RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 CAGE1Q8TC20 777 aa14.97□□□□□ -0.01
PDE12-201ENST00000311180 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
PDE12-201ENST00000311180 REC8O95072 547 aa14.97□□□□□ -0.01
PDE12-201ENST00000311180 HOMER1Q86YM7 354 aa14.97□□□□□ -0.01
PDE12-201ENST00000311180 STK31Q9BXU1 1019 aa14.96□□□□□ -0.01
PDE12-201ENST00000311180 CCP110O43303 1012 aa14.96□□□□□ -0.01
PDE12-201ENST00000311180 LMOD3Q0VAK6 560 aa14.96□□□□□ -0.01
PDE12-201ENST00000311180 PKNOX2Q96KN3 472 aa14.96□□□□□ -0.02
PDE12-201ENST00000311180 NAT10Q9H0A0 1025 aaKnown RBP14.95□□□□□ -0.02
PDE12-201ENST00000311180 PES1O00541 588 aaKnown RBP14.94□□□□□ -0.02
PDE12-201ENST00000311180 CCDC173Q0VFZ6 552 aa14.94□□□□□ -0.02
PDE12-201ENST00000311180 GOLGA6L7A0A1B0GV03 622 aa14.94□□□□□ -0.02
PDE12-201ENST00000311180 INCENPQ9NQS7 918 aa14.93□□□□□ -0.02
PDE12-201ENST00000311180 GORABQ5T7V8 394 aa14.93□□□□□ -0.02
PDE12-201ENST00000311180 CPLX2Q6PUV4 134 aaKnown RBP14.93□□□□□ -0.02
PDE12-201ENST00000311180 MNS1Q8NEH6 495 aa14.93□□□□□ -0.02
PDE12-201ENST00000311180 CCDC47Q96A33 483 aaKnown RBP14.93□□□□□ -0.02
PDE12-201ENST00000311180 ZRSR2Q15696 482 aaKnown RBP14.93□□□□□ -0.02
PDE12-201ENST00000311180 CCDC39Q9UFE4 941 aa14.93□□□□□ -0.02
PDE12-201ENST00000311180 SETD5Q9C0A6 1442 aa14.93□□□□□ -0.02
PDE12-201ENST00000311180 LEKR1Q6ZMV7 388 aa14.92□□□□□ -0.02
PDE12-201ENST00000311180 NEXNQ0ZGT2 675 aa14.92□□□□□ -0.02
PDE12-201ENST00000311180 AAMPQ13685 434 aa14.92□□□□□ -0.02
PDE12-201ENST00000311180 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
PDE12-201ENST00000311180 NUCB2P80303 420 aa14.92□□□□□ -0.02
PDE12-201ENST00000311180 PATL2C9JE40 543 aaKnown RBP14.91□□□□□ -0.02
PDE12-201ENST00000311180 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
PDE12-201ENST00000311180 NGEFQ8N5V2 710 aa14.91□□□□□ -0.02
PDE12-201ENST00000311180 FAM184AQ8NB25 1140 aa14.91□□□□□ -0.02
PDE12-201ENST00000311180 ZNF592Q92610 1267 aa14.91□□□□□ -0.02
PDE12-201ENST00000311180 ARHGAP35Q9NRY4 1499 aa14.91□□□□□ -0.02
PDE12-201ENST00000311180 CREBRFQ8IUR6 639 aa14.91□□□□□ -0.02
PDE12-201ENST00000311180 CAVIN1Q6NZI2 390 aaKnown RBP14.9□□□□□ -0.02
PDE12-201ENST00000311180 TMX4Q9H1E5 349 aaPredicted RBP14.9□□□□□ -0.02
PDE12-201ENST00000311180 SMC4Q9NTJ3 1288 aa14.9□□□□□ -0.02
PDE12-201ENST00000311180 CGNL1Q0VF96 1302 aa14.9□□□□□ -0.02
PDE12-201ENST00000311180 MRE11P49959 708 aa14.89□□□□□ -0.03
PDE12-201ENST00000311180 STK11IPQ8N1F8 1099 aa14.89□□□□□ -0.03
PDE12-201ENST00000311180 NLRP13Q86W25 1043 aa14.89□□□□□ -0.03
PDE12-201ENST00000311180 LETM1O95202 739 aaPredicted RBP14.88□□□□□ -0.03
PDE12-201ENST00000311180 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
PDE12-201ENST00000311180 TSPYL1Q9H0U9 437 aa14.88□□□□□ -0.03
PDE12-201ENST00000311180 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
PDE12-201ENST00000311180 AKAP17AQ02040 695 aaKnown RBP14.88□□□□□ -0.03
PDE12-201ENST00000311180 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.88□□□□□ -0.03
PDE12-201ENST00000311180 RUFY2Q8WXA3 655 aa14.88□□□□□ -0.03
PDE12-201ENST00000311180 CHMP5Q9NZZ3 219 aa14.88□□□□□ -0.03
PDE12-201ENST00000311180 RRP9O43818 475 aaKnown RBP14.87□□□□□ -0.03
PDE12-201ENST00000311180 KAT6BQ8WYB5 2073 aa14.87□□□□□ -0.03
PDE12-201ENST00000311180 ROCK1Q13464 1354 aa14.87□□□□□ -0.03
PDE12-201ENST00000311180 ZKSCAN1P17029 563 aaPredicted RBP14.86□□□□□ -0.03
PDE12-201ENST00000311180 IFT57Q9NWB7 429 aa14.86□□□□□ -0.03
PDE12-201ENST00000311180 DCAF11Q8TEB1 546 aa14.85□□□□□ -0.03
PDE12-201ENST00000311180 NASPP49321 788 aaPredicted RBP14.85□□□□□ -0.03
PDE12-201ENST00000311180 APBB1O00213 710 aa14.85□□□□□ -0.03
PDE12-201ENST00000311180 ZBED9Q6R2W3 1325 aa14.85□□□□□ -0.03
PDE12-201ENST00000311180 PDE4AP27815 886 aa14.85□□□□□ -0.03
PDE12-201ENST00000311180 DEF6Q9H4E7 631 aa14.85□□□□□ -0.03
PDE12-201ENST00000311180 MARCH6O60337 910 aa14.84□□□□□ -0.03
PDE12-201ENST00000311180 SASS6Q6UVJ0 657 aa14.84□□□□□ -0.03
PDE12-201ENST00000311180 SRPK2P78362 688 aaKnown RBP14.84□□□□□ -0.03
PDE12-201ENST00000311180 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
PDE12-201ENST00000311180 ANO8Q9HCE9 1232 aaPredicted RBP14.84□□□□□ -0.03
PDE12-201ENST00000311180 KIF15Q9NS87 1388 aa14.83□□□□□ -0.03
PDE12-201ENST00000311180 KIAA0754O94854 1291 aa14.83□□□□□ -0.03
PDE12-201ENST00000311180 TRIM29Q14134 588 aa14.83□□□□□ -0.04
PDE12-201ENST00000311180 U2AF1L5P0DN76 240 aaPredicted RBP14.83□□□□□ -0.04
PDE12-201ENST00000311180 U2AF1Q01081 240 aaKnown RBP eCLIP14.83□□□□□ -0.04
PDE12-201ENST00000311180 RNF20Q5VTR2 975 aa14.82□□□□□ -0.04
PDE12-201ENST00000311180 SYNE3Q6ZMZ3 975 aa14.82□□□□□ -0.04
PDE12-201ENST00000311180 WRNQ14191 1432 aaPredicted RBP eCLIP14.82□□□□□ -0.04
PDE12-201ENST00000311180 DYDC1Q8WWB3 177 aa14.82□□□□□ -0.04
PDE12-201ENST00000311180 PODXL2Q9NZ53 605 aa14.81□□□□□ -0.04
PDE12-201ENST00000311180 TXLNBQ8N3L3 684 aa14.81□□□□□ -0.04
PDE12-201ENST00000311180 GOLGA6L10A6NI86 522 aa14.81□□□□□ -0.04
PDE12-201ENST00000311180 MBD3O95983 291 aa14.81□□□□□ -0.04
PDE12-201ENST00000311180 TAF7LQ5H9L4 462 aa14.81□□□□□ -0.04
PDE12-201ENST00000311180 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
PDE12-201ENST00000311180 EIF3JO75822 258 aaKnown RBP14.8□□□□□ -0.04
PDE12-201ENST00000311180 RB1CC1Q8TDY2 1594 aa14.79□□□□□ -0.04
PDE12-201ENST00000311180 PCMTD1Q96MG8 357 aaPredicted RBP14.79□□□□□ -0.04
PDE12-201ENST00000311180 SENP3-EIF4A1A0A087X0R7 540 aa14.79□□□□□ -0.04
PDE12-201ENST00000311180 PDE4CQ08493 712 aa14.79□□□□□ -0.04
PDE12-201ENST00000311180 ERLIN2O94905 339 aa14.78□□□□□ -0.04
PDE12-201ENST00000311180 CCDC73Q6ZRK6 1079 aa14.78□□□□□ -0.04
PDE12-201ENST00000311180 PDCL2Q8N4E4 241 aa14.78□□□□□ -0.04
PDE12-201ENST00000311180 LMOD2Q6P5Q4 547 aa14.78□□□□□ -0.04
PDE12-201ENST00000311180 TERF2IPQ9NYB0 399 aa14.78□□□□□ -0.04
PDE12-201ENST00000311180 ODF2Q5BJF6 829 aa14.78□□□□□ -0.04
PDE12-201ENST00000311180 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.05
PDE12-201ENST00000311180 WWC1Q8IX03 1113 aa14.77□□□□□ -0.05
PDE12-201ENST00000311180 LUC7LQ9NQ29 371 aaKnown RBP14.77□□□□□ -0.05
PDE12-201ENST00000311180 TCEAL9Q9UHQ7 104 aa14.77□□□□□ -0.05
PDE12-201ENST00000311180 ANKRD18AQ8IVF6 992 aa14.76□□□□□ -0.05
PDE12-201ENST00000311180 IQCEQ6IPM2 695 aa14.76□□□□□ -0.05
PDE12-201ENST00000311180 BICD2Q8TD16 824 aa14.76□□□□□ -0.05
PDE12-201ENST00000311180 CT47A1Q5JQC4 288 aaPredicted RBP14.76□□□□□ -0.05
PDE12-201ENST00000311180 RABEP1Q15276 862 aa14.76□□□□□ -0.05
PDE12-201ENST00000311180 E9PSI1 815 aa14.76□□□□□ -0.05
PDE12-201ENST00000311180 HSPA5P11021 654 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms