL4A5-201ENST00000328300 DAPK1P53355 1430 aa14.45□□□□□ -0.1
COL4A5-201ENST00000328300 RGS3P49796 1198 aa14.44□□□□□ -0.1
COL4A5-201ENST00000328300 URB2Q14146 1524 aaKnown RBP14.44□□□□□ -0.1
COL4A5-201ENST00000328300 SLC52A1Q9NWF4 448 aa14.44□□□□□ -0.1
COL4A5-201ENST00000328300 WASHC2AQ641Q2 1341 aa14.43□□□□□ -0.1
COL4A5-201ENST00000328300 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
COL4A5-201ENST00000328300 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
COL4A5-201ENST00000328300 KIF14Q15058 1648 aa14.43□□□□□ -0.1
COL4A5-201ENST00000328300 THOC2Q8NI27 1593 aaKnown RBP14.42□□□□□ -0.1
COL4A5-201ENST00000328300 CCDC141Q6ZP82 1450 aa14.42□□□□□ -0.1
COL4A5-201ENST00000328300 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
COL4A5-201ENST00000328300 KCNJ4P48050 445 aa14.42□□□□□ -0.1
COL4A5-201ENST00000328300 E9PSI1 815 aa14.42□□□□□ -0.1
COL4A5-201ENST00000328300 CNTLNQ9NXG0 1405 aa14.42□□□□□ -0.1
COL4A5-201ENST00000328300 PTMSP20962 102 aa14.41□□□□□ -0.1
COL4A5-201ENST00000328300 HSCBQ8IWL3 235 aa14.41□□□□□ -0.1
COL4A5-201ENST00000328300 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
COL4A5-201ENST00000328300 TRIM44Q96DX7 344 aaPredicted RBP14.41□□□□□ -0.1
COL4A5-201ENST00000328300 NUTM2DQ5VT03 806 aaPredicted RBP14.4□□□□□ -0.1
COL4A5-201ENST00000328300 CCDC7Q96M83 1385 aa14.4□□□□□ -0.1
COL4A5-201ENST00000328300 SMC4Q9NTJ3 1288 aa14.4□□□□□ -0.1
COL4A5-201ENST00000328300 HSP90AB1P08238 724 aaKnown RBP14.39□□□□□ -0.11
COL4A5-201ENST00000328300 FGD1P98174 961 aa14.39□□□□□ -0.11
COL4A5-201ENST00000328300 ITPRIPQ8IWB1 547 aa14.39□□□□□ -0.11
COL4A5-201ENST00000328300 ZBED9Q6R2W3 1325 aa14.39□□□□□ -0.11
COL4A5-201ENST00000328300 ANKRD30BQ9BXX2 1392 aa14.39□□□□□ -0.11
COL4A5-201ENST00000328300 PCF11O94913 1555 aaKnown RBP14.38□□□□□ -0.11
COL4A5-201ENST00000328300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.38□□□□□ -0.116e-6■■■■□ 20.4
COL4A5-201ENST00000328300 AFAP1Q8N556 730 aa14.37□□□□□ -0.11
COL4A5-201ENST00000328300 AAMPQ13685 434 aa14.37□□□□□ -0.11
COL4A5-201ENST00000328300 KIAA1211Q6ZU35 1233 aa14.36□□□□□ -0.11
COL4A5-201ENST00000328300 MINK1Q8N4C8 1332 aaPredicted RBP14.36□□□□□ -0.11
COL4A5-201ENST00000328300 TMX4Q9H1E5 349 aaPredicted RBP14.36□□□□□ -0.11
COL4A5-201ENST00000328300 DIAPH1O60610 1272 aaKnown RBP14.36□□□□□ -0.11
COL4A5-201ENST00000328300 C1orf141Q5JVX7 400 aa14.36□□□□□ -0.11
COL4A5-201ENST00000328300 B4GALNT3Q6L9W6 998 aa14.35□□□□□ -0.11
COL4A5-201ENST00000328300 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
COL4A5-201ENST00000328300 THEMISQ8N1K5 641 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-201ENST00000328300 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-201ENST00000328300 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
COL4A5-201ENST00000328300 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
COL4A5-201ENST00000328300 CDK13Q14004 1512 aaKnown RBP14.32□□□□□ -0.12
COL4A5-201ENST00000328300 SENP3-EIF4A1A0A087X0R7 540 aa14.32□□□□□ -0.12
COL4A5-201ENST00000328300 GOLGA6L6A8MZA4 724 aa14.32□□□□□ -0.12
COL4A5-201ENST00000328300 KIF7Q2M1P5 1343 aa14.32□□□□□ -0.12
COL4A5-201ENST00000328300 RUNDC1Q96C34 613 aa14.31□□□□□ -0.12
COL4A5-201ENST00000328300 CHMP4CQ96CF2 233 aa14.3□□□□□ -0.12
COL4A5-201ENST00000328300 CD109Q6YHK3 1445 aa14.3□□□□□ -0.12
COL4A5-201ENST00000328300 PTPN23Q9H3S7 1636 aa14.3□□□□□ -0.12
COL4A5-201ENST00000328300 ZKSCAN2Q63HK3 967 aa14.3□□□□□ -0.12
COL4A5-201ENST00000328300 ATF3P18847 181 aa14.3□□□□□ -0.12
COL4A5-201ENST00000328300 PSME1Q06323 249 aa14.3□□□□□ -0.12
COL4A5-201ENST00000328300 PLB1Q6P1J6 1458 aa14.29□□□□□ -0.12
COL4A5-201ENST00000328300 AKNAQ7Z591 1439 aa14.29□□□□□ -0.12
COL4A5-201ENST00000328300 CCDC9Q9Y3X0 531 aaKnown RBP14.29□□□□□ -0.12
COL4A5-201ENST00000328300 GPRASP1Q5JY77 1395 aa14.29□□□□□ -0.12
COL4A5-201ENST00000328300 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
COL4A5-201ENST00000328300 CCDC146Q8IYE0 955 aa14.29□□□□□ -0.12
COL4A5-201ENST00000328300 TEFQ10587 303 aa14.28□□□□□ -0.12
COL4A5-201ENST00000328300 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
COL4A5-201ENST00000328300 NRDCO43847 1150 aa14.27□□□□□ -0.12
COL4A5-201ENST00000328300 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
COL4A5-201ENST00000328300 NAIPQ13075 1403 aa14.27□□□□□ -0.13
COL4A5-201ENST00000328300 ADGRL1O94910 1474 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms