RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 WDR62O43379 1518 aa12.1□□□□□ -0.47
XCR1-201ENST00000309285 TMF1P82094 1093 aa12.1□□□□□ -0.47
XCR1-201ENST00000309285 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
XCR1-201ENST00000309285 KNSTRNQ9Y448 316 aa12.1□□□□□ -0.47
XCR1-201ENST00000309285 KANK1Q14678 1352 aa12.1□□□□□ -0.47
XCR1-201ENST00000309285 DISP1Q96F81 1524 aa12.1□□□□□ -0.47
XCR1-201ENST00000309285 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
XCR1-201ENST00000309285 AFAP1Q8N556 730 aa12.09□□□□□ -0.47
XCR1-201ENST00000309285 AKNAQ7Z591 1439 aa12.09□□□□□ -0.47
XCR1-201ENST00000309285 KIAA1107Q9UPP5 1409 aa12.09□□□□□ -0.47
XCR1-201ENST00000309285 KIAA0556O60303 1618 aa12.08□□□□□ -0.47
XCR1-201ENST00000309285 MAGI3Q5TCQ9 1506 aa12.08□□□□□ -0.48
XCR1-201ENST00000309285 GPATCH8Q9UKJ3 1502 aaKnown RBP12.08□□□□□ -0.48
XCR1-201ENST00000309285 RAPGEF6Q8TEU7 1601 aa12.08□□□□□ -0.48
XCR1-201ENST00000309285 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
XCR1-201ENST00000309285 ARHGAP5Q13017 1502 aa12.07□□□□□ -0.48
XCR1-201ENST00000309285 CDCA8Q53HL2 280 aa12.07□□□□□ -0.48
XCR1-201ENST00000309285 C11orf95C9JLR9 678 aaPredicted RBP12.06□□□□□ -0.48
XCR1-201ENST00000309285 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
XCR1-201ENST00000309285 TCOF1Q13428 1488 aaKnown RBP12.06□□□□□ -0.48
XCR1-201ENST00000309285 ATP10BO94823 1461 aa12.05□□□□□ -0.48
XCR1-201ENST00000309285 CNTLNQ9NXG0 1405 aa12.05□□□□□ -0.48
XCR1-201ENST00000309285 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
XCR1-201ENST00000309285 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.48
XCR1-201ENST00000309285 CCDC184Q52MB2 194 aa12.02□□□□□ -0.48
XCR1-201ENST00000309285 PKNOX2Q96KN3 472 aa12.02□□□□□ -0.48
XCR1-201ENST00000309285 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
XCR1-201ENST00000309285 ARID3AQ99856 593 aa12.02□□□□□ -0.49
XCR1-201ENST00000309285 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.49
XCR1-201ENST00000309285 BECN1Q14457 450 aa12.02□□□□□ -0.49
XCR1-201ENST00000309285 RALBP1Q15311 655 aa12.02□□□□□ -0.49
XCR1-201ENST00000309285 NUP160Q12769 1436 aa12.01□□□□□ -0.49
XCR1-201ENST00000309285 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
XCR1-201ENST00000309285 NBPF1Q3BBV0 1214 aa12.01□□□□□ -0.49
XCR1-201ENST00000309285 LMOD2Q6P5Q4 547 aa12.01□□□□□ -0.49
XCR1-201ENST00000309285 KIF14Q15058 1648 aa12□□□□□ -0.49
XCR1-201ENST00000309285 DNTTIP2Q5QJE6 756 aaKnown RBP12□□□□□ -0.49
XCR1-201ENST00000309285 HSP90AA2PQ14568 343 aaPredicted RBP12□□□□□ -0.49
XCR1-201ENST00000309285 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
XCR1-201ENST00000309285 PANK3Q9H999 370 aa11.98□□□□□ -0.49
XCR1-201ENST00000309285 NLRP13Q86W25 1043 aa11.98□□□□□ -0.49
XCR1-201ENST00000309285 CEP170Q5SW79 1584 aa11.97□□□□□ -0.49
XCR1-201ENST00000309285 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
XCR1-201ENST00000309285 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
XCR1-201ENST00000309285 WASHC2CQ9Y4E1 1318 aa11.96□□□□□ -0.49
XCR1-201ENST00000309285 A0A0U1RQG5 324 aaPredicted RBP11.96□□□□□ -0.49
XCR1-201ENST00000309285 ZBED9Q6R2W3 1325 aa11.96□□□□□ -0.49
XCR1-201ENST00000309285 MYH16Q9H6N6 1097 aa11.96□□□□□ -0.5
XCR1-201ENST00000309285 SAFB2Q14151 953 aaKnown RBP eCLIP11.95□□□□□ -0.5
XCR1-201ENST00000309285 MYBBP1AQ9BQG0 1328 aaKnown RBP11.95□□□□□ -0.5
XCR1-201ENST00000309285 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
XCR1-201ENST00000309285 CYB5RLQ6IPT4 315 aa11.95□□□□□ -0.5
XCR1-201ENST00000309285 PLEKHH2Q8IVE3 1493 aa11.94□□□□□ -0.5
XCR1-201ENST00000309285 PODXL2Q9NZ53 605 aa11.94□□□□□ -0.5
XCR1-201ENST00000309285 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
XCR1-201ENST00000309285 NUDCQ9Y266 331 aa11.94□□□□□ -0.5
XCR1-201ENST00000309285 MLECQ14165 292 aa11.93□□□□□ -0.5
XCR1-201ENST00000309285 SCAPERQ9BY12 1400 aa11.93□□□□□ -0.5
XCR1-201ENST00000309285 L1TD1Q5T7N2 865 aaKnown RBP11.93□□□□□ -0.5
XCR1-201ENST00000309285 IPO9Q96P70 1041 aaKnown RBP11.93□□□□□ -0.5
XCR1-201ENST00000309285 DNMT1P26358 1616 aaKnown RBP11.92□□□□□ -0.5
XCR1-201ENST00000309285 STK26Q9P289 416 aa11.91□□□□□ -0.5
XCR1-201ENST00000309285 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
XCR1-201ENST00000309285 ITSN2Q9NZM3 1697 aa11.91□□□□□ -0.5
XCR1-201ENST00000309285 POGKQ9P215 609 aa11.9□□□□□ -0.5
XCR1-201ENST00000309285 KDM6BO15054 1643 aa11.89□□□□□ -0.51
XCR1-201ENST00000309285 RGS3P49796 1198 aa11.89□□□□□ -0.51
XCR1-201ENST00000309285 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
XCR1-201ENST00000309285 EIF3AQ14152 1382 aaKnown RBP11.89□□□□□ -0.51
XCR1-201ENST00000309285 PZPP20742 1482 aa11.89□□□□□ -0.51
XCR1-201ENST00000309285 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
XCR1-201ENST00000309285 IL27Q8NEV9 243 aa11.88□□□□□ -0.51
XCR1-201ENST00000309285 GOLGA6L22H0YM25 854 aa11.88□□□□□ -0.51
XCR1-201ENST00000309285 RCAN3Q9UKA8 241 aa11.88□□□□□ -0.51
XCR1-201ENST00000309285 TAOK2Q9UL54 1235 aa11.88□□□□□ -0.51
XCR1-201ENST00000309285 CFAP70Q5T0N1 1121 aa11.88□□□□□ -0.51
XCR1-201ENST00000309285 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
XCR1-201ENST00000309285 FANCIQ9NVI1 1328 aa11.87□□□□□ -0.51
XCR1-201ENST00000309285 SOX12O15370 315 aa11.87□□□□□ -0.51
XCR1-201ENST00000309285 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
XCR1-201ENST00000309285 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
XCR1-201ENST00000309285 SRPK2P78362 688 aaKnown RBP11.87□□□□□ -0.51
XCR1-201ENST00000309285 MSNP26038 577 aaKnown RBP11.86□□□□□ -0.51
XCR1-201ENST00000309285 SYCP2Q9BX26 1530 aa11.86□□□□□ -0.51
XCR1-201ENST00000309285 PNISRQ8TF01 805 aaKnown RBP11.86□□□□□ -0.51
XCR1-201ENST00000309285 GZF1Q9H116 711 aaPredicted RBP11.86□□□□□ -0.51
XCR1-201ENST00000309285 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
XCR1-201ENST00000309285 STAC3Q96MF2 364 aa11.85□□□□□ -0.51
XCR1-201ENST00000309285 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
XCR1-201ENST00000309285 RAPGEF3O95398 923 aa11.84□□□□□ -0.51
XCR1-201ENST00000309285 PLCH2O75038 1416 aa11.83□□□□□ -0.52
XCR1-201ENST00000309285 ADGRL2O95490 1459 aa11.83□□□□□ -0.52
XCR1-201ENST00000309285 CCDC146Q8IYE0 955 aa11.83□□□□□ -0.52
XCR1-201ENST00000309285 LRRIQ1Q96JM4 1722 aa11.83□□□□□ -0.52
XCR1-201ENST00000309285 TEX14Q8IWB6 1497 aa11.83□□□□□ -0.52
XCR1-201ENST00000309285 NPHP1O15259 732 aa11.82□□□□□ -0.52
XCR1-201ENST00000309285 BRD4O60885 1362 aaPredicted RBP11.82□□□□□ -0.52
XCR1-201ENST00000309285 TMEM132EQ6IEE7 984 aa11.82□□□□□ -0.52
XCR1-201ENST00000309285 SHANK2Q9UPX8 1470 aa11.82□□□□□ -0.52
XCR1-201ENST00000309285 PDE3BQ13370 1112 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms