RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 HSP90AA2PQ14568 343 aaPredicted RBP14.18□□□□□ -0.14
SNX20-201ENST00000300590 NBPF1Q3BBV0 1214 aa14.18□□□□□ -0.14
SNX20-201ENST00000300590 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
SNX20-201ENST00000300590 WDR43Q15061 677 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNX20-201ENST00000300590 L1TD1Q5T7N2 865 aaKnown RBP14.17□□□□□ -0.14
SNX20-201ENST00000300590 CCDC146Q8IYE0 955 aa14.17□□□□□ -0.14
SNX20-201ENST00000300590 BECN1Q14457 450 aa14.17□□□□□ -0.14
SNX20-201ENST00000300590 BCAR3O75815 825 aa14.17□□□□□ -0.14
SNX20-201ENST00000300590 IGHDP01880 384 aa14.16□□□□□ -0.14
SNX20-201ENST00000300590 HSP90AA1P07900 732 aaKnown RBP14.15□□□□□ -0.14
SNX20-201ENST00000300590 DUSP27Q5VZP5 1158 aa14.15□□□□□ -0.14
SNX20-201ENST00000300590 NUP155O75694 1391 aa14.15□□□□□ -0.14
SNX20-201ENST00000300590 PER1O15534 1290 aaPredicted RBP14.15□□□□□ -0.14
SNX20-201ENST00000300590 XRCC6P12956 609 aaKnown RBP eCLIP14.15□□□□□ -0.14
SNX20-201ENST00000300590 POLR1AO95602 1720 aaPredicted RBP14.15□□□□□ -0.14
SNX20-201ENST00000300590 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
SNX20-201ENST00000300590 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
SNX20-201ENST00000300590 ABCA10Q8WWZ4 1543 aa14.14□□□□□ -0.15
SNX20-201ENST00000300590 GOLGA6L3A6NEY3 463 aa14.14□□□□□ -0.15
SNX20-201ENST00000300590 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
SNX20-201ENST00000300590 PZPP20742 1482 aa14.14□□□□□ -0.15
SNX20-201ENST00000300590 CANXP27824 592 aaKnown RBP14.14□□□□□ -0.15
SNX20-201ENST00000300590 EPRSP07814 1512 aaKnown RBP14.14□□□□□ -0.15
SNX20-201ENST00000300590 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
SNX20-201ENST00000300590 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
SNX20-201ENST00000300590 KDM5CP41229 1560 aa14.13□□□□□ -0.15
SNX20-201ENST00000300590 ROCK1Q13464 1354 aa14.12□□□□□ -0.15
SNX20-201ENST00000300590 USP19O94966 1318 aa14.12□□□□□ -0.15
SNX20-201ENST00000300590 PLEKHH1Q9ULM0 1364 aa14.11□□□□□ -0.15
SNX20-201ENST00000300590 COG6Q9Y2V7 657 aa14.11□□□□□ -0.15
SNX20-201ENST00000300590 THOC2Q8NI27 1593 aaKnown RBP14.1□□□□□ -0.15
SNX20-201ENST00000300590 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
SNX20-201ENST00000300590 A0A0U1RQG5 324 aaPredicted RBP14.1□□□□□ -0.15
SNX20-201ENST00000300590 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
SNX20-201ENST00000300590 PANK1Q8TE04 598 aa14.09□□□□□ -0.15
SNX20-201ENST00000300590 MBD5Q9P267 1494 aa14.09□□□□□ -0.15
SNX20-201ENST00000300590 UPF2Q9HAU5 1272 aaKnown RBP14.08□□□□□ -0.15
SNX20-201ENST00000300590 APAF1O14727 1248 aa14.08□□□□□ -0.16
SNX20-201ENST00000300590 SAMD9Q5K651 1589 aa14.07□□□□□ -0.16
SNX20-201ENST00000300590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.16
SNX20-201ENST00000300590 TBC1D2Q9BYX2 928 aa14.07□□□□□ -0.16
SNX20-201ENST00000300590 CUL7Q14999 1698 aa14.06□□□□□ -0.16
SNX20-201ENST00000300590 NESP48681 1621 aa14.06□□□□□ -0.16
SNX20-201ENST00000300590 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
SNX20-201ENST00000300590 RALGAPBQ86X10 1494 aa14.06□□□□□ -0.16
SNX20-201ENST00000300590 KNSTRNQ9Y448 316 aa14.06□□□□□ -0.16
SNX20-201ENST00000300590 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
SNX20-201ENST00000300590 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
SNX20-201ENST00000300590 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
SNX20-201ENST00000300590 SLFN5Q08AF3 891 aa14.04□□□□□ -0.16
SNX20-201ENST00000300590 KIF14Q15058 1648 aa14.04□□□□□ -0.16
SNX20-201ENST00000300590 MCM4P33991 863 aa14.04□□□□□ -0.16
SNX20-201ENST00000300590 CLCN1P35523 988 aa14.04□□□□□ -0.16
SNX20-201ENST00000300590 PPP2R1AP30153 589 aa14.03□□□□□ -0.16
SNX20-201ENST00000300590 MYH16Q9H6N6 1097 aa14.03□□□□□ -0.16
SNX20-201ENST00000300590 ANTXR1Q9H6X2 564 aa14.03□□□□□ -0.16
SNX20-201ENST00000300590 TRAK2O60296 914 aa14.03□□□□□ -0.16
SNX20-201ENST00000300590 ANKRD50Q9ULJ7 1429 aa14.03□□□□□ -0.16
SNX20-201ENST00000300590 CLUAP1Q96AJ1 413 aa14.03□□□□□ -0.16
SNX20-201ENST00000300590 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
SNX20-201ENST00000300590 TMF1P82094 1093 aa14.02□□□□□ -0.16
SNX20-201ENST00000300590 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.16
SNX20-201ENST00000300590 BLMP54132 1417 aaPredicted RBP14.02□□□□□ -0.16
SNX20-201ENST00000300590 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
SNX20-201ENST00000300590 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.17
SNX20-201ENST00000300590 RRP9O43818 475 aaKnown RBP14.02□□□□□ -0.17
SNX20-201ENST00000300590 TSPY4P0CV99 314 aa14.01□□□□□ -0.17
SNX20-201ENST00000300590 TSPY10P0CW01 314 aa14.01□□□□□ -0.17
SNX20-201ENST00000300590 TRIM44Q96DX7 344 aaPredicted RBP14.01□□□□□ -0.17
SNX20-201ENST00000300590 UHRF1BP1Q6BDS2 1440 aa14.01□□□□□ -0.17
SNX20-201ENST00000300590 MFAP1P55081 439 aaKnown RBP14□□□□□ -0.17
SNX20-201ENST00000300590 PRG4Q92954 1404 aaPredicted RBP14□□□□□ -0.17
SNX20-201ENST00000300590 KIAA0586Q9BVV6 1533 aa14□□□□□ -0.17
SNX20-201ENST00000300590 ZMYM4Q5VZL5 1548 aa13.99□□□□□ -0.17
SNX20-201ENST00000300590 ESPNB1AK53 854 aa13.99□□□□□ -0.17
SNX20-201ENST00000300590 TESK2Q96S53 571 aa13.99□□□□□ -0.17
SNX20-201ENST00000300590 TNNQ9UQP3 1299 aa13.99□□□□□ -0.17
SNX20-201ENST00000300590 MAPK8IP3Q9UPT6 1336 aa13.99□□□□□ -0.17
SNX20-201ENST00000300590 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
SNX20-201ENST00000300590 DNMT1P26358 1616 aaKnown RBP13.98□□□□□ -0.17
SNX20-201ENST00000300590 HNRNPMP52272 730 aaKnown RBP eCLIP13.98□□□□□ -0.17
SNX20-201ENST00000300590 ERBB4Q15303 1308 aa13.98□□□□□ -0.17
SNX20-201ENST00000300590 FSD2A1L4K1 749 aa13.97□□□□□ -0.17
SNX20-201ENST00000300590 GRPEL1Q9HAV7 217 aa13.97□□□□□ -0.17
SNX20-201ENST00000300590 PDZRN3Q9UPQ7 1066 aa13.97□□□□□ -0.17
SNX20-201ENST00000300590 TBC1D32Q96NH3 1257 aa13.97□□□□□ -0.17
SNX20-201ENST00000300590 ARID3AQ99856 593 aa13.97□□□□□ -0.17
SNX20-201ENST00000300590 RRP7AQ9Y3A4 280 aaKnown RBP13.97□□□□□ -0.17
SNX20-201ENST00000300590 MRE11P49959 708 aa13.97□□□□□ -0.17
SNX20-201ENST00000300590 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.17
SNX20-201ENST00000300590 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
SNX20-201ENST00000300590 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.18
SNX20-201ENST00000300590 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.18
SNX20-201ENST00000300590 CGNL1Q0VF96 1302 aa13.96□□□□□ -0.18
SNX20-201ENST00000300590 CAMSAP2Q08AD1 1489 aa13.95□□□□□ -0.18
SNX20-201ENST00000300590 ZNF521Q96K83 1311 aa13.95□□□□□ -0.18
SNX20-201ENST00000300590 CHMP5Q9NZZ3 219 aa13.94□□□□□ -0.18
SNX20-201ENST00000300590 TNNT2P45379 298 aaPredicted RBP13.94□□□□□ -0.18
SNX20-201ENST00000300590 EIF3AQ14152 1382 aaKnown RBP13.94□□□□□ -0.18
SNX20-201ENST00000300590 E9PSI1 815 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms