RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
PCYT1A-201ENST00000292823 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
PCYT1A-201ENST00000292823 GRIN2AQ12879 1464 aa12.69□□□□□ -0.38
PCYT1A-201ENST00000292823 NCLP19338 710 aaKnown RBP12.68□□□□□ -0.38
PCYT1A-201ENST00000292823 URB2Q14146 1524 aaKnown RBP12.68□□□□□ -0.38
PCYT1A-201ENST00000292823 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
PCYT1A-201ENST00000292823 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
PCYT1A-201ENST00000292823 WDR97A6NE52 1622 aa12.68□□□□□ -0.38
PCYT1A-201ENST00000292823 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
PCYT1A-201ENST00000292823 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
PCYT1A-201ENST00000292823 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
PCYT1A-201ENST00000292823 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
PCYT1A-201ENST00000292823 FAM69CQ0P6D2 419 aa12.67□□□□□ -0.38
PCYT1A-201ENST00000292823 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
PCYT1A-201ENST00000292823 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
PCYT1A-201ENST00000292823 PTMSP20962 102 aa12.67□□□□□ -0.38
PCYT1A-201ENST00000292823 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
PCYT1A-201ENST00000292823 NGEFQ8N5V2 710 aa12.66□□□□□ -0.38
PCYT1A-201ENST00000292823 RWDD1Q9H446 243 aaPredicted RBP12.66□□□□□ -0.38
PCYT1A-201ENST00000292823 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
PCYT1A-201ENST00000292823 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
PCYT1A-201ENST00000292823 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
PCYT1A-201ENST00000292823 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.38
PCYT1A-201ENST00000292823 BRD4O60885 1362 aaPredicted RBP12.65□□□□□ -0.38
PCYT1A-201ENST00000292823 CENPQQ7L2Z9 268 aaPredicted RBP12.64□□□□□ -0.39
PCYT1A-201ENST00000292823 ANKRD50Q9ULJ7 1429 aa12.64□□□□□ -0.39
PCYT1A-201ENST00000292823 KIF14Q15058 1648 aa12.64□□□□□ -0.39
PCYT1A-201ENST00000292823 ROCK1Q13464 1354 aa12.63□□□□□ -0.39
PCYT1A-201ENST00000292823 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
PCYT1A-201ENST00000292823 ARXQ96QS3 562 aa12.63□□□□□ -0.39
PCYT1A-201ENST00000292823 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
PCYT1A-201ENST00000292823 LMOD2Q6P5Q4 547 aa12.63□□□□□ -0.39
PCYT1A-201ENST00000292823 TNNT2P45379 298 aaPredicted RBP12.62□□□□□ -0.39
PCYT1A-201ENST00000292823 STK26Q9P289 416 aa12.62□□□□□ -0.39
PCYT1A-201ENST00000292823 PTPN23Q9H3S7 1636 aa12.61□□□□□ -0.39
PCYT1A-201ENST00000292823 THOC2Q8NI27 1593 aaKnown RBP12.61□□□□□ -0.39
PCYT1A-201ENST00000292823 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
PCYT1A-201ENST00000292823 PANK3Q9H999 370 aa12.61□□□□□ -0.39
PCYT1A-201ENST00000292823 DAPK1P53355 1430 aa12.6□□□□□ -0.39
PCYT1A-201ENST00000292823 CENPJQ9HC77 1338 aaPredicted RBP12.6□□□□□ -0.39
PCYT1A-201ENST00000292823 NAIPQ13075 1403 aa12.6□□□□□ -0.39
PCYT1A-201ENST00000292823 EPRSP07814 1512 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-201ENST00000292823 A0A0G2JS52 829 aa12.6□□□□□ -0.39
PCYT1A-201ENST00000292823 E9PSI1 815 aa12.58□□□□□ -0.4
PCYT1A-201ENST00000292823 PDE4AP27815 886 aa12.58□□□□□ -0.4
PCYT1A-201ENST00000292823 RTF1Q92541 710 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-201ENST00000292823 EVC2Q86UK5 1308 aa12.58□□□□□ -0.4
PCYT1A-201ENST00000292823 C9orf84Q5VXU9 1444 aa12.58□□□□□ -0.4
PCYT1A-201ENST00000292823 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
PCYT1A-201ENST00000292823 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
PCYT1A-201ENST00000292823 CTTNBP2Q8WZ74 1663 aa12.56□□□□□ -0.4
PCYT1A-201ENST00000292823 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
PCYT1A-201ENST00000292823 EXOC6Q8TAG9 804 aa12.56□□□□□ -0.4
PCYT1A-201ENST00000292823 CGNL1Q0VF96 1302 aa12.55□□□□□ -0.4
PCYT1A-201ENST00000292823 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
PCYT1A-201ENST00000292823 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCYT1A-201ENST00000292823 ZNF644Q9H582 1327 aaPredicted RBP12.55□□□□□ -0.4
PCYT1A-201ENST00000292823 LMOD3Q0VAK6 560 aa12.54□□□□□ -0.4
PCYT1A-201ENST00000292823 AAMPQ13685 434 aa12.54□□□□□ -0.4
PCYT1A-201ENST00000292823 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCYT1A-201ENST00000292823 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
PCYT1A-201ENST00000292823 CFAP43Q8NDM7 1665 aa12.53□□□□□ -0.4
PCYT1A-201ENST00000292823 AKNAQ7Z591 1439 aa12.53□□□□□ -0.4
PCYT1A-201ENST00000292823 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
PCYT1A-201ENST00000292823 MCCP23508 829 aa12.53□□□□□ -0.4
PCYT1A-201ENST00000292823 CRBNQ96SW2 442 aa12.52□□□□□ -0.4
PCYT1A-201ENST00000292823 CCDC141Q6ZP82 1450 aa12.52□□□□□ -0.41
PCYT1A-201ENST00000292823 SCAPERQ9BY12 1400 aa12.51□□□□□ -0.41
PCYT1A-201ENST00000292823 WDR62O43379 1518 aa12.51□□□□□ -0.41
PCYT1A-201ENST00000292823 ITPRIPQ8IWB1 547 aa12.51□□□□□ -0.41
PCYT1A-201ENST00000292823 ADAMTS12P58397 1594 aa12.51□□□□□ -0.41
PCYT1A-201ENST00000292823 CCDC146Q8IYE0 955 aa12.51□□□□□ -0.41
PCYT1A-201ENST00000292823 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
PCYT1A-201ENST00000292823 KIF21AQ7Z4S6 1674 aa12.5□□□□□ -0.41
PCYT1A-201ENST00000292823 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
PCYT1A-201ENST00000292823 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
PCYT1A-201ENST00000292823 PTMAP06454 111 aaKnown RBP12.5□□□□□ -0.41
PCYT1A-201ENST00000292823 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
PCYT1A-201ENST00000292823 NAP1L5Q96NT1 182 aaPredicted RBP12.49□□□□□ -0.41
PCYT1A-201ENST00000292823 RAPGEF6Q8TEU7 1601 aa12.49□□□□□ -0.41
PCYT1A-201ENST00000292823 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
PCYT1A-201ENST00000292823 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
PCYT1A-201ENST00000292823 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
PCYT1A-201ENST00000292823 CDK13Q14004 1512 aaKnown RBP12.48□□□□□ -0.41
PCYT1A-201ENST00000292823 RPGRIP1LQ68CZ1 1315 aa12.48□□□□□ -0.41
PCYT1A-201ENST00000292823 CAMSAP2Q08AD1 1489 aa12.47□□□□□ -0.41
PCYT1A-201ENST00000292823 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
PCYT1A-201ENST00000292823 CSB-PGBD3P0DP91 1061 aa12.47□□□□□ -0.41
PCYT1A-201ENST00000292823 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
PCYT1A-201ENST00000292823 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
PCYT1A-201ENST00000292823 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
PCYT1A-201ENST00000292823 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.42
PCYT1A-201ENST00000292823 GOLGA6L3A6NEY3 463 aa12.45□□□□□ -0.42
PCYT1A-201ENST00000292823 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
PCYT1A-201ENST00000292823 NCOA1Q15788 1441 aa12.45□□□□□ -0.42
PCYT1A-201ENST00000292823 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
PCYT1A-201ENST00000292823 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
PCYT1A-201ENST00000292823 COG3Q96JB2 828 aa12.44□□□□□ -0.42
PCYT1A-201ENST00000292823 PLIN1O60240 522 aa12.44□□□□□ -0.42
PCYT1A-201ENST00000292823 CD109Q6YHK3 1445 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms