RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 FAM135AQ9P2D6 1515 aa28.26■■■□□ 2.11
RELA-201ENST00000308639 CCDC141Q6ZP82 1450 aa28.26■■■□□ 2.11
RELA-201ENST00000308639 NUDCQ9Y266 331 aa28.26■■■□□ 2.11
RELA-201ENST00000308639 NBPF1Q3BBV0 1214 aa28.25■■■□□ 2.11
RELA-201ENST00000308639 ARHGEF5Q12774 1597 aa28.24■■■□□ 2.11
RELA-201ENST00000308639 SYCP2Q9BX26 1530 aa28.22■■■□□ 2.11
RELA-201ENST00000308639 PREX2Q70Z35 1606 aa28.2■■■□□ 2.1
RELA-201ENST00000308639 SALL2Q9Y467 1007 aaPredicted RBP28.2■■■□□ 2.1
RELA-201ENST00000308639 FANCIQ9NVI1 1328 aa28.19■■■□□ 2.1
RELA-201ENST00000308639 TTC37Q6PGP7 1564 aa28.17■■■□□ 2.1
RELA-201ENST00000308639 CCDC144AA2RUR9 1427 aa28.17■■■□□ 2.1
RELA-201ENST00000308639 ARHGAP5Q13017 1502 aa28.16■■■□□ 2.1
RELA-201ENST00000308639 PLA2R1Q13018 1463 aa28.14■■■□□ 2.1
RELA-201ENST00000308639 PRAG1Q86YV5 1406 aa28.14■■■□□ 2.09
RELA-201ENST00000308639 MYBBP1AQ9BQG0 1328 aaKnown RBP28.13■■■□□ 2.09
RELA-201ENST00000308639 ERCC6L2Q5T890 1561 aa28.12■■■□□ 2.09
RELA-201ENST00000308639 PLEKHH2Q8IVE3 1493 aa28.11■■■□□ 2.09
RELA-201ENST00000308639 CHD1O14646 1710 aa28.11■■■□□ 2.09
RELA-201ENST00000308639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.1■■■□□ 2.09
RELA-201ENST00000308639 TRPM1Q7Z4N2 1603 aa28.09■■■□□ 2.09
RELA-201ENST00000308639 RNF123Q5XPI4 1314 aa28.09■■■□□ 2.09
RELA-201ENST00000308639 LRPPRCP42704 1394 aaKnown RBP28.09■■■□□ 2.09
RELA-201ENST00000308639 E9PCH4 1651 aa28.09■■■□□ 2.09
RELA-201ENST00000308639 A2MP01023 1474 aa28.08■■■□□ 2.09
RELA-201ENST00000308639 CCDC136Q96JN2 1154 aa28.07■■■□□ 2.08
RELA-201ENST00000308639 RALBP1Q15311 655 aa28.07■■■□□ 2.08
RELA-201ENST00000308639 BRD4O60885 1362 aaPredicted RBP28.07■■■□□ 2.08
RELA-201ENST00000308639 RSPH4AQ5TD94 716 aa28.06■■■□□ 2.08
RELA-201ENST00000308639 CC2D1BQ5T0F9 858 aaKnown RBP28.05■■■□□ 2.08
RELA-201ENST00000308639 DISP3Q9P2K9 1392 aa28.04■■■□□ 2.08
RELA-201ENST00000308639 ERICH6Q7L0X2 663 aa28.02■■■□□ 2.08
RELA-201ENST00000308639 UNC13BO14795 1591 aa28.01■■■□□ 2.07
RELA-201ENST00000308639 PER1O15534 1290 aaPredicted RBP28.01■■■□□ 2.07
RELA-201ENST00000308639 TESK2Q96S53 571 aa28■■■□□ 2.07
RELA-201ENST00000308639 KTN1Q86UP2 1357 aaKnown RBP27.99■■■□□ 2.07
RELA-201ENST00000308639 PRKCSHP14314 528 aaPredicted RBP27.99■■■□□ 2.07
RELA-201ENST00000308639 PARD3Q8TEW0 1356 aa27.98■■■□□ 2.07
RELA-201ENST00000308639 NLRP13Q86W25 1043 aa27.97■■■□□ 2.07
RELA-201ENST00000308639 MYO5CQ9NQX4 1742 aa27.96■■■□□ 2.07
RELA-201ENST00000308639 PANK3Q9H999 370 aa27.95■■■□□ 2.07
RELA-201ENST00000308639 MAST1Q9Y2H9 1570 aa27.95■■■□□ 2.07
RELA-201ENST00000308639 CDCA7LQ96GN5 454 aa27.95■■■□□ 2.06
RELA-201ENST00000308639 GPRASP1Q5JY77 1395 aa27.94■■■□□ 2.06
RELA-201ENST00000308639 COL17A1Q9UMD9 1497 aaPredicted RBP27.93■■■□□ 2.06
RELA-201ENST00000308639 IQGAP3Q86VI3 1631 aa27.92■■■□□ 2.06
RELA-201ENST00000308639 ABCC2Q92887 1545 aa27.92■■■□□ 2.06
RELA-201ENST00000308639 EXOC6Q8TAG9 804 aa27.91■■■□□ 2.06
RELA-201ENST00000308639 SHROOM2Q13796 1616 aa27.9■■■□□ 2.06
RELA-201ENST00000308639 RRP1P56182 461 aaKnown RBP27.9■■■□□ 2.06
RELA-201ENST00000308639 PRDM15P57071 1507 aaPredicted RBP27.9■■■□□ 2.06
RELA-201ENST00000308639 PLXNC1O60486 1568 aa27.89■■■□□ 2.06
RELA-201ENST00000308639 ERBINQ96RT1 1412 aa27.89■■■□□ 2.06
RELA-201ENST00000308639 RCAN3Q9UKA8 241 aa27.88■■■□□ 2.05
RELA-201ENST00000308639 TRAPPC8Q9Y2L5 1435 aa27.88■■■□□ 2.05
RELA-201ENST00000308639 DUOX2Q9NRD8 1548 aa27.86■■■□□ 2.05
RELA-201ENST00000308639 AFAP1Q8N556 730 aa27.84■■■□□ 2.05
RELA-201ENST00000308639 TMF1P82094 1093 aa27.83■■■□□ 2.05
RELA-201ENST00000308639 PAK3O75914 559 aaPredicted RBP27.83■■■□□ 2.05
RELA-201ENST00000308639 EFCAB2Q5VUJ9 269 aa27.83■■■□□ 2.05
RELA-201ENST00000308639 PLCH2O75038 1416 aa27.82■■■□□ 2.04
RELA-201ENST00000308639 PLIN1O60240 522 aa27.81■■■□□ 2.04
RELA-201ENST00000308639 MAGI2Q86UL8 1455 aa27.79■■■□□ 2.04
RELA-201ENST00000308639 ZCCHC11Q5TAX3 1644 aaKnown RBP27.79■■■□□ 2.04
RELA-201ENST00000308639 LAMC1P11047 1609 aa27.78■■■□□ 2.04
RELA-201ENST00000308639 EIF2AK4Q9P2K8 1649 aaKnown RBP27.76■■■□□ 2.04
RELA-201ENST00000308639 ATP10AO60312 1499 aa27.76■■■□□ 2.03
RELA-201ENST00000308639 ABCC1P33527 1531 aa27.75■■■□□ 2.03
RELA-201ENST00000308639 SPAG9O60271 1321 aaKnown RBP27.74■■■□□ 2.03
RELA-201ENST00000308639 NOP58Q9Y2X3 529 aaKnown RBP27.74■■■□□ 2.03
RELA-201ENST00000308639 ADAMTS8Q9UP79 889 aa27.72■■■□□ 2.03
RELA-201ENST00000308639 PDE3BQ13370 1112 aa27.71■■■□□ 2.03
RELA-201ENST00000308639 SKAP1Q86WV1 359 aa27.71■■■□□ 2.03
RELA-201ENST00000308639 RNF17Q9BXT8 1623 aaKnown RBP27.7■■■□□ 2.02
RELA-201ENST00000308639 WASHC2CQ9Y4E1 1318 aa27.69■■■□□ 2.02
RELA-201ENST00000308639 BLMP54132 1417 aaPredicted RBP27.69■■■□□ 2.02
RELA-201ENST00000308639 WDR7Q9Y4E6 1490 aa27.68■■■□□ 2.02
RELA-201ENST00000308639 NBR1Q14596 966 aa27.67■■■□□ 2.02
RELA-201ENST00000308639 MADDQ8WXG6 1647 aa27.67■■■□□ 2.02
RELA-201ENST00000308639 MYT1LQ9UL68 1186 aa27.66■■■□□ 2.02
RELA-201ENST00000308639 KNSTRNQ9Y448 316 aa27.65■■■□□ 2.02
RELA-201ENST00000308639 PPP2R1AP30153 589 aa27.64■■■□□ 2.02
RELA-201ENST00000308639 NPM2Q86SE8 214 aaKnown RBP27.64■■■□□ 2.02
RELA-201ENST00000308639 ANP32AP39687 249 aaKnown RBP27.64■■■□□ 2.01
RELA-201ENST00000308639 CRBNQ96SW2 442 aa27.63■■■□□ 2.01
RELA-201ENST00000308639 CLTCL1P53675 1640 aa27.62■■■□□ 2.01
RELA-201ENST00000308639 C20orf194Q5TEA3 1177 aa27.62■■■□□ 2.01
RELA-201ENST00000308639 ZFYVE16Q7Z3T8 1539 aa27.61■■■□□ 2.01
RELA-201ENST00000308639 AMER1Q5JTC6 1135 aaPredicted RBP27.61■■■□□ 2.01
RELA-201ENST00000308639 IPO9Q96P70 1041 aaKnown RBP27.6■■■□□ 2.01
RELA-201ENST00000308639 IQGAP1P46940 1657 aa27.6■■■□□ 2.01
RELA-201ENST00000308639 KIF3BO15066 747 aa27.59■■■□□ 2.01
RELA-201ENST00000308639 TRPM2O94759 1503 aa27.58■■■□□ 2.01
RELA-201ENST00000308639 PLEKHH1Q9ULM0 1364 aa27.58■■■□□ 2.01
RELA-201ENST00000308639 SPHKAPQ2M3C7 1700 aa27.57■■■□□ 2
RELA-201ENST00000308639 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
RELA-201ENST00000308639 ZMYM4Q5VZL5 1548 aa27.56■■■□□ 2
RELA-201ENST00000308639 UHRF1BP1LA0JNW5 1464 aa27.56■■■□□ 2
RELA-201ENST00000308639 UGGT1Q9NYU2 1555 aa27.56■■■□□ 2
RELA-201ENST00000308639 WDR43Q15061 677 aaKnown RBP eCLIP27.55■■■□□ 2
RELA-201ENST00000308639 SCAF11Q99590 1463 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms