RNA–Protein interactions for RNA: ENST00000320031.12

ITGA3-202, Transcript of integrin subunit alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGA3, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-202ENST00000320031 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
ITGA3-202ENST00000320031 PCF11O94913 1555 aaKnown RBP21.25■□□□□ 0.99
ITGA3-202ENST00000320031 NUTM2DQ5VT03 806 aaPredicted RBP21.25■□□□□ 0.99
ITGA3-202ENST00000320031 GLIPR1L2Q4G1C9 344 aa21.23■□□□□ 0.99
ITGA3-202ENST00000320031 RGS3P49796 1198 aa21.23■□□□□ 0.99
ITGA3-202ENST00000320031 C9orf84Q5VXU9 1444 aa21.22■□□□□ 0.99
ITGA3-202ENST00000320031 DEKP35659 375 aaKnown RBP21.22■□□□□ 0.99
ITGA3-202ENST00000320031 CALD1Q05682 793 aaKnown RBP21.22■□□□□ 0.99
ITGA3-202ENST00000320031 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
ITGA3-202ENST00000320031 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
ITGA3-202ENST00000320031 CCDC7Q96M83 1385 aa21.21■□□□□ 0.99
ITGA3-202ENST00000320031 SOX12O15370 315 aa21.2■□□□□ 0.98
ITGA3-202ENST00000320031 A0A0G2JS52 829 aa21.19■□□□□ 0.98
ITGA3-202ENST00000320031 DAPK1P53355 1430 aa21.19■□□□□ 0.98
ITGA3-202ENST00000320031 GOLGA2Q08379 1002 aa21.19■□□□□ 0.98
ITGA3-202ENST00000320031 CASC1Q6TDU7 716 aa21.18■□□□□ 0.98
ITGA3-202ENST00000320031 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
ITGA3-202ENST00000320031 AFAP1Q8N556 730 aa21.18■□□□□ 0.98
ITGA3-202ENST00000320031 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
ITGA3-202ENST00000320031 EVC2Q86UK5 1308 aa21.17■□□□□ 0.98
ITGA3-202ENST00000320031 IPO8O15397 1037 aaKnown RBP21.16■□□□□ 0.98
ITGA3-202ENST00000320031 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
ITGA3-202ENST00000320031 KIAA1107Q9UPP5 1409 aa21.16■□□□□ 0.98
ITGA3-202ENST00000320031 RTF1Q92541 710 aaKnown RBP21.16■□□□□ 0.98
ITGA3-202ENST00000320031 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
ITGA3-202ENST00000320031 ROCK1Q13464 1354 aa21.15■□□□□ 0.98
ITGA3-202ENST00000320031 ZBED9Q6R2W3 1325 aa21.13■□□□□ 0.97
ITGA3-202ENST00000320031 CNTLNQ9NXG0 1405 aa21.13■□□□□ 0.97
ITGA3-202ENST00000320031 NAIPQ13075 1403 aa21.12■□□□□ 0.97
ITGA3-202ENST00000320031 CGNL1Q0VF96 1302 aa21.12■□□□□ 0.97
ITGA3-202ENST00000320031 RTN4Q9NQC3 1192 aaKnown RBP21.08■□□□□ 0.97
ITGA3-202ENST00000320031 PAK3O75914 559 aaPredicted RBP21.08■□□□□ 0.96
ITGA3-202ENST00000320031 CCDC146Q8IYE0 955 aa21.08■□□□□ 0.96
ITGA3-202ENST00000320031 WASHC2AQ641Q2 1341 aa21.07■□□□□ 0.96
ITGA3-202ENST00000320031 CENPJQ9HC77 1338 aaPredicted RBP21.07■□□□□ 0.96
ITGA3-202ENST00000320031 NGDNQ8NEJ9 315 aaKnown RBP21.05■□□□□ 0.96
ITGA3-202ENST00000320031 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
ITGA3-202ENST00000320031 PLB1Q6P1J6 1458 aa21.04■□□□□ 0.96
ITGA3-202ENST00000320031 LMOD3Q0VAK6 560 aa21.03■□□□□ 0.96
ITGA3-202ENST00000320031 GOLGA6L22H0YM25 854 aa21.03■□□□□ 0.96
ITGA3-202ENST00000320031 PTPN23Q9H3S7 1636 aa21.03■□□□□ 0.96
ITGA3-202ENST00000320031 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.03■□□□□ 0.96
ITGA3-202ENST00000320031 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
ITGA3-202ENST00000320031 TCERG1O14776 1098 aaKnown RBP21.02■□□□□ 0.96
ITGA3-202ENST00000320031 NGEFQ8N5V2 710 aa21.01■□□□□ 0.95
ITGA3-202ENST00000320031 RWDD1Q9H446 243 aaPredicted RBP21.01■□□□□ 0.95
ITGA3-202ENST00000320031 CHMP4AQ9BY43 222 aa21.01■□□□□ 0.95
ITGA3-202ENST00000320031 MINK1Q8N4C8 1332 aaPredicted RBP21.01■□□□□ 0.95
ITGA3-202ENST00000320031 ARXQ96QS3 562 aa21.01■□□□□ 0.95
ITGA3-202ENST00000320031 SCAPERQ9BY12 1400 aa20.99■□□□□ 0.95
ITGA3-202ENST00000320031 CCDC141Q6ZP82 1450 aa20.99■□□□□ 0.95
ITGA3-202ENST00000320031 CAMSAP2Q08AD1 1489 aa20.98■□□□□ 0.95
ITGA3-202ENST00000320031 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
ITGA3-202ENST00000320031 ARHGEF11O15085 1522 aa20.98■□□□□ 0.95
ITGA3-202ENST00000320031 OS9Q13438 667 aaPredicted RBP20.98■□□□□ 0.95
ITGA3-202ENST00000320031 SMC4Q9NTJ3 1288 aa20.98■□□□□ 0.95
ITGA3-202ENST00000320031 NBPF8Q3BBV2 869 aa20.98■□□□□ 0.95
ITGA3-202ENST00000320031 PMFBP1Q8TBY8 1022 aa20.97■□□□□ 0.95
ITGA3-202ENST00000320031 ITPRIPQ8IWB1 547 aa20.97■□□□□ 0.95
ITGA3-202ENST00000320031 ABCC5O15440 1437 aa20.96■□□□□ 0.95
ITGA3-202ENST00000320031 E9PSI1 815 aa20.96■□□□□ 0.95
ITGA3-202ENST00000320031 KIF14Q15058 1648 aa20.96■□□□□ 0.95
ITGA3-202ENST00000320031 COG3Q96JB2 828 aa20.95■□□□□ 0.95
ITGA3-202ENST00000320031 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
ITGA3-202ENST00000320031 NCLP19338 710 aaKnown RBP20.94■□□□□ 0.94
ITGA3-202ENST00000320031 AMPHP49418 695 aa20.94■□□□□ 0.94
ITGA3-202ENST00000320031 BRD4O60885 1362 aaPredicted RBP20.93■□□□□ 0.94
ITGA3-202ENST00000320031 AKNAQ7Z591 1439 aa20.93■□□□□ 0.94
ITGA3-202ENST00000320031 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
ITGA3-202ENST00000320031 CFAP70Q5T0N1 1121 aa20.92■□□□□ 0.94
ITGA3-202ENST00000320031 STK31Q9BXU1 1019 aa20.91■□□□□ 0.94
ITGA3-202ENST00000320031 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
ITGA3-202ENST00000320031 RRP7AQ9Y3A4 280 aaKnown RBP20.9■□□□□ 0.94
ITGA3-202ENST00000320031 NBPF1Q3BBV0 1214 aa20.89■□□□□ 0.94
ITGA3-202ENST00000320031 APAF1O14727 1248 aa20.89■□□□□ 0.93
ITGA3-202ENST00000320031 RRP1P56182 461 aaKnown RBP20.89■□□□□ 0.93
ITGA3-202ENST00000320031 CSB-PGBD3P0DP91 1061 aa20.89■□□□□ 0.93
ITGA3-202ENST00000320031 ANKRD30BQ9BXX2 1392 aa20.88■□□□□ 0.93
ITGA3-202ENST00000320031 HSP90AB1P08238 724 aaKnown RBP20.86■□□□□ 0.93
ITGA3-202ENST00000320031 NCOA1Q15788 1441 aa20.86■□□□□ 0.93
ITGA3-202ENST00000320031 TMEM132EQ6IEE7 984 aa20.86■□□□□ 0.93
ITGA3-202ENST00000320031 CLUAP1Q96AJ1 413 aa20.86■□□□□ 0.93
ITGA3-202ENST00000320031 SLC52A1Q9NWF4 448 aa20.86■□□□□ 0.93
ITGA3-202ENST00000320031 DIAPH1O60610 1272 aaKnown RBP20.85■□□□□ 0.93
ITGA3-202ENST00000320031 HSCBQ8IWL3 235 aa20.85■□□□□ 0.93
ITGA3-202ENST00000320031 FANCIQ9NVI1 1328 aa20.82■□□□□ 0.92
ITGA3-202ENST00000320031 RUNDC1Q96C34 613 aa20.82■□□□□ 0.92
ITGA3-202ENST00000320031 RPGRIP1LQ68CZ1 1315 aa20.81■□□□□ 0.92
ITGA3-202ENST00000320031 MCCP23508 829 aa20.81■□□□□ 0.92
ITGA3-202ENST00000320031 HDAC5Q9UQL6 1122 aa20.81■□□□□ 0.92
ITGA3-202ENST00000320031 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
ITGA3-202ENST00000320031 HMMRO75330 724 aa20.8■□□□□ 0.92
ITGA3-202ENST00000320031 CENPQQ7L2Z9 268 aaPredicted RBP20.79■□□□□ 0.92
ITGA3-202ENST00000320031 RAPGEF3O95398 923 aa20.79■□□□□ 0.92
ITGA3-202ENST00000320031 KCNJ4P48050 445 aa20.79■□□□□ 0.92
ITGA3-202ENST00000320031 ZKSCAN2Q63HK3 967 aa20.78■□□□□ 0.92
ITGA3-202ENST00000320031 LTV1Q96GA3 475 aaPredicted RBP20.78■□□□□ 0.92
ITGA3-202ENST00000320031 CABP2Q9NPB3 220 aa20.78■□□□□ 0.92
ITGA3-202ENST00000320031 RAPGEF6Q8TEU7 1601 aa20.78■□□□□ 0.92
ITGA3-202ENST00000320031 EXOC6Q8TAG9 804 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms