RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
NPIPA1-201ENST00000328085 NAP1L5Q96NT1 182 aaPredicted RBP12.19□□□□□ -0.46
NPIPA1-201ENST00000328085 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
NPIPA1-201ENST00000328085 DISP1Q96F81 1524 aa12.19□□□□□ -0.46
NPIPA1-201ENST00000328085 ARAP3Q8WWN8 1544 aa12.18□□□□□ -0.46
NPIPA1-201ENST00000328085 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
NPIPA1-201ENST00000328085 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
NPIPA1-201ENST00000328085 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
NPIPA1-201ENST00000328085 RIMS1Q86UR5 1692 aaKnown RBP12.16□□□□□ -0.46
NPIPA1-201ENST00000328085 NFKBIBQ15653 356 aa12.16□□□□□ -0.46
NPIPA1-201ENST00000328085 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
NPIPA1-201ENST00000328085 IQGAP2Q13576 1575 aa12.16□□□□□ -0.46
NPIPA1-201ENST00000328085 RNF123Q5XPI4 1314 aa12.15□□□□□ -0.46
NPIPA1-201ENST00000328085 TRIM52Q96A61 297 aa12.15□□□□□ -0.46
NPIPA1-201ENST00000328085 CARMIL1Q5VZK9 1371 aa12.15□□□□□ -0.46
NPIPA1-201ENST00000328085 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
NPIPA1-201ENST00000328085 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
NPIPA1-201ENST00000328085 ANP32BQ92688 251 aaKnown RBP12.13□□□□□ -0.47
NPIPA1-201ENST00000328085 BCCIPQ9P287 314 aaKnown RBP eCLIP12.13□□□□□ -0.47
NPIPA1-201ENST00000328085 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
NPIPA1-201ENST00000328085 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
NPIPA1-201ENST00000328085 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
NPIPA1-201ENST00000328085 RRAGDQ9NQL2 400 aaPredicted RBP12.11□□□□□ -0.47
NPIPA1-201ENST00000328085 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
NPIPA1-201ENST00000328085 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
NPIPA1-201ENST00000328085 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
NPIPA1-201ENST00000328085 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
NPIPA1-201ENST00000328085 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
NPIPA1-201ENST00000328085 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
NPIPA1-201ENST00000328085 SMG6Q86US8 1419 aaKnown RBP12.08□□□□□ -0.48
NPIPA1-201ENST00000328085 VPS8Q8N3P4 1428 aa12.08□□□□□ -0.48
NPIPA1-201ENST00000328085 ARID3CA6NKF2 412 aa12.07□□□□□ -0.48
NPIPA1-201ENST00000328085 KIF20AO95235 890 aa12.07□□□□□ -0.48
NPIPA1-201ENST00000328085 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
NPIPA1-201ENST00000328085 DDX10Q13206 875 aaKnown RBP12.07□□□□□ -0.48
NPIPA1-201ENST00000328085 MLECQ14165 292 aa12.07□□□□□ -0.48
NPIPA1-201ENST00000328085 FTSJ3Q8IY81 847 aaKnown RBP12.07□□□□□ -0.48
NPIPA1-201ENST00000328085 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
NPIPA1-201ENST00000328085 LAS1LQ9Y4W2 734 aaKnown RBP12.07□□□□□ -0.48
NPIPA1-201ENST00000328085 UGGT2Q9NYU1 1516 aa12.06□□□□□ -0.48
NPIPA1-201ENST00000328085 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
NPIPA1-201ENST00000328085 YEATS2Q9ULM3 1422 aa12.06□□□□□ -0.48
NPIPA1-201ENST00000328085 STAC3Q96MF2 364 aa12.06□□□□□ -0.48
NPIPA1-201ENST00000328085 KIAA0556O60303 1618 aa12.06□□□□□ -0.48
NPIPA1-201ENST00000328085 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
NPIPA1-201ENST00000328085 DCAF11Q8TEB1 546 aa12.04□□□□□ -0.48
NPIPA1-201ENST00000328085 FRMPD1Q5SYB0 1578 aa12.03□□□□□ -0.48
NPIPA1-201ENST00000328085 PDE4AP27815 886 aa12.02□□□□□ -0.49
NPIPA1-201ENST00000328085 CEBPAP49715 358 aaPredicted RBP12.02□□□□□ -0.49
NPIPA1-201ENST00000328085 TRIM44Q96DX7 344 aaPredicted RBP12.02□□□□□ -0.49
NPIPA1-201ENST00000328085 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
NPIPA1-201ENST00000328085 RRBP1Q9P2E9 1410 aaKnown RBP12.02□□□□□ -0.49
NPIPA1-201ENST00000328085 ABCA8O94911 1581 aa12.01□□□□□ -0.49
NPIPA1-201ENST00000328085 RGS3P49796 1198 aa12.01□□□□□ -0.49
NPIPA1-201ENST00000328085 GTPBP4Q9BZE4 634 aaKnown RBP12.01□□□□□ -0.49
NPIPA1-201ENST00000328085 POGZQ7Z3K3 1410 aa12.01□□□□□ -0.49
NPIPA1-201ENST00000328085 NEO1Q92859 1461 aa12□□□□□ -0.49
NPIPA1-201ENST00000328085 DMTNQ08495 405 aa11.99□□□□□ -0.49
NPIPA1-201ENST00000328085 LTBP4Q8N2S1 1624 aa11.98□□□□□ -0.49
NPIPA1-201ENST00000328085 ARHGEF40Q8TER5 1519 aa11.98□□□□□ -0.49
NPIPA1-201ENST00000328085 LETM1O95202 739 aaPredicted RBP11.98□□□□□ -0.49
NPIPA1-201ENST00000328085 HSP90B1P14625 803 aaKnown RBP11.98□□□□□ -0.49
NPIPA1-201ENST00000328085 ARID3AQ99856 593 aa11.98□□□□□ -0.49
NPIPA1-201ENST00000328085 ABCA9Q8IUA7 1624 aa11.97□□□□□ -0.49
NPIPA1-201ENST00000328085 FANCAO15360 1455 aa11.97□□□□□ -0.49
NPIPA1-201ENST00000328085 UBAP1LF5GYI3 381 aa11.97□□□□□ -0.49
NPIPA1-201ENST00000328085 IRX6P78412 446 aaPredicted RBP11.97□□□□□ -0.49
NPIPA1-201ENST00000328085 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
NPIPA1-201ENST00000328085 PTPRTO14522 1441 aa11.96□□□□□ -0.49
NPIPA1-201ENST00000328085 SLC20A2Q08357 652 aa11.96□□□□□ -0.49
NPIPA1-201ENST00000328085 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.5
NPIPA1-201ENST00000328085 ATP10BO94823 1461 aa11.95□□□□□ -0.5
NPIPA1-201ENST00000328085 AKNAQ7Z591 1439 aa11.95□□□□□ -0.5
NPIPA1-201ENST00000328085 FSD2A1L4K1 749 aa11.95□□□□□ -0.5
NPIPA1-201ENST00000328085 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
NPIPA1-201ENST00000328085 DENND4BO75064 1496 aaPredicted RBP11.95□□□□□ -0.5
NPIPA1-201ENST00000328085 TTC37Q6PGP7 1564 aa11.94□□□□□ -0.5
NPIPA1-201ENST00000328085 ESPNB1AK53 854 aa11.94□□□□□ -0.5
NPIPA1-201ENST00000328085 MRE11P49959 708 aa11.94□□□□□ -0.5
NPIPA1-201ENST00000328085 PAXIP1Q6ZW49 1069 aaPredicted RBP11.94□□□□□ -0.5
NPIPA1-201ENST00000328085 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
NPIPA1-201ENST00000328085 FER1L4A9Z1Z3 1794 aa11.94□□□□□ -0.5
NPIPA1-201ENST00000328085 IQSEC2Q5JU85 1478 aa11.94□□□□□ -0.5
NPIPA1-201ENST00000328085 CLIP1P30622 1438 aa11.94□□□□□ -0.5
NPIPA1-201ENST00000328085 RAPGEF2Q9Y4G8 1499 aa11.92□□□□□ -0.5
NPIPA1-201ENST00000328085 CHMP4BQ9H444 224 aaKnown RBP11.92□□□□□ -0.5
NPIPA1-201ENST00000328085 NUDCQ9Y266 331 aa11.92□□□□□ -0.5
NPIPA1-201ENST00000328085 UHRF1BP1Q6BDS2 1440 aa11.92□□□□□ -0.5
NPIPA1-201ENST00000328085 PTMSP20962 102 aa11.91□□□□□ -0.5
NPIPA1-201ENST00000328085 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
NPIPA1-201ENST00000328085 RICTORQ6R327 1708 aa11.91□□□□□ -0.5
NPIPA1-201ENST00000328085 HSPA1LP34931 641 aa11.9□□□□□ -0.5
NPIPA1-201ENST00000328085 MED1Q15648 1581 aaPredicted RBP11.9□□□□□ -0.5
NPIPA1-201ENST00000328085 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
NPIPA1-201ENST00000328085 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
NPIPA1-201ENST00000328085 ZFYVE16Q7Z3T8 1539 aa11.9□□□□□ -0.5
NPIPA1-201ENST00000328085 CCDC144AA2RUR9 1427 aa11.89□□□□□ -0.51
NPIPA1-201ENST00000328085 CAPN15O75808 1086 aa11.89□□□□□ -0.51
NPIPA1-201ENST00000328085 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
NPIPA1-201ENST00000328085 AXDND1Q5T1B0 1012 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms