RNA–Protein interactions for RNA: ENST00000295872.8

SPICE1-201, Transcript of spindle and centriole associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPICE1, Length 5,417 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPICE1-201ENST00000295872 RAPGEF3O95398 923 aa16.94■□□□□ 0.3
SPICE1-201ENST00000295872 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
SPICE1-201ENST00000295872 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
SPICE1-201ENST00000295872 EVC2Q86UK5 1308 aa16.93■□□□□ 0.3
SPICE1-201ENST00000295872 RCAN3Q9UKA8 241 aa16.93■□□□□ 0.3
SPICE1-201ENST00000295872 MINK1Q8N4C8 1332 aaPredicted RBP16.93■□□□□ 0.3
SPICE1-201ENST00000295872 SCAPERQ9BY12 1400 aa16.93■□□□□ 0.3
SPICE1-201ENST00000295872 USP47Q96K76 1375 aa16.92■□□□□ 0.3
SPICE1-201ENST00000295872 GOLGA6L22H0YM25 854 aa16.92■□□□□ 0.3
SPICE1-201ENST00000295872 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
SPICE1-201ENST00000295872 PDE3BQ13370 1112 aa16.91■□□□□ 0.3
SPICE1-201ENST00000295872 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
SPICE1-201ENST00000295872 MYBBP1AQ9BQG0 1328 aaKnown RBP16.9■□□□□ 0.3
SPICE1-201ENST00000295872 IPO8O15397 1037 aaKnown RBP16.9■□□□□ 0.3
SPICE1-201ENST00000295872 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
SPICE1-201ENST00000295872 EHBP1L1Q8N3D4 1523 aa16.9■□□□□ 0.3
SPICE1-201ENST00000295872 POGZQ7Z3K3 1410 aa16.89■□□□□ 0.29
SPICE1-201ENST00000295872 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
SPICE1-201ENST00000295872 ATF3P18847 181 aa16.89■□□□□ 0.29
SPICE1-201ENST00000295872 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
SPICE1-201ENST00000295872 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
SPICE1-201ENST00000295872 OS9Q13438 667 aaPredicted RBP16.88■□□□□ 0.29
SPICE1-201ENST00000295872 TXNDC2Q86VQ3 553 aa16.86■□□□□ 0.29
SPICE1-201ENST00000295872 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
SPICE1-201ENST00000295872 COG3Q96JB2 828 aa16.86■□□□□ 0.29
SPICE1-201ENST00000295872 CUL7Q14999 1698 aa16.85■□□□□ 0.29
SPICE1-201ENST00000295872 THEMISQ8N1K5 641 aaPredicted RBP16.85■□□□□ 0.29
SPICE1-201ENST00000295872 PSME1Q06323 249 aa16.85■□□□□ 0.29
SPICE1-201ENST00000295872 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
SPICE1-201ENST00000295872 PRKRIP1Q9H875 184 aaPredicted RBP16.85■□□□□ 0.29
SPICE1-201ENST00000295872 EVA1CP58658 441 aa16.85■□□□□ 0.29
SPICE1-201ENST00000295872 PANK3Q9H999 370 aa16.85■□□□□ 0.29
SPICE1-201ENST00000295872 MIA2Q96PC5 1412 aa16.85■□□□□ 0.29
SPICE1-201ENST00000295872 CD109Q6YHK3 1445 aa16.84■□□□□ 0.29
SPICE1-201ENST00000295872 CHMP4AQ9BY43 222 aa16.84■□□□□ 0.29
SPICE1-201ENST00000295872 TIAM1Q13009 1591 aa16.83■□□□□ 0.29
SPICE1-201ENST00000295872 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
SPICE1-201ENST00000295872 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
SPICE1-201ENST00000295872 NOP58Q9Y2X3 529 aaKnown RBP16.82■□□□□ 0.28
SPICE1-201ENST00000295872 MEX3CQ5U5Q3 659 aaKnown RBP16.81■□□□□ 0.28
SPICE1-201ENST00000295872 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
SPICE1-201ENST00000295872 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
SPICE1-201ENST00000295872 EPRSP07814 1512 aaKnown RBP16.79■□□□□ 0.28
SPICE1-201ENST00000295872 PLB1Q6P1J6 1458 aa16.78■□□□□ 0.28
SPICE1-201ENST00000295872 PROSER2Q86WR7 435 aaPredicted RBP16.78■□□□□ 0.28
SPICE1-201ENST00000295872 RWDD1Q9H446 243 aaPredicted RBP16.78■□□□□ 0.28
SPICE1-201ENST00000295872 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
SPICE1-201ENST00000295872 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.28
SPICE1-201ENST00000295872 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.27
SPICE1-201ENST00000295872 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
SPICE1-201ENST00000295872 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
SPICE1-201ENST00000295872 CCDC7Q96M83 1385 aa16.75■□□□□ 0.27
SPICE1-201ENST00000295872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.75■□□□□ 0.27
SPICE1-201ENST00000295872 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
SPICE1-201ENST00000295872 ANKLE2Q86XL3 938 aa16.75■□□□□ 0.27
SPICE1-201ENST00000295872 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
SPICE1-201ENST00000295872 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
SPICE1-201ENST00000295872 ZBED9Q6R2W3 1325 aa16.74■□□□□ 0.27
SPICE1-201ENST00000295872 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
SPICE1-201ENST00000295872 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
SPICE1-201ENST00000295872 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
SPICE1-201ENST00000295872 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
SPICE1-201ENST00000295872 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
SPICE1-201ENST00000295872 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
SPICE1-201ENST00000295872 TMX4Q9H1E5 349 aaPredicted RBP16.72■□□□□ 0.27
SPICE1-201ENST00000295872 HSCBQ8IWL3 235 aa16.71■□□□□ 0.27
SPICE1-201ENST00000295872 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.27
SPICE1-201ENST00000295872 C1orf141Q5JVX7 400 aa16.71■□□□□ 0.27
SPICE1-201ENST00000295872 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
SPICE1-201ENST00000295872 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
SPICE1-201ENST00000295872 MCCP23508 829 aa16.7■□□□□ 0.26
SPICE1-201ENST00000295872 NGEFQ8N5V2 710 aa16.69■□□□□ 0.26
SPICE1-201ENST00000295872 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
SPICE1-201ENST00000295872 KCNJ4P48050 445 aa16.69■□□□□ 0.26
SPICE1-201ENST00000295872 CFAP70Q5T0N1 1121 aa16.69■□□□□ 0.26
SPICE1-201ENST00000295872 TRIM44Q96DX7 344 aaPredicted RBP16.69■□□□□ 0.26
SPICE1-201ENST00000295872 KIAA1107Q9UPP5 1409 aa16.67■□□□□ 0.26
SPICE1-201ENST00000295872 E9PSI1 815 aa16.67■□□□□ 0.26
SPICE1-201ENST00000295872 DAPK1P53355 1430 aa16.67■□□□□ 0.26
SPICE1-201ENST00000295872 GPRASP1Q5JY77 1395 aa16.66■□□□□ 0.26
SPICE1-201ENST00000295872 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
SPICE1-201ENST00000295872 ESCO1Q5FWF5 840 aa16.66■□□□□ 0.26
SPICE1-201ENST00000295872 MAP3K1Q13233 1512 aa16.66■□□□□ 0.26
SPICE1-201ENST00000295872 CCDC141Q6ZP82 1450 aa16.65■□□□□ 0.26
SPICE1-201ENST00000295872 CABP2Q9NPB3 220 aa16.65■□□□□ 0.26
SPICE1-201ENST00000295872 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
SPICE1-201ENST00000295872 TEFQ10587 303 aa16.64■□□□□ 0.26
SPICE1-201ENST00000295872 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.25
SPICE1-201ENST00000295872 SLC26A8Q96RN1 970 aa16.64■□□□□ 0.25
SPICE1-201ENST00000295872 PCF11O94913 1555 aaKnown RBP16.64■□□□□ 0.25
SPICE1-201ENST00000295872 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
SPICE1-201ENST00000295872 FGD1P98174 961 aa16.64■□□□□ 0.25
SPICE1-201ENST00000295872 KIF14Q15058 1648 aa16.63■□□□□ 0.25
SPICE1-201ENST00000295872 NLRP6P59044 892 aa16.63■□□□□ 0.25
SPICE1-201ENST00000295872 HMMRO75330 724 aa16.63■□□□□ 0.25
SPICE1-201ENST00000295872 DENND4BO75064 1496 aaPredicted RBP16.62■□□□□ 0.25
SPICE1-201ENST00000295872 ROCK1Q13464 1354 aa16.62■□□□□ 0.25
SPICE1-201ENST00000295872 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
SPICE1-201ENST00000295872 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
SPICE1-201ENST00000295872 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms