RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 RRBP1Q9P2E9 1410 aaKnown RBP20.99■□□□□ 0.95
CLIP4-201ENST00000320081 MINK1Q8N4C8 1332 aaPredicted RBP20.98■□□□□ 0.95
CLIP4-201ENST00000320081 NAP1L5Q96NT1 182 aaPredicted RBP20.98■□□□□ 0.95
CLIP4-201ENST00000320081 LTV1Q96GA3 475 aaPredicted RBP20.98■□□□□ 0.95
CLIP4-201ENST00000320081 HDGFL2Q7Z4V5 671 aaPredicted RBP20.98■□□□□ 0.95
CLIP4-201ENST00000320081 SKAP1Q86WV1 359 aa20.97■□□□□ 0.95
CLIP4-201ENST00000320081 HSCBQ8IWL3 235 aa20.97■□□□□ 0.95
CLIP4-201ENST00000320081 SLC4A10Q6U841 1118 aa20.96■□□□□ 0.95
CLIP4-201ENST00000320081 ADAMTS8Q9UP79 889 aa20.96■□□□□ 0.95
CLIP4-201ENST00000320081 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
CLIP4-201ENST00000320081 PTMAP06454 111 aaKnown RBP20.96■□□□□ 0.95
CLIP4-201ENST00000320081 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
CLIP4-201ENST00000320081 NOL8Q76FK4 1167 aaKnown RBP20.95■□□□□ 0.94
CLIP4-201ENST00000320081 CUX1P39880 1505 aa20.93■□□□□ 0.94
CLIP4-201ENST00000320081 AKNAQ7Z591 1439 aa20.93■□□□□ 0.94
CLIP4-201ENST00000320081 PDE3BQ13370 1112 aa20.92■□□□□ 0.94
CLIP4-201ENST00000320081 RWDD1Q9H446 243 aaPredicted RBP20.92■□□□□ 0.94
CLIP4-201ENST00000320081 NAP1L2Q9ULW6 460 aaPredicted RBP20.92■□□□□ 0.94
CLIP4-201ENST00000320081 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
CLIP4-201ENST00000320081 CASC1Q6TDU7 716 aa20.91■□□□□ 0.94
CLIP4-201ENST00000320081 KCNJ4P48050 445 aa20.91■□□□□ 0.94
CLIP4-201ENST00000320081 CFAP70Q5T0N1 1121 aa20.9■□□□□ 0.94
CLIP4-201ENST00000320081 ANKRD50Q9ULJ7 1429 aa20.9■□□□□ 0.94
CLIP4-201ENST00000320081 MS4A1P11836 297 aa20.89■□□□□ 0.94
CLIP4-201ENST00000320081 DNTTIP2Q5QJE6 756 aaKnown RBP20.89■□□□□ 0.94
CLIP4-201ENST00000320081 FOXD4L5Q5VV16 416 aaPredicted RBP20.89■□□□□ 0.93
CLIP4-201ENST00000320081 FOXD4L4Q8WXT5 416 aaPredicted RBP20.89■□□□□ 0.93
CLIP4-201ENST00000320081 RTF1Q92541 710 aaKnown RBP20.89■□□□□ 0.93
CLIP4-201ENST00000320081 RSPH4AQ5TD94 716 aa20.89■□□□□ 0.93
CLIP4-201ENST00000320081 PANK1Q8TE04 598 aa20.89■□□□□ 0.93
CLIP4-201ENST00000320081 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
CLIP4-201ENST00000320081 CNTLNQ9NXG0 1405 aa20.88■□□□□ 0.93
CLIP4-201ENST00000320081 ARID3AQ99856 593 aa20.86■□□□□ 0.93
CLIP4-201ENST00000320081 GGNBP2Q9H3C7 697 aa20.86■□□□□ 0.93
CLIP4-201ENST00000320081 IPO8O15397 1037 aaKnown RBP20.86■□□□□ 0.93
CLIP4-201ENST00000320081 ZNF330Q9Y3S2 320 aaPredicted RBP20.86■□□□□ 0.93
CLIP4-201ENST00000320081 PRG4Q92954 1404 aaPredicted RBP20.85■□□□□ 0.93
CLIP4-201ENST00000320081 FOXD4L6Q3SYB3 417 aaPredicted RBP20.84■□□□□ 0.93
CLIP4-201ENST00000320081 FOXD4L3Q6VB84 417 aaPredicted RBP20.84■□□□□ 0.93
CLIP4-201ENST00000320081 MSH5O43196 834 aa20.84■□□□□ 0.93
CLIP4-201ENST00000320081 FGD1P98174 961 aa20.83■□□□□ 0.93
CLIP4-201ENST00000320081 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
CLIP4-201ENST00000320081 TERF2IPQ9NYB0 399 aa20.83■□□□□ 0.93
CLIP4-201ENST00000320081 PNNQ9H307 717 aaKnown RBP20.82■□□□□ 0.92
CLIP4-201ENST00000320081 HMOX1P09601 288 aa20.81■□□□□ 0.92
CLIP4-201ENST00000320081 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
CLIP4-201ENST00000320081 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
CLIP4-201ENST00000320081 EIF3AQ14152 1382 aaKnown RBP20.79■□□□□ 0.92
CLIP4-201ENST00000320081 ANKRD45Q5TZF3 282 aa20.78■□□□□ 0.92
CLIP4-201ENST00000320081 PNISRQ8TF01 805 aaKnown RBP20.78■□□□□ 0.92
CLIP4-201ENST00000320081 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
CLIP4-201ENST00000320081 FAM161AQ3B820 660 aa20.78■□□□□ 0.92
CLIP4-201ENST00000320081 NGDNQ8NEJ9 315 aaKnown RBP20.78■□□□□ 0.92
CLIP4-201ENST00000320081 PMFBP1Q8TBY8 1022 aa20.78■□□□□ 0.92
CLIP4-201ENST00000320081 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
CLIP4-201ENST00000320081 CENPQQ7L2Z9 268 aaPredicted RBP20.77■□□□□ 0.92
CLIP4-201ENST00000320081 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.92
CLIP4-201ENST00000320081 BCAR3O75815 825 aa20.76■□□□□ 0.91
CLIP4-201ENST00000320081 TRIM6-TRIM34B2RNG4 842 aa20.75■□□□□ 0.91
CLIP4-201ENST00000320081 E9PSI1 815 aa20.75■□□□□ 0.91
CLIP4-201ENST00000320081 MTHFSP49914 203 aa20.75■□□□□ 0.91
CLIP4-201ENST00000320081 ERICH3Q5RHP9 1530 aa20.75■□□□□ 0.91
CLIP4-201ENST00000320081 NAIPQ13075 1403 aa20.73■□□□□ 0.91
CLIP4-201ENST00000320081 RIPK4P57078 832 aa20.73■□□□□ 0.91
CLIP4-201ENST00000320081 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
CLIP4-201ENST00000320081 CCDC9Q9Y3X0 531 aaKnown RBP20.73■□□□□ 0.91
CLIP4-201ENST00000320081 CGNL1Q0VF96 1302 aa20.73■□□□□ 0.91
CLIP4-201ENST00000320081 LNPKQ9C0E8 428 aa20.73■□□□□ 0.91
CLIP4-201ENST00000320081 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
CLIP4-201ENST00000320081 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
CLIP4-201ENST00000320081 AMPHP49418 695 aa20.72■□□□□ 0.91
CLIP4-201ENST00000320081 CDK13Q14004 1512 aaKnown RBP20.71■□□□□ 0.91
CLIP4-201ENST00000320081 HFM1A2PYH4 1435 aa20.71■□□□□ 0.91
CLIP4-201ENST00000320081 GLIPR1L2Q4G1C9 344 aa20.71■□□□□ 0.91
CLIP4-201ENST00000320081 ZKSCAN2Q63HK3 967 aa20.71■□□□□ 0.91
CLIP4-201ENST00000320081 FYCO1Q9BQS8 1478 aa20.7■□□□□ 0.9
CLIP4-201ENST00000320081 TCP11L2Q8N4U5 519 aa20.7■□□□□ 0.9
CLIP4-201ENST00000320081 PPP2R1AP30153 589 aa20.7■□□□□ 0.9
CLIP4-201ENST00000320081 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
CLIP4-201ENST00000320081 ZNF428Q96B54 188 aa20.69■□□□□ 0.9
CLIP4-201ENST00000320081 TIAM1Q13009 1591 aa20.69■□□□□ 0.9
CLIP4-201ENST00000320081 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
CLIP4-201ENST00000320081 NUTM2GQ5VZR2 741 aa20.68■□□□□ 0.9
CLIP4-201ENST00000320081 TSR2Q969E8 191 aaKnown RBP20.68■□□□□ 0.9
CLIP4-201ENST00000320081 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
CLIP4-201ENST00000320081 STK31Q9BXU1 1019 aa20.68■□□□□ 0.9
CLIP4-201ENST00000320081 EVC2Q86UK5 1308 aa20.67■□□□□ 0.9
CLIP4-201ENST00000320081 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
CLIP4-201ENST00000320081 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
CLIP4-201ENST00000320081 TULP1O00294 542 aaPredicted RBP20.66■□□□□ 0.9
CLIP4-201ENST00000320081 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.89
CLIP4-201ENST00000320081 DZIP1LQ8IYY4 767 aaKnown RBP20.64■□□□□ 0.89
CLIP4-201ENST00000320081 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.89
CLIP4-201ENST00000320081 ZRSR1Q15695 479 aaKnown RBP20.63■□□□□ 0.89
CLIP4-201ENST00000320081 GOLGA6L4A6NEF3 574 aa20.63■□□□□ 0.89
CLIP4-201ENST00000320081 RILPL2Q969X0 211 aa20.63■□□□□ 0.89
CLIP4-201ENST00000320081 CHMP3Q9Y3E7 222 aa20.63■□□□□ 0.89
CLIP4-201ENST00000320081 DIAPH1O60610 1272 aaKnown RBP20.62■□□□□ 0.89
CLIP4-201ENST00000320081 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
CLIP4-201ENST00000320081 EIF2S2P20042 333 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms