RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 KDM2AQ9Y2K7 1162 aa19.64■□□□□ 0.73
SPIDR-201ENST00000297423 GSE1Q14687 1217 aa19.63■□□□□ 0.73
SPIDR-201ENST00000297423 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
SPIDR-201ENST00000297423 KIF15Q9NS87 1388 aa19.62■□□□□ 0.73
SPIDR-201ENST00000297423 NUP155O75694 1391 aa19.61■□□□□ 0.73
SPIDR-201ENST00000297423 KDM5BQ9UGL1 1544 aa19.61■□□□□ 0.73
SPIDR-201ENST00000297423 FRAT1Q92837 279 aaPredicted RBP19.6■□□□□ 0.73
SPIDR-201ENST00000297423 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
SPIDR-201ENST00000297423 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
SPIDR-201ENST00000297423 PKD2Q13563 968 aa19.59■□□□□ 0.73
SPIDR-201ENST00000297423 PLEKHH2Q8IVE3 1493 aa19.59■□□□□ 0.73
SPIDR-201ENST00000297423 CCDC141Q6ZP82 1450 aa19.59■□□□□ 0.73
SPIDR-201ENST00000297423 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.72
SPIDR-201ENST00000297423 NFKBIBQ15653 356 aa19.57■□□□□ 0.72
SPIDR-201ENST00000297423 CDC42BPAQ5VT25 1732 aa19.57■□□□□ 0.72
SPIDR-201ENST00000297423 DDRGK1Q96HY6 314 aa19.57■□□□□ 0.72
SPIDR-201ENST00000297423 ZCCHC11Q5TAX3 1644 aaKnown RBP19.57■□□□□ 0.72
SPIDR-201ENST00000297423 GCC2Q8IWJ2 1684 aa19.56■□□□□ 0.72
SPIDR-201ENST00000297423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.56■□□□□ 0.72
SPIDR-201ENST00000297423 RCAN3Q9UKA8 241 aa19.56■□□□□ 0.72
SPIDR-201ENST00000297423 PLCH2O75038 1416 aa19.56■□□□□ 0.72
SPIDR-201ENST00000297423 SPAG9O60271 1321 aaKnown RBP19.55■□□□□ 0.72
SPIDR-201ENST00000297423 WDR7Q9Y4E6 1490 aa19.54■□□□□ 0.72
SPIDR-201ENST00000297423 NAP1L5Q96NT1 182 aaPredicted RBP19.53■□□□□ 0.72
SPIDR-201ENST00000297423 TTC37Q6PGP7 1564 aa19.52■□□□□ 0.72
SPIDR-201ENST00000297423 ASXL2Q76L83 1435 aa19.52■□□□□ 0.72
SPIDR-201ENST00000297423 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
SPIDR-201ENST00000297423 USP35Q9P2H5 1018 aa19.52■□□□□ 0.72
SPIDR-201ENST00000297423 ADGRL2O95490 1459 aa19.51■□□□□ 0.71
SPIDR-201ENST00000297423 SYCP2Q9BX26 1530 aa19.51■□□□□ 0.71
SPIDR-201ENST00000297423 SHANK2Q9UPX8 1470 aa19.51■□□□□ 0.71
SPIDR-201ENST00000297423 KDM6BO15054 1643 aa19.51■□□□□ 0.71
SPIDR-201ENST00000297423 CCDC7Q96M83 1385 aa19.51■□□□□ 0.71
SPIDR-201ENST00000297423 AFAP1Q8N556 730 aa19.51■□□□□ 0.71
SPIDR-201ENST00000297423 CNTLNQ9NXG0 1405 aa19.5■□□□□ 0.71
SPIDR-201ENST00000297423 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
SPIDR-201ENST00000297423 RRP1P56182 461 aaKnown RBP19.5■□□□□ 0.71
SPIDR-201ENST00000297423 SLKQ9H2G2 1235 aaPredicted RBP19.49■□□□□ 0.71
SPIDR-201ENST00000297423 KIAA1107Q9UPP5 1409 aa19.48■□□□□ 0.71
SPIDR-201ENST00000297423 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
SPIDR-201ENST00000297423 FRAT2O75474 233 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-201ENST00000297423 SPRYD3Q8NCJ5 442 aa19.48■□□□□ 0.71
SPIDR-201ENST00000297423 SAMD9LQ8IVG5 1584 aa19.48■□□□□ 0.71
SPIDR-201ENST00000297423 MYO5CQ9NQX4 1742 aa19.47■□□□□ 0.71
SPIDR-201ENST00000297423 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
SPIDR-201ENST00000297423 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
SPIDR-201ENST00000297423 UBE2Q2Q8WVN8 375 aa19.46■□□□□ 0.71
SPIDR-201ENST00000297423 BACH2Q9BYV9 841 aa19.46■□□□□ 0.71
SPIDR-201ENST00000297423 ARHGEF5Q12774 1597 aa19.45■□□□□ 0.7
SPIDR-201ENST00000297423 CDCA7LQ96GN5 454 aa19.45■□□□□ 0.7
SPIDR-201ENST00000297423 VSIG10Q8N0Z9 540 aa19.45■□□□□ 0.7
SPIDR-201ENST00000297423 GLIPR1L2Q4G1C9 344 aa19.44■□□□□ 0.7
SPIDR-201ENST00000297423 GZF1Q9H116 711 aaPredicted RBP19.44■□□□□ 0.7
SPIDR-201ENST00000297423 CDC42BPBQ9Y5S2 1711 aa19.44■□□□□ 0.7
SPIDR-201ENST00000297423 CC2D1BQ5T0F9 858 aaKnown RBP19.44■□□□□ 0.7
SPIDR-201ENST00000297423 CRBNQ96SW2 442 aa19.43■□□□□ 0.7
SPIDR-201ENST00000297423 ANKRD30BQ9BXX2 1392 aa19.43■□□□□ 0.7
SPIDR-201ENST00000297423 FANCAO15360 1455 aa19.43■□□□□ 0.7
SPIDR-201ENST00000297423 SCAPERQ9BY12 1400 aa19.41■□□□□ 0.7
SPIDR-201ENST00000297423 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
SPIDR-201ENST00000297423 TRAPPC8Q9Y2L5 1435 aa19.39■□□□□ 0.7
SPIDR-201ENST00000297423 CROCC2H7BZ55 1655 aa19.39■□□□□ 0.69
SPIDR-201ENST00000297423 CD109Q6YHK3 1445 aa19.39■□□□□ 0.69
SPIDR-201ENST00000297423 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
SPIDR-201ENST00000297423 KIF3BO15066 747 aa19.37■□□□□ 0.69
SPIDR-201ENST00000297423 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
SPIDR-201ENST00000297423 PZPP20742 1482 aa19.37■□□□□ 0.69
SPIDR-201ENST00000297423 RGL3Q3MIN7 710 aa19.35■□□□□ 0.69
SPIDR-201ENST00000297423 SMG6Q86US8 1419 aaKnown RBP19.35■□□□□ 0.69
SPIDR-201ENST00000297423 KANK1Q14678 1352 aa19.34■□□□□ 0.69
SPIDR-201ENST00000297423 PKNOX2Q96KN3 472 aa19.34■□□□□ 0.69
SPIDR-201ENST00000297423 ARHGEF12Q9NZN5 1544 aa19.33■□□□□ 0.68
SPIDR-201ENST00000297423 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.68
SPIDR-201ENST00000297423 RPRD2Q5VT52 1461 aaKnown RBP19.32■□□□□ 0.68
SPIDR-201ENST00000297423 PNISRQ8TF01 805 aaKnown RBP19.32■□□□□ 0.68
SPIDR-201ENST00000297423 FAM69CQ0P6D2 419 aa19.32■□□□□ 0.68
SPIDR-201ENST00000297423 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
SPIDR-201ENST00000297423 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
SPIDR-201ENST00000297423 ABCC1P33527 1531 aa19.31■□□□□ 0.68
SPIDR-201ENST00000297423 DUOX2Q9NRD8 1548 aa19.3■□□□□ 0.68
SPIDR-201ENST00000297423 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
SPIDR-201ENST00000297423 ARAP3Q8WWN8 1544 aa19.28■□□□□ 0.68
SPIDR-201ENST00000297423 MS4A1P11836 297 aa19.28■□□□□ 0.68
SPIDR-201ENST00000297423 RTEL1-TNFRSF6BF6WH68 1400 aa19.26■□□□□ 0.67
SPIDR-201ENST00000297423 ERBINQ96RT1 1412 aa19.26■□□□□ 0.67
SPIDR-201ENST00000297423 C20orf194Q5TEA3 1177 aa19.26■□□□□ 0.67
SPIDR-201ENST00000297423 POGKQ9P215 609 aa19.26■□□□□ 0.67
SPIDR-201ENST00000297423 GGT6Q6P531 493 aa19.26■□□□□ 0.67
SPIDR-201ENST00000297423 ST20-MTHFSA0A0A6YYL1 179 aa19.25■□□□□ 0.67
SPIDR-201ENST00000297423 PNNQ9H307 717 aaKnown RBP19.25■□□□□ 0.67
SPIDR-201ENST00000297423 MAST1Q9Y2H9 1570 aa19.25■□□□□ 0.67
SPIDR-201ENST00000297423 ABCA9Q8IUA7 1624 aa19.25■□□□□ 0.67
SPIDR-201ENST00000297423 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
SPIDR-201ENST00000297423 FAM135AQ9P2D6 1515 aa19.24■□□□□ 0.67
SPIDR-201ENST00000297423 RAPGEF3O95398 923 aa19.24■□□□□ 0.67
SPIDR-201ENST00000297423 ARID3AQ99856 593 aa19.24■□□□□ 0.67
SPIDR-201ENST00000297423 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
SPIDR-201ENST00000297423 FAM161AQ3B820 660 aa19.21■□□□□ 0.67
SPIDR-201ENST00000297423 USP47Q96K76 1375 aa19.21■□□□□ 0.67
SPIDR-201ENST00000297423 HSP90AA2PQ14568 343 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms