RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
CLK1-201ENST00000321356 FBLN2P98095 1184 aa11.83□□□□□ -0.52
CLK1-201ENST00000321356 CARD11Q9BXL7 1154 aa11.83□□□□□ -0.52
CLK1-201ENST00000321356 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
CLK1-201ENST00000321356 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
CLK1-201ENST00000321356 TSPY4P0CV99 314 aa11.82□□□□□ -0.52
CLK1-201ENST00000321356 TSPY10P0CW01 314 aa11.82□□□□□ -0.52
CLK1-201ENST00000321356 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
CLK1-201ENST00000321356 UNC13BO14795 1591 aa11.81□□□□□ -0.52
CLK1-201ENST00000321356 BRD4O60885 1362 aaPredicted RBP11.8□□□□□ -0.52
CLK1-201ENST00000321356 LAMC1P11047 1609 aa11.8□□□□□ -0.52
CLK1-201ENST00000321356 HNRNPMP52272 730 aaKnown RBP eCLIP11.79□□□□□ -0.521e-7■■■■□ 21.9
CLK1-201ENST00000321356 PRAG1Q86YV5 1406 aa11.79□□□□□ -0.52
CLK1-201ENST00000321356 ST20-MTHFSA0A0A6YYL1 179 aa11.78□□□□□ -0.52
CLK1-201ENST00000321356 POLR3GLQ9BT43 218 aa11.78□□□□□ -0.52
CLK1-201ENST00000321356 MYBBP1AQ9BQG0 1328 aaKnown RBP11.78□□□□□ -0.52
CLK1-201ENST00000321356 RSPH4AQ5TD94 716 aa11.78□□□□□ -0.52
CLK1-201ENST00000321356 PLXNC1O60486 1568 aa11.77□□□□□ -0.52
CLK1-201ENST00000321356 GPRASP1Q5JY77 1395 aa11.77□□□□□ -0.52
CLK1-201ENST00000321356 RALBP1Q15311 655 aa11.77□□□□□ -0.53
CLK1-201ENST00000321356 TMC1Q8TDI8 760 aa11.77□□□□□ -0.53
CLK1-201ENST00000321356 IQGAP3Q86VI3 1631 aa11.76□□□□□ -0.53
CLK1-201ENST00000321356 DCAF11Q8TEB1 546 aa11.76□□□□□ -0.53
CLK1-201ENST00000321356 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
CLK1-201ENST00000321356 TTC37Q6PGP7 1564 aa11.76□□□□□ -0.53
CLK1-201ENST00000321356 SYCP2Q9BX26 1530 aa11.76□□□□□ -0.53
CLK1-201ENST00000321356 PRDM15P57071 1507 aaPredicted RBP11.75□□□□□ -0.53
CLK1-201ENST00000321356 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
CLK1-201ENST00000321356 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
CLK1-201ENST00000321356 SHROOM2Q13796 1616 aa11.75□□□□□ -0.53
CLK1-201ENST00000321356 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
CLK1-201ENST00000321356 A2MP01023 1474 aa11.74□□□□□ -0.53
CLK1-201ENST00000321356 ATP10AO60312 1499 aa11.74□□□□□ -0.53
CLK1-201ENST00000321356 MAGI2Q86UL8 1455 aa11.74□□□□□ -0.53
CLK1-201ENST00000321356 MYO5CQ9NQX4 1742 aa11.74□□□□□ -0.53
CLK1-201ENST00000321356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLK1-201ENST00000321356 EIF2AK4Q9P2K8 1649 aaKnown RBP11.73□□□□□ -0.53
CLK1-201ENST00000321356 COL17A1Q9UMD9 1497 aaPredicted RBP11.73□□□□□ -0.53
CLK1-201ENST00000321356 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
CLK1-201ENST00000321356 ZMYM4Q5VZL5 1548 aa11.72□□□□□ -0.53
CLK1-201ENST00000321356 PLEKHH2Q8IVE3 1493 aa11.72□□□□□ -0.53
CLK1-201ENST00000321356 ARHGAP5Q13017 1502 aa11.72□□□□□ -0.53
CLK1-201ENST00000321356 RNF17Q9BXT8 1623 aaKnown RBP11.71□□□□□ -0.53
CLK1-201ENST00000321356 CHD1O14646 1710 aa11.71□□□□□ -0.53
CLK1-201ENST00000321356 NLRP13Q86W25 1043 aa11.71□□□□□ -0.53
CLK1-201ENST00000321356 INSRP06213 1382 aa11.71□□□□□ -0.53
CLK1-201ENST00000321356 PER1O15534 1290 aaPredicted RBP11.7□□□□□ -0.54
CLK1-201ENST00000321356 CCDC136Q96JN2 1154 aa11.7□□□□□ -0.54
CLK1-201ENST00000321356 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
CLK1-201ENST00000321356 WASHC2CQ9Y4E1 1318 aa11.7□□□□□ -0.54
CLK1-201ENST00000321356 ERICH6Q7L0X2 663 aa11.7□□□□□ -0.54
CLK1-201ENST00000321356 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
CLK1-201ENST00000321356 NBPF1Q3BBV0 1214 aa11.68□□□□□ -0.54
CLK1-201ENST00000321356 TESK2Q96S53 571 aa11.68□□□□□ -0.54
CLK1-201ENST00000321356 ERBINQ96RT1 1412 aa11.68□□□□□ -0.54
CLK1-201ENST00000321356 PDE3BQ13370 1112 aa11.68□□□□□ -0.54
CLK1-201ENST00000321356 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
CLK1-201ENST00000321356 RRP1P56182 461 aaKnown RBP11.67□□□□□ -0.54
CLK1-201ENST00000321356 BLMP54132 1417 aaPredicted RBP11.66□□□□□ -0.54
CLK1-201ENST00000321356 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
CLK1-201ENST00000321356 SENP3-EIF4A1A0A087X0R7 540 aa11.64□□□□□ -0.55
CLK1-201ENST00000321356 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
CLK1-201ENST00000321356 ABCC1P33527 1531 aa11.64□□□□□ -0.55
CLK1-201ENST00000321356 IQGAP1P46940 1657 aa11.64□□□□□ -0.55
CLK1-201ENST00000321356 BCL11AQ9H165 835 aa11.63□□□□□ -0.55
CLK1-201ENST00000321356 RCAN3Q9UKA8 241 aa11.63□□□□□ -0.55
CLK1-201ENST00000321356 NOP58Q9Y2X3 529 aaKnown RBP11.63□□□□□ -0.55
CLK1-201ENST00000321356 ERCC6L2Q5T890 1561 aa11.63□□□□□ -0.55
CLK1-201ENST00000321356 MADDQ8WXG6 1647 aa11.63□□□□□ -0.55
CLK1-201ENST00000321356 PLCH2O75038 1416 aa11.63□□□□□ -0.55
CLK1-201ENST00000321356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.62□□□□□ -0.552e-8■■□□□ 12.7
CLK1-201ENST00000321356 SPHKAPQ2M3C7 1700 aa11.61□□□□□ -0.55
CLK1-201ENST00000321356 ZCCHC11Q5TAX3 1644 aaKnown RBP11.61□□□□□ -0.55
CLK1-201ENST00000321356 TRPM2O94759 1503 aa11.6□□□□□ -0.55
CLK1-201ENST00000321356 UHRF1BP1LA0JNW5 1464 aa11.6□□□□□ -0.55
CLK1-201ENST00000321356 WDR7Q9Y4E6 1490 aa11.6□□□□□ -0.55
CLK1-201ENST00000321356 TMF1P82094 1093 aa11.6□□□□□ -0.55
CLK1-201ENST00000321356 EXOC6Q8TAG9 804 aa11.6□□□□□ -0.55
CLK1-201ENST00000321356 CEP152O94986 1710 aa11.6□□□□□ -0.55
CLK1-201ENST00000321356 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
CLK1-201ENST00000321356 PANK3Q9H999 370 aa11.59□□□□□ -0.55
CLK1-201ENST00000321356 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
CLK1-201ENST00000321356 ARAP3Q8WWN8 1544 aa11.59□□□□□ -0.55
CLK1-201ENST00000321356 IPO9Q96P70 1041 aaKnown RBP11.59□□□□□ -0.55
CLK1-201ENST00000321356 ANP32AP39687 249 aaKnown RBP11.58□□□□□ -0.56
CLK1-201ENST00000321356 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
CLK1-201ENST00000321356 TRAPPC8Q9Y2L5 1435 aa11.58□□□□□ -0.56
CLK1-201ENST00000321356 SYNMO15061 1565 aa11.58□□□□□ -0.56
CLK1-201ENST00000321356 ZFYVE16Q7Z3T8 1539 aa11.58□□□□□ -0.56
CLK1-201ENST00000321356 TCERG1O14776 1098 aaKnown RBP11.57□□□□□ -0.56
CLK1-201ENST00000321356 CC2D1BQ5T0F9 858 aaKnown RBP11.57□□□□□ -0.56
CLK1-201ENST00000321356 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
CLK1-201ENST00000321356 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
CLK1-201ENST00000321356 PTPRTO14522 1441 aa11.57□□□□□ -0.56
CLK1-201ENST00000321356 SCAPERQ9BY12 1400 aa11.57□□□□□ -0.56
CLK1-201ENST00000321356 EFCAB2Q5VUJ9 269 aa11.57□□□□□ -0.56
CLK1-201ENST00000321356 NEURL4Q96JN8 1562 aa11.56□□□□□ -0.56
CLK1-201ENST00000321356 TET3O43151 1660 aa11.56□□□□□ -0.56
CLK1-201ENST00000321356 CLASP1Q7Z460 1538 aa11.56□□□□□ -0.56
CLK1-201ENST00000321356 CLTCL1P53675 1640 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms