RNA–Protein interactions for RNA: ENST00000322444.6

KCTD2-201, Transcript of potassium channel tetramerization domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD2, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD2-201ENST00000322444 PTPN23Q9H3S7 1636 aa23.52■■□□□ 1.36
KCTD2-201ENST00000322444 A0A0U1RQG5 324 aaPredicted RBP23.52■■□□□ 1.36
KCTD2-201ENST00000322444 HSP90AA1P07900 732 aaKnown RBP23.52■■□□□ 1.36
KCTD2-201ENST00000322444 WASHC2CQ9Y4E1 1318 aa23.51■■□□□ 1.35
KCTD2-201ENST00000322444 ERCC6L2Q5T890 1561 aa23.51■■□□□ 1.35
KCTD2-201ENST00000322444 NUP160Q12769 1436 aa23.51■■□□□ 1.35
KCTD2-201ENST00000322444 ARHGAP5Q13017 1502 aa23.5■■□□□ 1.35
KCTD2-201ENST00000322444 UGGT2Q9NYU1 1516 aa23.5■■□□□ 1.35
KCTD2-201ENST00000322444 TCERG1O14776 1098 aaKnown RBP23.49■■□□□ 1.35
KCTD2-201ENST00000322444 GPATCH8Q9UKJ3 1502 aaKnown RBP23.48■■□□□ 1.35
KCTD2-201ENST00000322444 MAP3K1Q13233 1512 aa23.48■■□□□ 1.35
KCTD2-201ENST00000322444 ZBED9Q6R2W3 1325 aa23.47■■□□□ 1.35
KCTD2-201ENST00000322444 FAM43AQ8N2R8 423 aa23.47■■□□□ 1.35
KCTD2-201ENST00000322444 SAMD9Q5K651 1589 aa23.47■■□□□ 1.35
KCTD2-201ENST00000322444 PNNQ9H307 717 aaKnown RBP23.46■■□□□ 1.35
KCTD2-201ENST00000322444 ST20-MTHFSA0A0A6YYL1 179 aa23.46■■□□□ 1.35
KCTD2-201ENST00000322444 RAPGEF6Q8TEU7 1601 aa23.45■■□□□ 1.34
KCTD2-201ENST00000322444 AKNAQ7Z591 1439 aa23.45■■□□□ 1.34
KCTD2-201ENST00000322444 CAMSAP2Q08AD1 1489 aa23.44■■□□□ 1.34
KCTD2-201ENST00000322444 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
KCTD2-201ENST00000322444 C9orf84Q5VXU9 1444 aa23.44■■□□□ 1.34
KCTD2-201ENST00000322444 SCAPERQ9BY12 1400 aa23.44■■□□□ 1.34
KCTD2-201ENST00000322444 MAPKBP1O60336 1514 aa23.43■■□□□ 1.34
KCTD2-201ENST00000322444 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
KCTD2-201ENST00000322444 MIA2Q96PC5 1412 aa23.42■■□□□ 1.34
KCTD2-201ENST00000322444 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
KCTD2-201ENST00000322444 CC2D1BQ5T0F9 858 aaKnown RBP23.41■■□□□ 1.34
KCTD2-201ENST00000322444 STK26Q9P289 416 aa23.39■■□□□ 1.33
KCTD2-201ENST00000322444 FRAT2O75474 233 aaPredicted RBP23.38■■□□□ 1.33
KCTD2-201ENST00000322444 NCOA1Q15788 1441 aa23.38■■□□□ 1.33
KCTD2-201ENST00000322444 TNNT2P45379 298 aaPredicted RBP23.37■■□□□ 1.33
KCTD2-201ENST00000322444 EXOC6Q8TAG9 804 aa23.37■■□□□ 1.33
KCTD2-201ENST00000322444 KIF14Q15058 1648 aa23.37■■□□□ 1.33
KCTD2-201ENST00000322444 TMC1Q8TDI8 760 aa23.36■■□□□ 1.33
KCTD2-201ENST00000322444 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
KCTD2-201ENST00000322444 CFAP43Q8NDM7 1665 aa23.35■■□□□ 1.33
KCTD2-201ENST00000322444 BACH2Q9BYV9 841 aa23.32■■□□□ 1.32
KCTD2-201ENST00000322444 RSPH4AQ5TD94 716 aa23.31■■□□□ 1.32
KCTD2-201ENST00000322444 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
KCTD2-201ENST00000322444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.29■■□□□ 1.32
KCTD2-201ENST00000322444 SKAP1Q86WV1 359 aa23.28■■□□□ 1.32
KCTD2-201ENST00000322444 KDM6BO15054 1643 aa23.27■■□□□ 1.32
KCTD2-201ENST00000322444 PLEKHH2Q8IVE3 1493 aa23.25■■□□□ 1.31
KCTD2-201ENST00000322444 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
KCTD2-201ENST00000322444 TMEM132EQ6IEE7 984 aa23.25■■□□□ 1.31
KCTD2-201ENST00000322444 TRAK1Q9UPV9 953 aa23.25■■□□□ 1.31
KCTD2-201ENST00000322444 CHD1O14646 1710 aa23.24■■□□□ 1.31
KCTD2-201ENST00000322444 ANKRD30BQ9BXX2 1392 aa23.23■■□□□ 1.31
KCTD2-201ENST00000322444 GZF1Q9H116 711 aaPredicted RBP23.22■■□□□ 1.31
KCTD2-201ENST00000322444 LRRIQ1Q96JM4 1722 aa23.22■■□□□ 1.31
KCTD2-201ENST00000322444 TRAPPC8Q9Y2L5 1435 aa23.22■■□□□ 1.31
KCTD2-201ENST00000322444 RGS3P49796 1198 aa23.22■■□□□ 1.31
KCTD2-201ENST00000322444 L1TD1Q5T7N2 865 aaKnown RBP23.22■■□□□ 1.31
KCTD2-201ENST00000322444 SLKQ9H2G2 1235 aaPredicted RBP23.21■■□□□ 1.31
KCTD2-201ENST00000322444 KIF7Q2M1P5 1343 aa23.19■■□□□ 1.3
KCTD2-201ENST00000322444 USP47Q96K76 1375 aa23.19■■□□□ 1.3
KCTD2-201ENST00000322444 RRP9O43818 475 aaKnown RBP23.18■■□□□ 1.3
KCTD2-201ENST00000322444 MS4A1P11836 297 aa23.18■■□□□ 1.3
KCTD2-201ENST00000322444 RRAGDQ9NQL2 400 aaPredicted RBP23.18■■□□□ 1.3
KCTD2-201ENST00000322444 KANK1Q14678 1352 aa23.18■■□□□ 1.3
KCTD2-201ENST00000322444 CFAP70Q5T0N1 1121 aa23.17■■□□□ 1.3
KCTD2-201ENST00000322444 NUTM2FA1L443 756 aa23.16■■□□□ 1.3
KCTD2-201ENST00000322444 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
KCTD2-201ENST00000322444 RCAN3Q9UKA8 241 aa23.16■■□□□ 1.3
KCTD2-201ENST00000322444 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
KCTD2-201ENST00000322444 ARID3AQ99856 593 aa23.15■■□□□ 1.3
KCTD2-201ENST00000322444 POGKQ9P215 609 aa23.14■■□□□ 1.29
KCTD2-201ENST00000322444 KIAA1107Q9UPP5 1409 aa23.14■■□□□ 1.29
KCTD2-201ENST00000322444 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
KCTD2-201ENST00000322444 PLIN1O60240 522 aa23.13■■□□□ 1.29
KCTD2-201ENST00000322444 ROCK1Q13464 1354 aa23.12■■□□□ 1.29
KCTD2-201ENST00000322444 SLC24A1O60721 1099 aa23.12■■□□□ 1.29
KCTD2-201ENST00000322444 TRIM44Q96DX7 344 aaPredicted RBP23.12■■□□□ 1.29
KCTD2-201ENST00000322444 CD109Q6YHK3 1445 aa23.12■■□□□ 1.29
KCTD2-201ENST00000322444 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
KCTD2-201ENST00000322444 FBXO31Q5XUX0 539 aaPredicted RBP23.09■■□□□ 1.29
KCTD2-201ENST00000322444 NEUROD2Q15784 382 aa23.07■■□□□ 1.28
KCTD2-201ENST00000322444 FANCAO15360 1455 aa23.07■■□□□ 1.28
KCTD2-201ENST00000322444 GOLGA6L3A6NEY3 463 aa23.06■■□□□ 1.28
KCTD2-201ENST00000322444 SMG6Q86US8 1419 aaKnown RBP23.06■■□□□ 1.28
KCTD2-201ENST00000322444 TCOF1Q13428 1488 aaKnown RBP23.06■■□□□ 1.28
KCTD2-201ENST00000322444 PANK3Q9H999 370 aa23.06■■□□□ 1.28
KCTD2-201ENST00000322444 SPRYD3Q8NCJ5 442 aa23.05■■□□□ 1.28
KCTD2-201ENST00000322444 ADGRL1O94910 1474 aa23.04■■□□□ 1.28
KCTD2-201ENST00000322444 SOX12O15370 315 aa23.03■■□□□ 1.28
KCTD2-201ENST00000322444 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
KCTD2-201ENST00000322444 TMF1P82094 1093 aa23.03■■□□□ 1.28
KCTD2-201ENST00000322444 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
KCTD2-201ENST00000322444 BECN1Q14457 450 aa23.02■■□□□ 1.28
KCTD2-201ENST00000322444 PLCH2O75038 1416 aa23.02■■□□□ 1.28
KCTD2-201ENST00000322444 ABCA8O94911 1581 aa23.02■■□□□ 1.28
KCTD2-201ENST00000322444 CCDC7Q96M83 1385 aa23.02■■□□□ 1.28
KCTD2-201ENST00000322444 ABCC2Q92887 1545 aa23■■□□□ 1.27
KCTD2-201ENST00000322444 RBM10P98175 930 aaKnown RBP23■■□□□ 1.27
KCTD2-201ENST00000322444 SRPK2P78362 688 aaKnown RBP22.98■■□□□ 1.27
KCTD2-201ENST00000322444 ABCC10Q5T3U5 1492 aa22.97■■□□□ 1.27
KCTD2-201ENST00000322444 CRBNQ96SW2 442 aa22.97■■□□□ 1.27
KCTD2-201ENST00000322444 CEBPAP49715 358 aaPredicted RBP22.96■■□□□ 1.27
KCTD2-201ENST00000322444 PZPP20742 1482 aa22.96■■□□□ 1.27
KCTD2-201ENST00000322444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms