RNA–Protein interactions for RNA: ENST00000298274.12

PCDH11X-201, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-201ENST00000298274 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
PCDH11X-201ENST00000298274 MYO5CQ9NQX4 1742 aa16.17■□□□□ 0.18
PCDH11X-201ENST00000298274 NAIPQ13075 1403 aa16.17■□□□□ 0.18
PCDH11X-201ENST00000298274 ANKRD30BQ9BXX2 1392 aa16.17■□□□□ 0.18
PCDH11X-201ENST00000298274 SYCP2Q9BX26 1530 aa16.16■□□□□ 0.18
PCDH11X-201ENST00000298274 ARHGEF5Q12774 1597 aa16.16■□□□□ 0.18
PCDH11X-201ENST00000298274 HDGFL2Q7Z4V5 671 aaPredicted RBP16.15■□□□□ 0.18
PCDH11X-201ENST00000298274 TMC1Q8TDI8 760 aa16.14■□□□□ 0.17
PCDH11X-201ENST00000298274 MAGI3Q5TCQ9 1506 aa16.12■□□□□ 0.17
PCDH11X-201ENST00000298274 ATP10AO60312 1499 aa16.12■□□□□ 0.17
PCDH11X-201ENST00000298274 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
PCDH11X-201ENST00000298274 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
PCDH11X-201ENST00000298274 DNMT1P26358 1616 aaKnown RBP16.11■□□□□ 0.17
PCDH11X-201ENST00000298274 L3MBTL2Q969R5 705 aa16.11■□□□□ 0.17
PCDH11X-201ENST00000298274 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
PCDH11X-201ENST00000298274 CNGB1Q14028 1251 aaPredicted RBP16.1■□□□□ 0.17
PCDH11X-201ENST00000298274 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCDH11X-201ENST00000298274 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
PCDH11X-201ENST00000298274 SRPK2P78362 688 aaKnown RBP16.09■□□□□ 0.17
PCDH11X-201ENST00000298274 TERF2IPQ9NYB0 399 aa16.09■□□□□ 0.17
PCDH11X-201ENST00000298274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.08■□□□□ 0.17
PCDH11X-201ENST00000298274 FOXD1Q16676 465 aa16.08■□□□□ 0.16
PCDH11X-201ENST00000298274 ATP7AQ04656 1500 aa16.08■□□□□ 0.16
PCDH11X-201ENST00000298274 ZFYVE16Q7Z3T8 1539 aa16.07■□□□□ 0.16
PCDH11X-201ENST00000298274 ANKLE2Q86XL3 938 aa16.07■□□□□ 0.16
PCDH11X-201ENST00000298274 NUDCQ9Y266 331 aa16.07■□□□□ 0.16
PCDH11X-201ENST00000298274 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
PCDH11X-201ENST00000298274 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
PCDH11X-201ENST00000298274 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
PCDH11X-201ENST00000298274 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
PCDH11X-201ENST00000298274 EVC2Q86UK5 1308 aa16.05■□□□□ 0.16
PCDH11X-201ENST00000298274 PREX2Q70Z35 1606 aa16.05■□□□□ 0.16
PCDH11X-201ENST00000298274 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
PCDH11X-201ENST00000298274 YTHDC1Q96MU7 727 aaKnown RBP16.04■□□□□ 0.16
PCDH11X-201ENST00000298274 TRAPPC8Q9Y2L5 1435 aa16.04■□□□□ 0.16
PCDH11X-201ENST00000298274 MLH3Q9UHC1 1453 aa16.02■□□□□ 0.15
PCDH11X-201ENST00000298274 STK26Q9P289 416 aa16■□□□□ 0.15
PCDH11X-201ENST00000298274 FAM135AQ9P2D6 1515 aa16■□□□□ 0.15
PCDH11X-201ENST00000298274 ADGBQ8N7X0 1667 aa16■□□□□ 0.15
PCDH11X-201ENST00000298274 TNRQ92752 1358 aa16■□□□□ 0.15
PCDH11X-201ENST00000298274 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
PCDH11X-201ENST00000298274 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
PCDH11X-201ENST00000298274 ABCC1P33527 1531 aa15.99■□□□□ 0.15
PCDH11X-201ENST00000298274 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
PCDH11X-201ENST00000298274 GLI2P10070 1586 aa15.98■□□□□ 0.15
PCDH11X-201ENST00000298274 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
PCDH11X-201ENST00000298274 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
PCDH11X-201ENST00000298274 CENPJQ9HC77 1338 aaPredicted RBP15.95■□□□□ 0.14
PCDH11X-201ENST00000298274 RALBP1Q15311 655 aa15.95■□□□□ 0.14
PCDH11X-201ENST00000298274 KTN1Q86UP2 1357 aaKnown RBP15.95■□□□□ 0.14
PCDH11X-201ENST00000298274 HECW2Q9P2P5 1572 aa15.94■□□□□ 0.14
PCDH11X-201ENST00000298274 RPRD2Q5VT52 1461 aaKnown RBP15.93■□□□□ 0.14
PCDH11X-201ENST00000298274 MRS2Q9HD23 443 aa15.92■□□□□ 0.14
PCDH11X-201ENST00000298274 USP47Q96K76 1375 aa15.92■□□□□ 0.14
PCDH11X-201ENST00000298274 MAST1Q9Y2H9 1570 aa15.92■□□□□ 0.14
PCDH11X-201ENST00000298274 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
PCDH11X-201ENST00000298274 ATF3P18847 181 aa15.91■□□□□ 0.14
PCDH11X-201ENST00000298274 MORC1Q86VD1 984 aa15.9■□□□□ 0.14
PCDH11X-201ENST00000298274 NGDNQ8NEJ9 315 aaKnown RBP15.9■□□□□ 0.14
PCDH11X-201ENST00000298274 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
PCDH11X-201ENST00000298274 SAMD9LQ8IVG5 1584 aa15.89■□□□□ 0.13
PCDH11X-201ENST00000298274 CHMP4AQ9BY43 222 aa15.89■□□□□ 0.13
PCDH11X-201ENST00000298274 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
PCDH11X-201ENST00000298274 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
PCDH11X-201ENST00000298274 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
PCDH11X-201ENST00000298274 MBD5Q9P267 1494 aa15.88■□□□□ 0.13
PCDH11X-201ENST00000298274 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
PCDH11X-201ENST00000298274 MAPK8IP3Q9UPT6 1336 aa15.88■□□□□ 0.13
PCDH11X-201ENST00000298274 LMOD2Q6P5Q4 547 aa15.87■□□□□ 0.13
PCDH11X-201ENST00000298274 PLXNC1O60486 1568 aa15.86■□□□□ 0.13
PCDH11X-201ENST00000298274 KDM6BO15054 1643 aa15.86■□□□□ 0.13
PCDH11X-201ENST00000298274 GCC2Q8IWJ2 1684 aa15.86■□□□□ 0.13
PCDH11X-201ENST00000298274 CCER2I3L3R5 266 aa15.85■□□□□ 0.13
PCDH11X-201ENST00000298274 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
PCDH11X-201ENST00000298274 SAFB2Q14151 953 aaKnown RBP eCLIP15.84■□□□□ 0.13
PCDH11X-201ENST00000298274 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
PCDH11X-201ENST00000298274 PSME1Q06323 249 aa15.83■□□□□ 0.13
PCDH11X-201ENST00000298274 NPM2Q86SE8 214 aaKnown RBP15.83■□□□□ 0.12
PCDH11X-201ENST00000298274 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
PCDH11X-201ENST00000298274 NUTM2DQ5VT03 806 aaPredicted RBP15.82■□□□□ 0.12
PCDH11X-201ENST00000298274 UHRF1BP1Q6BDS2 1440 aa15.82■□□□□ 0.12
PCDH11X-201ENST00000298274 EIF2AK4Q9P2K8 1649 aaKnown RBP15.82■□□□□ 0.12
PCDH11X-201ENST00000298274 PROSER2Q86WR7 435 aaPredicted RBP15.82■□□□□ 0.12
PCDH11X-201ENST00000298274 ATAD2Q6PL18 1390 aa15.82■□□□□ 0.12
PCDH11X-201ENST00000298274 CALD1Q05682 793 aaKnown RBP15.82■□□□□ 0.12
PCDH11X-201ENST00000298274 GPRASP1Q5JY77 1395 aa15.81■□□□□ 0.12
PCDH11X-201ENST00000298274 ZBTB7CA1YPR0 619 aa15.8■□□□□ 0.12
PCDH11X-201ENST00000298274 ST20-MTHFSA0A0A6YYL1 179 aa15.8■□□□□ 0.12
PCDH11X-201ENST00000298274 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
PCDH11X-201ENST00000298274 CDC42BPAQ5VT25 1732 aa15.79■□□□□ 0.12
PCDH11X-201ENST00000298274 ARHGEF12Q9NZN5 1544 aa15.79■□□□□ 0.12
PCDH11X-201ENST00000298274 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
PCDH11X-201ENST00000298274 WASHC2AQ641Q2 1341 aa15.79■□□□□ 0.12
PCDH11X-201ENST00000298274 IDI1Q13907 227 aa15.78■□□□□ 0.12
PCDH11X-201ENST00000298274 PAK3O75914 559 aaPredicted RBP15.78■□□□□ 0.12
PCDH11X-201ENST00000298274 COG3Q96JB2 828 aa15.77■□□□□ 0.12
PCDH11X-201ENST00000298274 NINLQ9Y2I6 1382 aa15.77■□□□□ 0.11
PCDH11X-201ENST00000298274 FAM9BQ8IZU0 186 aa15.77■□□□□ 0.11
PCDH11X-201ENST00000298274 HIRIP3Q9BW71 556 aaPredicted RBP15.76■□□□□ 0.11
PCDH11X-201ENST00000298274 MINK1Q8N4C8 1332 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms