RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
CTTN-201ENST00000301843 CC2D1BQ5T0F9 858 aaKnown RBP18.19■□□□□ 0.5
CTTN-201ENST00000301843 ANP32AP39687 249 aaKnown RBP18.18■□□□□ 0.5
CTTN-201ENST00000301843 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
CTTN-201ENST00000301843 PTPRGP23470 1445 aa18.16■□□□□ 0.5
CTTN-201ENST00000301843 ARHGEF5Q12774 1597 aa18.15■□□□□ 0.5
CTTN-201ENST00000301843 KDM5DQ9BY66 1539 aa18.15■□□□□ 0.5
CTTN-201ENST00000301843 TSPY4P0CV99 314 aa18.14■□□□□ 0.49
CTTN-201ENST00000301843 TSPY10P0CW01 314 aa18.14■□□□□ 0.49
CTTN-201ENST00000301843 ZBTB47Q9UFB7 747 aaPredicted RBP18.13■□□□□ 0.49
CTTN-201ENST00000301843 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
CTTN-201ENST00000301843 KDM5CP41229 1560 aa18.13■□□□□ 0.49
CTTN-201ENST00000301843 ROCK2O75116 1388 aaKnown RBP18.13■□□□□ 0.49
CTTN-201ENST00000301843 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
CTTN-201ENST00000301843 IPO9Q96P70 1041 aaKnown RBP18.12■□□□□ 0.49
CTTN-201ENST00000301843 RNF123Q5XPI4 1314 aa18.12■□□□□ 0.49
CTTN-201ENST00000301843 RCAN3Q9UKA8 241 aa18.11■□□□□ 0.49
CTTN-201ENST00000301843 KIF15Q9NS87 1388 aa18.11■□□□□ 0.49
CTTN-201ENST00000301843 MYBBP1AQ9BQG0 1328 aaKnown RBP18.11■□□□□ 0.49
CTTN-201ENST00000301843 SAMD9LQ8IVG5 1584 aa18.1■□□□□ 0.49
CTTN-201ENST00000301843 UHRF1BP1Q6BDS2 1440 aa18.1■□□□□ 0.49
CTTN-201ENST00000301843 CDC42BPBQ9Y5S2 1711 aa18.1■□□□□ 0.49
CTTN-201ENST00000301843 PREX2Q70Z35 1606 aa18.1■□□□□ 0.49
CTTN-201ENST00000301843 CHD1O14646 1710 aa18.09■□□□□ 0.49
CTTN-201ENST00000301843 CCDC141Q6ZP82 1450 aa18.07■□□□□ 0.48
CTTN-201ENST00000301843 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
CTTN-201ENST00000301843 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
CTTN-201ENST00000301843 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
CTTN-201ENST00000301843 RTL5Q5HYW3 569 aaPredicted RBP18.04■□□□□ 0.48
CTTN-201ENST00000301843 ARID4BQ4LE39 1312 aaPredicted RBP18.03■□□□□ 0.48
CTTN-201ENST00000301843 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
CTTN-201ENST00000301843 RALBP1Q15311 655 aa18.02■□□□□ 0.48
CTTN-201ENST00000301843 PANK3Q9H999 370 aa18.02■□□□□ 0.48
CTTN-201ENST00000301843 LRPPRCP42704 1394 aaKnown RBP18.02■□□□□ 0.48
CTTN-201ENST00000301843 PDE4AP27815 886 aa18.02■□□□□ 0.47
CTTN-201ENST00000301843 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
CTTN-201ENST00000301843 C20orf194Q5TEA3 1177 aa18.01■□□□□ 0.47
CTTN-201ENST00000301843 NLRP13Q86W25 1043 aa18.01■□□□□ 0.47
CTTN-201ENST00000301843 FAM135AQ9P2D6 1515 aa18.01■□□□□ 0.47
CTTN-201ENST00000301843 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
CTTN-201ENST00000301843 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
CTTN-201ENST00000301843 KTN1Q86UP2 1357 aaKnown RBP18■□□□□ 0.47
CTTN-201ENST00000301843 SYCP2Q9BX26 1530 aa18■□□□□ 0.47
CTTN-201ENST00000301843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.99■□□□□ 0.474e-6■■■□□ 15.9
CTTN-201ENST00000301843 MAST1Q9Y2H9 1570 aa17.99■□□□□ 0.47
CTTN-201ENST00000301843 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
CTTN-201ENST00000301843 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
CTTN-201ENST00000301843 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
CTTN-201ENST00000301843 ARHGAP5Q13017 1502 aa17.98■□□□□ 0.47
CTTN-201ENST00000301843 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
CTTN-201ENST00000301843 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
CTTN-201ENST00000301843 ABCC2Q92887 1545 aa17.96■□□□□ 0.47
CTTN-201ENST00000301843 UNC13BO14795 1591 aa17.95■□□□□ 0.46
CTTN-201ENST00000301843 CCDC144AA2RUR9 1427 aa17.94■□□□□ 0.46
CTTN-201ENST00000301843 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
CTTN-201ENST00000301843 NEFMP07197 916 aa17.94■□□□□ 0.46
CTTN-201ENST00000301843 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
CTTN-201ENST00000301843 PLXNC1O60486 1568 aa17.92■□□□□ 0.46
CTTN-201ENST00000301843 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
CTTN-201ENST00000301843 BACH2Q9BYV9 841 aa17.92■□□□□ 0.46
CTTN-201ENST00000301843 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
CTTN-201ENST00000301843 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
CTTN-201ENST00000301843 TESK2Q96S53 571 aa17.91■□□□□ 0.46
CTTN-201ENST00000301843 TCERG1O14776 1098 aaKnown RBP17.9■□□□□ 0.46
CTTN-201ENST00000301843 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
CTTN-201ENST00000301843 CCDC146Q8IYE0 955 aa17.9■□□□□ 0.46
CTTN-201ENST00000301843 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
CTTN-201ENST00000301843 PLA2R1Q13018 1463 aa17.9■□□□□ 0.46
CTTN-201ENST00000301843 TRPM1Q7Z4N2 1603 aa17.89■□□□□ 0.45
CTTN-201ENST00000301843 IQGAP3Q86VI3 1631 aa17.89■□□□□ 0.45
CTTN-201ENST00000301843 E9PCH4 1651 aa17.86■□□□□ 0.45
CTTN-201ENST00000301843 DUOX2Q9NRD8 1548 aa17.86■□□□□ 0.45
CTTN-201ENST00000301843 RGS3P49796 1198 aa17.85■□□□□ 0.45
CTTN-201ENST00000301843 PLCH2O75038 1416 aa17.85■□□□□ 0.45
CTTN-201ENST00000301843 ZCCHC11Q5TAX3 1644 aaKnown RBP17.85■□□□□ 0.45
CTTN-201ENST00000301843 A2MP01023 1474 aa17.85■□□□□ 0.45
CTTN-201ENST00000301843 MAGI2Q86UL8 1455 aa17.84■□□□□ 0.45
CTTN-201ENST00000301843 TMF1P82094 1093 aa17.84■□□□□ 0.45
CTTN-201ENST00000301843 ERBINQ96RT1 1412 aa17.83■□□□□ 0.45
CTTN-201ENST00000301843 PDE3BQ13370 1112 aa17.83■□□□□ 0.44
CTTN-201ENST00000301843 UHRF1BP1LA0JNW5 1464 aa17.83■□□□□ 0.44
CTTN-201ENST00000301843 CLASP1Q7Z460 1538 aa17.83■□□□□ 0.44
CTTN-201ENST00000301843 WDR43Q15061 677 aaKnown RBP eCLIP17.82■□□□□ 0.445e-11■□□□□ 10.1
CTTN-201ENST00000301843 GPRASP1Q5JY77 1395 aa17.82■□□□□ 0.44
CTTN-201ENST00000301843 PLEKHH1Q9ULM0 1364 aa17.81■□□□□ 0.44
CTTN-201ENST00000301843 ATP10AO60312 1499 aa17.81■□□□□ 0.44
CTTN-201ENST00000301843 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
CTTN-201ENST00000301843 LAMC1P11047 1609 aa17.81■□□□□ 0.44
CTTN-201ENST00000301843 ABCC1P33527 1531 aa17.8■□□□□ 0.44
CTTN-201ENST00000301843 EFCAB2Q5VUJ9 269 aa17.8■□□□□ 0.44
CTTN-201ENST00000301843 PPP2R1AP30153 589 aa17.79■□□□□ 0.44
CTTN-201ENST00000301843 SPINK5Q9NQ38 1064 aaPredicted RBP17.79■□□□□ 0.44
CTTN-201ENST00000301843 COL17A1Q9UMD9 1497 aaPredicted RBP17.78■□□□□ 0.44
CTTN-201ENST00000301843 PRDM15P57071 1507 aaPredicted RBP17.78■□□□□ 0.44
CTTN-201ENST00000301843 TRAPPC8Q9Y2L5 1435 aa17.77■□□□□ 0.43
CTTN-201ENST00000301843 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.43
CTTN-201ENST00000301843 DUSP27Q5VZP5 1158 aa17.76■□□□□ 0.43
CTTN-201ENST00000301843 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
CTTN-201ENST00000301843 BCAR3O75815 825 aa17.75■□□□□ 0.43
CTTN-201ENST00000301843 ANO8Q9HCE9 1232 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms