RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CCDC184Q52MB2 194 aa10.55□□□□□ -0.72
TRIM55-202ENST00000315962 SHANK2Q9UPX8 1470 aa10.55□□□□□ -0.72
TRIM55-202ENST00000315962 CHGAP10645 457 aaKnown RBP10.55□□□□□ -0.72
TRIM55-202ENST00000315962 CROCC2H7BZ55 1655 aa10.54□□□□□ -0.72
TRIM55-202ENST00000315962 FAM135AQ9P2D6 1515 aa10.54□□□□□ -0.72
TRIM55-202ENST00000315962 ADGRL1O94910 1474 aa10.54□□□□□ -0.72
TRIM55-202ENST00000315962 CCDC144AA2RUR9 1427 aa10.54□□□□□ -0.72
TRIM55-202ENST00000315962 CD109Q6YHK3 1445 aa10.54□□□□□ -0.72
TRIM55-202ENST00000315962 KIF7Q2M1P5 1343 aa10.54□□□□□ -0.72
TRIM55-202ENST00000315962 FAM69CQ0P6D2 419 aa10.54□□□□□ -0.72
TRIM55-202ENST00000315962 ADGBQ8N7X0 1667 aa10.53□□□□□ -0.72
TRIM55-202ENST00000315962 NUTM2DQ5VT03 806 aaPredicted RBP10.53□□□□□ -0.72
TRIM55-202ENST00000315962 MYO5CQ9NQX4 1742 aa10.53□□□□□ -0.72
TRIM55-202ENST00000315962 ARHGEF5Q12774 1597 aa10.52□□□□□ -0.72
TRIM55-202ENST00000315962 USP47Q96K76 1375 aa10.52□□□□□ -0.73
TRIM55-202ENST00000315962 NEFLP07196 543 aa10.51□□□□□ -0.73
TRIM55-202ENST00000315962 AEBP2Q6ZN18 517 aaPredicted RBP10.51□□□□□ -0.73
TRIM55-202ENST00000315962 PLA2R1Q13018 1463 aa10.51□□□□□ -0.73
TRIM55-202ENST00000315962 ROCK2O75116 1388 aaKnown RBP10.5□□□□□ -0.73
TRIM55-202ENST00000315962 FAM9BQ8IZU0 186 aa10.5□□□□□ -0.73
TRIM55-202ENST00000315962 RBM19Q9Y4C8 960 aaKnown RBP10.5□□□□□ -0.73
TRIM55-202ENST00000315962 ABCC1P33527 1531 aa10.5□□□□□ -0.73
TRIM55-202ENST00000315962 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
TRIM55-202ENST00000315962 CCDC7Q96M83 1385 aa10.49□□□□□ -0.73
TRIM55-202ENST00000315962 MLECQ14165 292 aa10.47□□□□□ -0.73
TRIM55-202ENST00000315962 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
TRIM55-202ENST00000315962 WASHC2CQ9Y4E1 1318 aa10.46□□□□□ -0.73
TRIM55-202ENST00000315962 DUOX2Q9NRD8 1548 aa10.46□□□□□ -0.74
TRIM55-202ENST00000315962 SPATA31E1Q6ZUB1 1445 aa10.46□□□□□ -0.74
TRIM55-202ENST00000315962 HNRNPUQ00839 825 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRIM55-202ENST00000315962 PRKRIP1Q9H875 184 aaPredicted RBP10.44□□□□□ -0.74
TRIM55-202ENST00000315962 MRS2Q9HD23 443 aa10.44□□□□□ -0.74
TRIM55-202ENST00000315962 PLPPR3Q6T4P5 718 aa10.44□□□□□ -0.74
TRIM55-202ENST00000315962 ERBINQ96RT1 1412 aa10.44□□□□□ -0.74
TRIM55-202ENST00000315962 DHX29Q7Z478 1369 aaKnown RBP10.44□□□□□ -0.74
TRIM55-202ENST00000315962 ZFYVE16Q7Z3T8 1539 aa10.43□□□□□ -0.74
TRIM55-202ENST00000315962 KANK1Q14678 1352 aa10.43□□□□□ -0.74
TRIM55-202ENST00000315962 ATP7AQ04656 1500 aa10.43□□□□□ -0.74
TRIM55-202ENST00000315962 MSH5O43196 834 aa10.42□□□□□ -0.74
TRIM55-202ENST00000315962 CFAP70Q5T0N1 1121 aa10.42□□□□□ -0.74
TRIM55-202ENST00000315962 UGGT1Q9NYU2 1555 aa10.42□□□□□ -0.74
TRIM55-202ENST00000315962 A2MP01023 1474 aa10.41□□□□□ -0.74
TRIM55-202ENST00000315962 ABCA9Q8IUA7 1624 aa10.41□□□□□ -0.74
TRIM55-202ENST00000315962 ADGRF5Q8IZF2 1346 aa10.4□□□□□ -0.74
TRIM55-202ENST00000315962 RTEL1-TNFRSF6BF6WH68 1400 aa10.4□□□□□ -0.74
TRIM55-202ENST00000315962 KDM5DQ9BY66 1539 aa10.4□□□□□ -0.74
TRIM55-202ENST00000315962 CCER2I3L3R5 266 aa10.4□□□□□ -0.74
TRIM55-202ENST00000315962 CC2D1BQ5T0F9 858 aaKnown RBP10.4□□□□□ -0.74
TRIM55-202ENST00000315962 TMEM132EQ6IEE7 984 aa10.4□□□□□ -0.74
TRIM55-202ENST00000315962 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.74
TRIM55-202ENST00000315962 FBXO31Q5XUX0 539 aaPredicted RBP10.4□□□□□ -0.75
TRIM55-202ENST00000315962 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.75
TRIM55-202ENST00000315962 PRAG1Q86YV5 1406 aa10.39□□□□□ -0.75
TRIM55-202ENST00000315962 YEATS2Q9ULM3 1422 aa10.39□□□□□ -0.75
TRIM55-202ENST00000315962 MAST1Q9Y2H9 1570 aa10.39□□□□□ -0.75
TRIM55-202ENST00000315962 SALL2Q9Y467 1007 aaPredicted RBP10.39□□□□□ -0.75
TRIM55-202ENST00000315962 PLXNC1O60486 1568 aa10.39□□□□□ -0.75
TRIM55-202ENST00000315962 SAFB2Q14151 953 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRIM55-202ENST00000315962 CFAP65Q6ZU64 1925 aaKnown RBP10.38□□□□□ -0.75
TRIM55-202ENST00000315962 POGZQ7Z3K3 1410 aa10.37□□□□□ -0.75
TRIM55-202ENST00000315962 ATP10AO60312 1499 aa10.37□□□□□ -0.75
TRIM55-202ENST00000315962 UHRF1BP1Q6BDS2 1440 aa10.37□□□□□ -0.75
TRIM55-202ENST00000315962 BCORL1Q5H9F3 1711 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 DISP3Q9P2K9 1392 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 TESK2Q96S53 571 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 TRAK1Q9UPV9 953 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 UNC13BO14795 1591 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 PANK3Q9H999 370 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 RIMBP3CA6NJZ7 1639 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 RIMBP3BA6NNM3 1639 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 RIMBP3Q9UFD9 1639 aa10.36□□□□□ -0.75
TRIM55-202ENST00000315962 RALGAPBQ86X10 1494 aa10.35□□□□□ -0.75
TRIM55-202ENST00000315962 IQGAP3Q86VI3 1631 aa10.35□□□□□ -0.75
TRIM55-202ENST00000315962 IDI1Q13907 227 aa10.34□□□□□ -0.75
TRIM55-202ENST00000315962 TMC1Q8TDI8 760 aa10.34□□□□□ -0.75
TRIM55-202ENST00000315962 STK26Q9P289 416 aa10.34□□□□□ -0.75
TRIM55-202ENST00000315962 ARAP3Q8WWN8 1544 aa10.34□□□□□ -0.75
TRIM55-202ENST00000315962 KIDINS220Q9ULH0 1771 aa10.34□□□□□ -0.75
TRIM55-202ENST00000315962 ARID4BQ4LE39 1312 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-202ENST00000315962 E9PCH4 1651 aa10.33□□□□□ -0.76
TRIM55-202ENST00000315962 TRHP20396 242 aaPredicted RBP10.33□□□□□ -0.76
TRIM55-202ENST00000315962 INO80Q9ULG1 1556 aaPredicted RBP10.33□□□□□ -0.76
TRIM55-202ENST00000315962 MAGI2Q86UL8 1455 aa10.33□□□□□ -0.76
TRIM55-202ENST00000315962 B4GALNT3Q6L9W6 998 aa10.33□□□□□ -0.76
TRIM55-202ENST00000315962 ERICH6Q7L0X2 663 aa10.33□□□□□ -0.76
TRIM55-202ENST00000315962 KDM5CP41229 1560 aa10.33□□□□□ -0.76
TRIM55-202ENST00000315962 PRDM15P57071 1507 aaPredicted RBP10.32□□□□□ -0.76
TRIM55-202ENST00000315962 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
TRIM55-202ENST00000315962 NPATQ14207 1427 aa10.32□□□□□ -0.76
TRIM55-202ENST00000315962 TMF1P82094 1093 aa10.32□□□□□ -0.76
TRIM55-202ENST00000315962 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
TRIM55-202ENST00000315962 PTPRTO14522 1441 aa10.3□□□□□ -0.76
TRIM55-202ENST00000315962 NOS1P29475 1434 aa10.3□□□□□ -0.76
TRIM55-202ENST00000315962 CLTCL1P53675 1640 aa10.29□□□□□ -0.76
TRIM55-202ENST00000315962 MLH3Q9UHC1 1453 aa10.29□□□□□ -0.76
TRIM55-202ENST00000315962 FRMPD1Q5SYB0 1578 aa10.29□□□□□ -0.76
TRIM55-202ENST00000315962 TNNT2P45379 298 aaPredicted RBP10.29□□□□□ -0.76
TRIM55-202ENST00000315962 COL17A1Q9UMD9 1497 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-202ENST00000315962 PER1O15534 1290 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-202ENST00000315962 MROH1Q8NDA8 1641 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms