RNA–Protein interactions for RNA: ENST00000286758.4

CXCL13-201, Transcript of C-X-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL13, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-201ENST00000286758 FRAT1Q92837 279 aaPredicted RBP14.29□□□□□ -0.12
CXCL13-201ENST00000286758 ARID3AQ99856 593 aa14.29□□□□□ -0.12
CXCL13-201ENST00000286758 MS4A1P11836 297 aa14.28□□□□□ -0.12
CXCL13-201ENST00000286758 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
CXCL13-201ENST00000286758 TCERG1O14776 1098 aaKnown RBP14.26□□□□□ -0.13
CXCL13-201ENST00000286758 TULP1O00294 542 aaPredicted RBP14.25□□□□□ -0.13
CXCL13-201ENST00000286758 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
CXCL13-201ENST00000286758 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
CXCL13-201ENST00000286758 CDAN1Q8IWY9 1227 aa14.24□□□□□ -0.13
CXCL13-201ENST00000286758 KIF20AO95235 890 aa14.23□□□□□ -0.13
CXCL13-201ENST00000286758 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
CXCL13-201ENST00000286758 NFKBIBQ15653 356 aa14.22□□□□□ -0.13
CXCL13-201ENST00000286758 TRIM44Q96DX7 344 aaPredicted RBP14.22□□□□□ -0.13
CXCL13-201ENST00000286758 CHMP4BQ9H444 224 aaKnown RBP14.21□□□□□ -0.13
CXCL13-201ENST00000286758 RRAGDQ9NQL2 400 aaPredicted RBP14.21□□□□□ -0.13
CXCL13-201ENST00000286758 GOLGA6L3A6NEY3 463 aa14.2□□□□□ -0.14
CXCL13-201ENST00000286758 RGS3P49796 1198 aa14.2□□□□□ -0.14
CXCL13-201ENST00000286758 ISY1Q9ULR0 285 aaKnown RBP14.2□□□□□ -0.14
CXCL13-201ENST00000286758 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
CXCL13-201ENST00000286758 PTMSP20962 102 aa14.19□□□□□ -0.14
CXCL13-201ENST00000286758 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
CXCL13-201ENST00000286758 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
CXCL13-201ENST00000286758 CDK11BP21127 795 aaKnown RBP14.17□□□□□ -0.14
CXCL13-201ENST00000286758 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
CXCL13-201ENST00000286758 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
CXCL13-201ENST00000286758 ST18O60284 1047 aa14.16□□□□□ -0.14
CXCL13-201ENST00000286758 PPP1R15AO75807 674 aaPredicted RBP14.15□□□□□ -0.14
CXCL13-201ENST00000286758 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
CXCL13-201ENST00000286758 GTPBP4Q9BZE4 634 aaKnown RBP14.15□□□□□ -0.14
CXCL13-201ENST00000286758 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
CXCL13-201ENST00000286758 DMTNQ08495 405 aa14.14□□□□□ -0.15
CXCL13-201ENST00000286758 AXDND1Q5T1B0 1012 aaPredicted RBP14.14□□□□□ -0.15
CXCL13-201ENST00000286758 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
CXCL13-201ENST00000286758 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
CXCL13-201ENST00000286758 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
CXCL13-201ENST00000286758 LETM1O95202 739 aaPredicted RBP14.13□□□□□ -0.15
CXCL13-201ENST00000286758 OCEL1Q9H607 264 aa14.13□□□□□ -0.15
CXCL13-201ENST00000286758 CLGNO14967 610 aa14.12□□□□□ -0.15
CXCL13-201ENST00000286758 HMGB1P09429 215 aaKnown RBP14.12□□□□□ -0.15
CXCL13-201ENST00000286758 PYGBP11216 843 aa14.12□□□□□ -0.15
CXCL13-201ENST00000286758 SLC20A2Q08357 652 aa14.11□□□□□ -0.15
CXCL13-201ENST00000286758 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
CXCL13-201ENST00000286758 B4GALNT3Q6L9W6 998 aa14.09□□□□□ -0.15
CXCL13-201ENST00000286758 DHX37Q8IY37 1157 aaKnown RBP14.09□□□□□ -0.15
CXCL13-201ENST00000286758 DCAF11Q8TEB1 546 aa14.09□□□□□ -0.15
CXCL13-201ENST00000286758 SNPHO15079 494 aa14.08□□□□□ -0.16
CXCL13-201ENST00000286758 PTMAP06454 111 aaKnown RBP14.08□□□□□ -0.16
CXCL13-201ENST00000286758 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
CXCL13-201ENST00000286758 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.08□□□□□ -0.16
CXCL13-201ENST00000286758 RNF123Q5XPI4 1314 aa14.08□□□□□ -0.16
CXCL13-201ENST00000286758 ZBED9Q6R2W3 1325 aa14.08□□□□□ -0.16
CXCL13-201ENST00000286758 HNRNPUQ00839 825 aaKnown RBP eCLIP14.06□□□□□ -0.16
CXCL13-201ENST00000286758 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.06□□□□□ -0.16
CXCL13-201ENST00000286758 IRX3P78415 501 aaPredicted RBP14.05□□□□□ -0.16
CXCL13-201ENST00000286758 PPP4R3BQ5MIZ7 849 aa14.05□□□□□ -0.16
CXCL13-201ENST00000286758 TMEM121BQ9BXQ6 578 aaPredicted RBP14.05□□□□□ -0.16
CXCL13-201ENST00000286758 BACH2Q9BYV9 841 aa14.05□□□□□ -0.16
CXCL13-201ENST00000286758 ZNF622Q969S3 477 aaKnown RBP eCLIP14.04□□□□□ -0.16
CXCL13-201ENST00000286758 TMEM51Q9NW97 253 aa14.04□□□□□ -0.16
CXCL13-201ENST00000286758 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
CXCL13-201ENST00000286758 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
CXCL13-201ENST00000286758 PCDHB8Q9UN66 801 aa14.03□□□□□ -0.16
CXCL13-201ENST00000286758 MMP14P50281 582 aa14.02□□□□□ -0.17
CXCL13-201ENST00000286758 SECISBP2LQ93073 1101 aaKnown RBP14.02□□□□□ -0.17
CXCL13-201ENST00000286758 ESPNB1AK53 854 aa14.01□□□□□ -0.17
CXCL13-201ENST00000286758 PDE4AP27815 886 aa14.01□□□□□ -0.17
CXCL13-201ENST00000286758 GOLGA2Q08379 1002 aa13.99□□□□□ -0.17
CXCL13-201ENST00000286758 RGS22Q8NE09 1264 aa13.99□□□□□ -0.17
CXCL13-201ENST00000286758 TSPYL1Q9H0U9 437 aa13.99□□□□□ -0.17
CXCL13-201ENST00000286758 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
CXCL13-201ENST00000286758 MRE11P49959 708 aa13.98□□□□□ -0.17
CXCL13-201ENST00000286758 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
CXCL13-201ENST00000286758 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
CXCL13-201ENST00000286758 IRX6P78412 446 aaPredicted RBP13.97□□□□□ -0.17
CXCL13-201ENST00000286758 IFFO2Q5TF58 517 aa13.97□□□□□ -0.17
CXCL13-201ENST00000286758 YY1AP1Q9H869 796 aa13.97□□□□□ -0.17
CXCL13-201ENST00000286758 FSD2A1L4K1 749 aa13.96□□□□□ -0.17
CXCL13-201ENST00000286758 DYNC1I1O14576 645 aa13.96□□□□□ -0.17
CXCL13-201ENST00000286758 ZNF467Q7Z7K2 595 aaPredicted RBP13.96□□□□□ -0.17
CXCL13-201ENST00000286758 DNAJC2Q99543 621 aaKnown RBP13.96□□□□□ -0.17
CXCL13-201ENST00000286758 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
CXCL13-201ENST00000286758 MKRN3Q13064 507 aaKnown RBP13.94□□□□□ -0.18
CXCL13-201ENST00000286758 OFD1O75665 1012 aa13.93□□□□□ -0.18
CXCL13-201ENST00000286758 CEP120Q8N960 986 aa13.93□□□□□ -0.18
CXCL13-201ENST00000286758 CCDC94Q9BW85 323 aaPredicted RBP13.93□□□□□ -0.18
CXCL13-201ENST00000286758 MCCP23508 829 aa13.92□□□□□ -0.18
CXCL13-201ENST00000286758 DNTTIP2Q5QJE6 756 aaKnown RBP13.92□□□□□ -0.18
CXCL13-201ENST00000286758 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
CXCL13-201ENST00000286758 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
CXCL13-201ENST00000286758 GRIPAP1Q4V328 841 aa13.91□□□□□ -0.18
CXCL13-201ENST00000286758 KIAA1211Q6ZU35 1233 aa13.91□□□□□ -0.18
CXCL13-201ENST00000286758 MARVELD3Q96A59 401 aa13.91□□□□□ -0.18
CXCL13-201ENST00000286758 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
CXCL13-201ENST00000286758 ZNF830Q96NB3 372 aaPredicted RBP13.91□□□□□ -0.18
CXCL13-201ENST00000286758 MYH16Q9H6N6 1097 aa13.9□□□□□ -0.18
CXCL13-201ENST00000286758 NESP48681 1621 aa13.9□□□□□ -0.19
CXCL13-201ENST00000286758 PHF14O94880 888 aa13.88□□□□□ -0.19
CXCL13-201ENST00000286758 MMRN1Q13201 1228 aa13.88□□□□□ -0.19
CXCL13-201ENST00000286758 TICAM2Q86XR7 235 aa13.88□□□□□ -0.19
CXCL13-201ENST00000286758 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms