RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SKIDA1Q1XH10 827 aa15.45■□□□□ 0.06
SLX4-201ENST00000294008 MCTP1Q6DN14 999 aa15.45■□□□□ 0.06
SLX4-201ENST00000294008 BCL11BQ9C0K0 894 aaPredicted RBP15.45■□□□□ 0.06
SLX4-201ENST00000294008 SPAG9O60271 1321 aaKnown RBP15.44■□□□□ 0.06
SLX4-201ENST00000294008 FYB1O15117 783 aa15.44■□□□□ 0.06
SLX4-201ENST00000294008 CCDC70Q6NSX1 233 aa15.43■□□□□ 0.06
SLX4-201ENST00000294008 NUTM2DQ5VT03 806 aaPredicted RBP15.43■□□□□ 0.06
SLX4-201ENST00000294008 APPP05067 770 aa15.43■□□□□ 0.06
SLX4-201ENST00000294008 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
SLX4-201ENST00000294008 HSP90AB2PQ58FF8 381 aa15.42■□□□□ 0.06
SLX4-201ENST00000294008 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
SLX4-201ENST00000294008 NGDNQ8NEJ9 315 aaKnown RBP15.42■□□□□ 0.06
SLX4-201ENST00000294008 TPM1P09493 284 aa15.41■□□□□ 0.06
SLX4-201ENST00000294008 WWC2Q6AWC2 1192 aa15.41■□□□□ 0.06
SLX4-201ENST00000294008 FAM184AQ8NB25 1140 aa15.41■□□□□ 0.06
SLX4-201ENST00000294008 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
SLX4-201ENST00000294008 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.06
SLX4-201ENST00000294008 SYNE3Q6ZMZ3 975 aa15.41■□□□□ 0.06
SLX4-201ENST00000294008 FOSBP53539 338 aa15.4■□□□□ 0.06
SLX4-201ENST00000294008 IKQ13123 557 aaPredicted RBP15.4■□□□□ 0.06
SLX4-201ENST00000294008 KDM4AO75164 1064 aa15.4■□□□□ 0.06
SLX4-201ENST00000294008 AMPHP49418 695 aa15.4■□□□□ 0.06
SLX4-201ENST00000294008 DCAF11Q8TEB1 546 aa15.39■□□□□ 0.05
SLX4-201ENST00000294008 IPO8O15397 1037 aaKnown RBP15.39■□□□□ 0.05
SLX4-201ENST00000294008 TMF1P82094 1093 aa15.39■□□□□ 0.05
SLX4-201ENST00000294008 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
SLX4-201ENST00000294008 CSPP1Q1MSJ5 1256 aa15.38■□□□□ 0.05
SLX4-201ENST00000294008 RILPL2Q969X0 211 aa15.38■□□□□ 0.05
SLX4-201ENST00000294008 PLCD4Q9BRC7 762 aa15.38■□□□□ 0.05
SLX4-201ENST00000294008 DHX37Q8IY37 1157 aaKnown RBP15.37■□□□□ 0.05
SLX4-201ENST00000294008 KANK1Q14678 1352 aa15.36■□□□□ 0.05
SLX4-201ENST00000294008 RBM33Q96EV2 1170 aaKnown RBP15.35■□□□□ 0.05
SLX4-201ENST00000294008 GOLGA6L19H0YKK7 550 aa15.35■□□□□ 0.05
SLX4-201ENST00000294008 CALD1Q05682 793 aaKnown RBP15.34■□□□□ 0.05
SLX4-201ENST00000294008 TRIM29Q14134 588 aa15.34■□□□□ 0.05
SLX4-201ENST00000294008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.34■□□□□ 0.05
SLX4-201ENST00000294008 CCDC47Q96A33 483 aaKnown RBP15.34■□□□□ 0.05
SLX4-201ENST00000294008 EPS15P42566 896 aa15.33■□□□□ 0.05
SLX4-201ENST00000294008 IPO7O95373 1038 aaKnown RBP15.33■□□□□ 0.04
SLX4-201ENST00000294008 HOMER1Q86YM7 354 aa15.33■□□□□ 0.04
SLX4-201ENST00000294008 BECN2A8MW95 431 aa15.33■□□□□ 0.04
SLX4-201ENST00000294008 ANKRD62A6NC57 917 aa15.32■□□□□ 0.04
SLX4-201ENST00000294008 NFXL1Q6ZNB6 911 aa15.32■□□□□ 0.04
SLX4-201ENST00000294008 MAP7D2Q96T17 732 aa15.32■□□□□ 0.04
SLX4-201ENST00000294008 CCDC27Q2M243 656 aa15.31■□□□□ 0.04
SLX4-201ENST00000294008 SPDYE4A6NLX3 237 aa15.31■□□□□ 0.04
SLX4-201ENST00000294008 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
SLX4-201ENST00000294008 CLUAP1Q96AJ1 413 aa15.3■□□□□ 0.04
SLX4-201ENST00000294008 NECTIN2Q92692 538 aa15.3■□□□□ 0.04
SLX4-201ENST00000294008 RUFY1Q96T51 708 aa15.3■□□□□ 0.04
SLX4-201ENST00000294008 DEKP35659 375 aaKnown RBP15.3■□□□□ 0.04
SLX4-201ENST00000294008 KIF3AQ9Y496 699 aa15.29■□□□□ 0.04
SLX4-201ENST00000294008 PLCD3Q8N3E9 789 aa15.29■□□□□ 0.04
SLX4-201ENST00000294008 GPS2Q13227 327 aa15.29■□□□□ 0.04
SLX4-201ENST00000294008 C1orf141Q5JVX7 400 aa15.29■□□□□ 0.04
SLX4-201ENST00000294008 ZNF771Q7L3S4 317 aaPredicted RBP15.29■□□□□ 0.04
SLX4-201ENST00000294008 EID1Q9Y6B2 187 aa15.29■□□□□ 0.04
SLX4-201ENST00000294008 HMMRO75330 724 aa15.29■□□□□ 0.04
SLX4-201ENST00000294008 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
SLX4-201ENST00000294008 NEFHP12036 1026 aa15.27■□□□□ 0.04
SLX4-201ENST00000294008 EIF2S2P20042 333 aaKnown RBP15.27■□□□□ 0.04
SLX4-201ENST00000294008 MYCNP04198 464 aaPredicted RBP15.27■□□□□ 0.03
SLX4-201ENST00000294008 CHMP4BP1P59074 171 aa15.27■□□□□ 0.03
SLX4-201ENST00000294008 PAXIP1Q6ZW49 1069 aaPredicted RBP15.27■□□□□ 0.03
SLX4-201ENST00000294008 ANKRD20A12PQ8NF67 263 aa15.26■□□□□ 0.03
SLX4-201ENST00000294008 RWDD1Q9H446 243 aaPredicted RBP15.26■□□□□ 0.03
SLX4-201ENST00000294008 GOLGA6L3A6NEY3 463 aa15.26■□□□□ 0.03
SLX4-201ENST00000294008 FAM177BA6PVY3 158 aa15.26■□□□□ 0.03
SLX4-201ENST00000294008 CCDC146Q8IYE0 955 aa15.25■□□□□ 0.03
SLX4-201ENST00000294008 TTC5Q8N0Z6 440 aa15.25■□□□□ 0.03
SLX4-201ENST00000294008 PLIN1O60240 522 aa15.24■□□□□ 0.03
SLX4-201ENST00000294008 PHF14O94880 888 aa15.24■□□□□ 0.03
SLX4-201ENST00000294008 ERICH2A1L162 156 aa15.24■□□□□ 0.03
SLX4-201ENST00000294008 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
SLX4-201ENST00000294008 OFD1O75665 1012 aa15.24■□□□□ 0.03
SLX4-201ENST00000294008 HDAC5Q9UQL6 1122 aa15.24■□□□□ 0.03
SLX4-201ENST00000294008 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
SLX4-201ENST00000294008 CPLX1O14810 134 aa15.23■□□□□ 0.03
SLX4-201ENST00000294008 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
SLX4-201ENST00000294008 ATP2B2Q01814 1243 aa15.21■□□□□ 0.03
SLX4-201ENST00000294008 NEBLO76041 1014 aa15.21■□□□□ 0.03
SLX4-201ENST00000294008 ST18O60284 1047 aa15.2■□□□□ 0.02
SLX4-201ENST00000294008 ANO2Q9NQ90 1003 aa15.2■□□□□ 0.02
SLX4-201ENST00000294008 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
SLX4-201ENST00000294008 CPLX2Q6PUV4 134 aaKnown RBP15.19■□□□□ 0.02
SLX4-201ENST00000294008 TCERG1O14776 1098 aaKnown RBP15.19■□□□□ 0.02
SLX4-201ENST00000294008 CDR1P51861 262 aa15.19■□□□□ 0.02
SLX4-201ENST00000294008 CAGE1Q8TC20 777 aa15.18■□□□□ 0.02
SLX4-201ENST00000294008 CHMP4AQ9BY43 222 aa15.18■□□□□ 0.02
SLX4-201ENST00000294008 TRDNQ13061 729 aa15.18■□□□□ 0.02
SLX4-201ENST00000294008 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
SLX4-201ENST00000294008 RDXP35241 583 aaKnown RBP15.17■□□□□ 0.02
SLX4-201ENST00000294008 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
SLX4-201ENST00000294008 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
SLX4-201ENST00000294008 DIAPH3Q9NSV4 1193 aa15.17■□□□□ 0.02
SLX4-201ENST00000294008 ZCCHC6Q5VYS8 1495 aaKnown RBP15.16■□□□□ 0.02
SLX4-201ENST00000294008 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
SLX4-201ENST00000294008 CCDC173Q0VFZ6 552 aa15.16■□□□□ 0.02
SLX4-201ENST00000294008 PDILTQ8N807 584 aa15.16■□□□□ 0.02
SLX4-201ENST00000294008 PSMD1Q99460 953 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms