RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 GOLGA2Q08379 1002 aa21.93■■□□□ 1.1
PCDHA13-201ENST00000289272 CCDC144AA2RUR9 1427 aa21.93■■□□□ 1.1
PCDHA13-201ENST00000289272 USP47Q96K76 1375 aa21.93■■□□□ 1.1
PCDHA13-201ENST00000289272 RRP1P56182 461 aaKnown RBP21.93■■□□□ 1.1
PCDHA13-201ENST00000289272 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
PCDHA13-201ENST00000289272 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
PCDHA13-201ENST00000289272 NGEFQ8N5V2 710 aa21.91■■□□□ 1.1
PCDHA13-201ENST00000289272 SAFB2Q14151 953 aaKnown RBP eCLIP21.91■■□□□ 1.1
PCDHA13-201ENST00000289272 DRC7Q8IY82 874 aa21.91■■□□□ 1.1
PCDHA13-201ENST00000289272 GZF1Q9H116 711 aaPredicted RBP21.91■■□□□ 1.1
PCDHA13-201ENST00000289272 FYCO1Q9BQS8 1478 aa21.89■■□□□ 1.09
PCDHA13-201ENST00000289272 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.88■■□□□ 1.09
PCDHA13-201ENST00000289272 EID1Q9Y6B2 187 aa21.88■■□□□ 1.09
PCDHA13-201ENST00000289272 AAMPQ13685 434 aa21.88■■□□□ 1.09
PCDHA13-201ENST00000289272 WASHC2CQ9Y4E1 1318 aa21.87■■□□□ 1.09
PCDHA13-201ENST00000289272 NCOA2Q15596 1464 aa21.87■■□□□ 1.09
PCDHA13-201ENST00000289272 TNNT3P45378 269 aaPredicted RBP21.87■■□□□ 1.09
PCDHA13-201ENST00000289272 U2AF1L5P0DN76 240 aaPredicted RBP21.86■■□□□ 1.09
PCDHA13-201ENST00000289272 U2AF1Q01081 240 aaKnown RBP eCLIP21.86■■□□□ 1.09
PCDHA13-201ENST00000289272 STK26Q9P289 416 aa21.85■■□□□ 1.09
PCDHA13-201ENST00000289272 SPRYD3Q8NCJ5 442 aa21.85■■□□□ 1.09
PCDHA13-201ENST00000289272 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
PCDHA13-201ENST00000289272 RTF1Q92541 710 aaKnown RBP21.84■■□□□ 1.09
PCDHA13-201ENST00000289272 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
PCDHA13-201ENST00000289272 FAM43AQ8N2R8 423 aa21.84■■□□□ 1.09
PCDHA13-201ENST00000289272 CGNL1Q0VF96 1302 aa21.84■■□□□ 1.09
PCDHA13-201ENST00000289272 PANK3Q9H999 370 aa21.82■■□□□ 1.08
PCDHA13-201ENST00000289272 CCDC7Q96M83 1385 aa21.82■■□□□ 1.08
PCDHA13-201ENST00000289272 TPM2P07951 284 aa21.81■■□□□ 1.08
PCDHA13-201ENST00000289272 CENPJQ9HC77 1338 aaPredicted RBP21.8■■□□□ 1.08
PCDHA13-201ENST00000289272 EFCAB5A4FU69 1503 aa21.79■■□□□ 1.08
PCDHA13-201ENST00000289272 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
PCDHA13-201ENST00000289272 CHMP5Q9NZZ3 219 aa21.79■■□□□ 1.08
PCDHA13-201ENST00000289272 TPM4P67936 248 aa21.79■■□□□ 1.08
PCDHA13-201ENST00000289272 CNTLNQ9NXG0 1405 aa21.78■■□□□ 1.08
PCDHA13-201ENST00000289272 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
PCDHA13-201ENST00000289272 ISY1Q9ULR0 285 aaKnown RBP21.78■■□□□ 1.08
PCDHA13-201ENST00000289272 ST18O60284 1047 aa21.78■■□□□ 1.08
PCDHA13-201ENST00000289272 OS9Q13438 667 aaPredicted RBP21.77■■□□□ 1.08
PCDHA13-201ENST00000289272 KCNJ4P48050 445 aa21.77■■□□□ 1.07
PCDHA13-201ENST00000289272 CCDC146Q8IYE0 955 aa21.77■■□□□ 1.07
PCDHA13-201ENST00000289272 ZNF644Q9H582 1327 aaPredicted RBP21.77■■□□□ 1.07
PCDHA13-201ENST00000289272 KIF7Q2M1P5 1343 aa21.76■■□□□ 1.07
PCDHA13-201ENST00000289272 MRE11P49959 708 aa21.76■■□□□ 1.07
PCDHA13-201ENST00000289272 FGD1P98174 961 aa21.74■■□□□ 1.07
PCDHA13-201ENST00000289272 NPHP1O15259 732 aa21.74■■□□□ 1.07
PCDHA13-201ENST00000289272 TIAM1Q13009 1591 aa21.74■■□□□ 1.07
PCDHA13-201ENST00000289272 NFKBIBQ15653 356 aa21.72■■□□□ 1.07
PCDHA13-201ENST00000289272 KIAA1211Q6ZU35 1233 aa21.72■■□□□ 1.07
PCDHA13-201ENST00000289272 ITPRIPQ8IWB1 547 aa21.72■■□□□ 1.07
PCDHA13-201ENST00000289272 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
PCDHA13-201ENST00000289272 EXOC6Q8TAG9 804 aa21.72■■□□□ 1.07
PCDHA13-201ENST00000289272 STAC3Q96MF2 364 aa21.72■■□□□ 1.07
PCDHA13-201ENST00000289272 KIF16BQ96L93 1317 aa21.71■■□□□ 1.07
PCDHA13-201ENST00000289272 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.07
PCDHA13-201ENST00000289272 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
PCDHA13-201ENST00000289272 E9PSI1 815 aa21.71■■□□□ 1.07
PCDHA13-201ENST00000289272 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
PCDHA13-201ENST00000289272 GOLGA6L1Q8N7Z2 621 aa21.69■■□□□ 1.06
PCDHA13-201ENST00000289272 ANKRD50Q9ULJ7 1429 aa21.69■■□□□ 1.06
PCDHA13-201ENST00000289272 DDX49Q9Y6V7 483 aaKnown RBP21.69■■□□□ 1.06
PCDHA13-201ENST00000289272 HDAC5Q9UQL6 1122 aa21.68■■□□□ 1.06
PCDHA13-201ENST00000289272 ATP6V1DQ9Y5K8 247 aa21.68■■□□□ 1.06
PCDHA13-201ENST00000289272 HMMRO75330 724 aa21.68■■□□□ 1.06
PCDHA13-201ENST00000289272 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
PCDHA13-201ENST00000289272 SOX12O15370 315 aa21.67■■□□□ 1.06
PCDHA13-201ENST00000289272 MIA2Q96PC5 1412 aa21.67■■□□□ 1.06
PCDHA13-201ENST00000289272 LMOD3Q0VAK6 560 aa21.67■■□□□ 1.06
PCDHA13-201ENST00000289272 EHBP1L1Q8N3D4 1523 aa21.67■■□□□ 1.06
PCDHA13-201ENST00000289272 PKNOX2Q96KN3 472 aa21.66■■□□□ 1.06
PCDHA13-201ENST00000289272 TRAK1Q9UPV9 953 aa21.66■■□□□ 1.06
PCDHA13-201ENST00000289272 HFM1A2PYH4 1435 aa21.66■■□□□ 1.06
PCDHA13-201ENST00000289272 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
PCDHA13-201ENST00000289272 TPRNQ4KMQ1 711 aa21.65■■□□□ 1.06
PCDHA13-201ENST00000289272 PAK3O75914 559 aaPredicted RBP21.64■■□□□ 1.06
PCDHA13-201ENST00000289272 CRBNQ96SW2 442 aa21.64■■□□□ 1.05
PCDHA13-201ENST00000289272 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
PCDHA13-201ENST00000289272 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
PCDHA13-201ENST00000289272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.62■■□□□ 1.05
PCDHA13-201ENST00000289272 CLUAP1Q96AJ1 413 aa21.62■■□□□ 1.05
PCDHA13-201ENST00000289272 PLIN1O60240 522 aa21.61■■□□□ 1.05
PCDHA13-201ENST00000289272 CSB-PGBD3P0DP91 1061 aa21.61■■□□□ 1.05
PCDHA13-201ENST00000289272 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
PCDHA13-201ENST00000289272 CHMP4CQ96CF2 233 aa21.61■■□□□ 1.05
PCDHA13-201ENST00000289272 CCDC34Q96HJ3 373 aa21.61■■□□□ 1.05
PCDHA13-201ENST00000289272 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
PCDHA13-201ENST00000289272 RRP9O43818 475 aaKnown RBP21.6■■□□□ 1.05
PCDHA13-201ENST00000289272 PRKCSHP14314 528 aaPredicted RBP21.6■■□□□ 1.05
PCDHA13-201ENST00000289272 NUCB2P80303 420 aa21.6■■□□□ 1.05
PCDHA13-201ENST00000289272 BRD4O60885 1362 aaPredicted RBP21.59■■□□□ 1.05
PCDHA13-201ENST00000289272 NGDNQ8NEJ9 315 aaKnown RBP21.59■■□□□ 1.05
PCDHA13-201ENST00000289272 TPM3P06753 285 aa21.59■■□□□ 1.05
PCDHA13-201ENST00000289272 NUTM2DQ5VT03 806 aaPredicted RBP21.59■■□□□ 1.05
PCDHA13-201ENST00000289272 GPS2Q13227 327 aa21.59■■□□□ 1.05
PCDHA13-201ENST00000289272 SETQ01105 290 aaPredicted RBP21.57■■□□□ 1.04
PCDHA13-201ENST00000289272 CCDC39Q9UFE4 941 aa21.57■■□□□ 1.04
PCDHA13-201ENST00000289272 KIF3AQ9Y496 699 aa21.56■■□□□ 1.04
PCDHA13-201ENST00000289272 EVC2Q86UK5 1308 aa21.56■■□□□ 1.04
PCDHA13-201ENST00000289272 STK31Q9BXU1 1019 aa21.56■■□□□ 1.04
PCDHA13-201ENST00000289272 RRP7AQ9Y3A4 280 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms