RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.37
KPNB1-201ENST00000290158 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
KPNB1-201ENST00000290158 MPHOSPH9Q99550 1183 aa12.7□□□□□ -0.38
KPNB1-201ENST00000290158 TRAK1Q9UPV9 953 aa12.7□□□□□ -0.38
KPNB1-201ENST00000290158 HSPA5P11021 654 aaKnown RBP12.7□□□□□ -0.38
KPNB1-201ENST00000290158 ZNF771Q7L3S4 317 aaPredicted RBP12.7□□□□□ -0.38
KPNB1-201ENST00000290158 GOLGA6L1Q8N7Z2 621 aa12.7□□□□□ -0.38
KPNB1-201ENST00000290158 CCDC18Q5T9S5 1454 aa12.7□□□□□ -0.38
KPNB1-201ENST00000290158 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
KPNB1-201ENST00000290158 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■■□□□ 12.2
KPNB1-201ENST00000290158 SETQ01105 290 aaPredicted RBP12.69□□□□□ -0.38
KPNB1-201ENST00000290158 NOL8Q76FK4 1167 aaKnown RBP12.69□□□□□ -0.38
KPNB1-201ENST00000290158 MCCP23508 829 aa12.68□□□□□ -0.38
KPNB1-201ENST00000290158 EIF3AQ14152 1382 aaKnown RBP12.68□□□□□ -0.38
KPNB1-201ENST00000290158 GNL2Q13823 731 aaKnown RBP12.67□□□□□ -0.38
KPNB1-201ENST00000290158 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
KPNB1-201ENST00000290158 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
KPNB1-201ENST00000290158 FOXD4L5Q5VV16 416 aaPredicted RBP12.66□□□□□ -0.38
KPNB1-201ENST00000290158 FOXD4L4Q8WXT5 416 aaPredicted RBP12.66□□□□□ -0.38
KPNB1-201ENST00000290158 DDX11L8A8MPP1 907 aa12.66□□□□□ -0.38
KPNB1-201ENST00000290158 HSP90B1P14625 803 aaKnown RBP12.65□□□□□ -0.38
KPNB1-201ENST00000290158 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.38
KPNB1-201ENST00000290158 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
KPNB1-201ENST00000290158 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.39
KPNB1-201ENST00000290158 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.39
KPNB1-201ENST00000290158 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
KPNB1-201ENST00000290158 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
KPNB1-201ENST00000290158 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
KPNB1-201ENST00000290158 RCAN3Q9UKA8 241 aa12.64□□□□□ -0.39
KPNB1-201ENST00000290158 TERF2IPQ9NYB0 399 aa12.64□□□□□ -0.39
KPNB1-201ENST00000290158 NOC3LQ8WTT2 800 aaKnown RBP12.63□□□□□ -0.39
KPNB1-201ENST00000290158 CALRP27797 417 aaKnown RBP12.62□□□□□ -0.39
KPNB1-201ENST00000290158 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
KPNB1-201ENST00000290158 ITPRIPQ8IWB1 547 aa12.62□□□□□ -0.39
KPNB1-201ENST00000290158 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
KPNB1-201ENST00000290158 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.398e-8■■■■■ 27.2
KPNB1-201ENST00000290158 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
KPNB1-201ENST00000290158 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.61□□□□□ -0.39
KPNB1-201ENST00000290158 MAP7D2Q96T17 732 aa12.61□□□□□ -0.39
KPNB1-201ENST00000290158 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
KPNB1-201ENST00000290158 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
KPNB1-201ENST00000290158 SKOR2Q2VWA4 1001 aaPredicted RBP12.6□□□□□ -0.39
KPNB1-201ENST00000290158 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
KPNB1-201ENST00000290158 RAB3GAP2Q9H2M9 1393 aa12.59□□□□□ -0.39
KPNB1-201ENST00000290158 PHF14O94880 888 aa12.59□□□□□ -0.39
KPNB1-201ENST00000290158 SLC4A10Q6U841 1118 aa12.59□□□□□ -0.39
KPNB1-201ENST00000290158 MTERF4Q7Z6M4 381 aaKnown RBP12.59□□□□□ -0.39
KPNB1-201ENST00000290158 FAM43AQ8N2R8 423 aa12.59□□□□□ -0.39
KPNB1-201ENST00000290158 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
KPNB1-201ENST00000290158 PSME1Q06323 249 aa12.59□□□□□ -0.39
KPNB1-201ENST00000290158 NGEFQ8N5V2 710 aa12.59□□□□□ -0.39
KPNB1-201ENST00000290158 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.4
KPNB1-201ENST00000290158 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
KPNB1-201ENST00000290158 RWDD1Q9H446 243 aaPredicted RBP12.58□□□□□ -0.4
KPNB1-201ENST00000290158 APPP05067 770 aa12.58□□□□□ -0.4
KPNB1-201ENST00000290158 PDE4AP27815 886 aa12.58□□□□□ -0.4
KPNB1-201ENST00000290158 STK31Q9BXU1 1019 aa12.58□□□□□ -0.4
KPNB1-201ENST00000290158 ATF3P18847 181 aa12.58□□□□□ -0.4
KPNB1-201ENST00000290158 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
KPNB1-201ENST00000290158 TPM4P67936 248 aa12.57□□□□□ -0.4
KPNB1-201ENST00000290158 C1orf141Q5JVX7 400 aa12.57□□□□□ -0.4
KPNB1-201ENST00000290158 RSPH4AQ5TD94 716 aa12.55□□□□□ -0.4
KPNB1-201ENST00000290158 FOXD4L6Q3SYB3 417 aaPredicted RBP12.55□□□□□ -0.4
KPNB1-201ENST00000290158 FOXD4L3Q6VB84 417 aaPredicted RBP12.55□□□□□ -0.4
KPNB1-201ENST00000290158 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
KPNB1-201ENST00000290158 PRM3Q9NNZ6 103 aa12.55□□□□□ -0.4
KPNB1-201ENST00000290158 TPM2P07951 284 aa12.55□□□□□ -0.4
KPNB1-201ENST00000290158 TEX35Q5T0J7 233 aa12.55□□□□□ -0.4
KPNB1-201ENST00000290158 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
KPNB1-201ENST00000290158 NUTM2GQ5VZR2 741 aa12.54□□□□□ -0.4
KPNB1-201ENST00000290158 CCDC144AA2RUR9 1427 aa12.54□□□□□ -0.4
KPNB1-201ENST00000290158 COG3Q96JB2 828 aa12.54□□□□□ -0.4
KPNB1-201ENST00000290158 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
KPNB1-201ENST00000290158 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
KPNB1-201ENST00000290158 GPS2Q13227 327 aa12.53□□□□□ -0.4
KPNB1-201ENST00000290158 PIP4K2BP78356 416 aa12.53□□□□□ -0.4
KPNB1-201ENST00000290158 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.52□□□□□ -0.4
KPNB1-201ENST00000290158 FAM161AQ3B820 660 aa12.52□□□□□ -0.4
KPNB1-201ENST00000290158 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.41
KPNB1-201ENST00000290158 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
KPNB1-201ENST00000290158 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.41
KPNB1-201ENST00000290158 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
KPNB1-201ENST00000290158 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.41
KPNB1-201ENST00000290158 NUTM2BA6NNL0 878 aaPredicted RBP12.51□□□□□ -0.41
KPNB1-201ENST00000290158 NUTM2EB1AL46 878 aaPredicted RBP12.51□□□□□ -0.41
KPNB1-201ENST00000290158 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
KPNB1-201ENST00000290158 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
KPNB1-201ENST00000290158 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
KPNB1-201ENST00000290158 NUTM2AQ8IVF1 878 aaPredicted RBP12.51□□□□□ -0.41
KPNB1-201ENST00000290158 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
KPNB1-201ENST00000290158 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
KPNB1-201ENST00000290158 NESP48681 1621 aa12.5□□□□□ -0.41
KPNB1-201ENST00000290158 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
KPNB1-201ENST00000290158 PATL2C9JE40 543 aaKnown RBP12.5□□□□□ -0.41
KPNB1-201ENST00000290158 SMC4Q9NTJ3 1288 aa12.5□□□□□ -0.41
KPNB1-201ENST00000290158 L3MBTL2Q969R5 705 aa12.5□□□□□ -0.41
KPNB1-201ENST00000290158 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
KPNB1-201ENST00000290158 UACAQ9BZF9 1416 aa12.5□□□□□ -0.41
KPNB1-201ENST00000290158 NECTIN2Q92692 538 aa12.49□□□□□ -0.41
KPNB1-201ENST00000290158 CCDC66A2RUB6 948 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms