RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 KANK4Q5T7N3 995 aaPredicted RBP13.55□□□□□ -0.24
ERGIC3-201ENST00000279052 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
ERGIC3-201ENST00000279052 PANK2Q9BZ23 570 aa13.54□□□□□ -0.24
ERGIC3-201ENST00000279052 P3H3Q8IVL6 736 aa13.53□□□□□ -0.24
ERGIC3-201ENST00000279052 CFAP44Q96MT7 982 aa13.53□□□□□ -0.24
ERGIC3-201ENST00000279052 DYNC1I1O14576 645 aa13.53□□□□□ -0.24
ERGIC3-201ENST00000279052 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
ERGIC3-201ENST00000279052 MRE11P49959 708 aa13.52□□□□□ -0.24
ERGIC3-201ENST00000279052 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.24
ERGIC3-201ENST00000279052 SLC4A3P48751 1232 aa13.51□□□□□ -0.25
ERGIC3-201ENST00000279052 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
ERGIC3-201ENST00000279052 CUX1P39880 1505 aa13.51□□□□□ -0.25
ERGIC3-201ENST00000279052 HMGXB3Q12766 1538 aa13.5□□□□□ -0.25
ERGIC3-201ENST00000279052 TMEM132AQ24JP5 1023 aa13.49□□□□□ -0.25
ERGIC3-201ENST00000279052 CEP120Q8N960 986 aa13.49□□□□□ -0.25
ERGIC3-201ENST00000279052 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
ERGIC3-201ENST00000279052 EGFL6Q8IUX8 553 aa13.47□□□□□ -0.25
ERGIC3-201ENST00000279052 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
ERGIC3-201ENST00000279052 UQCRHLA0A096LP55 91 aa13.47□□□□□ -0.25
ERGIC3-201ENST00000279052 UQCRHP07919 91 aa13.47□□□□□ -0.25
ERGIC3-201ENST00000279052 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
ERGIC3-201ENST00000279052 CFTRP13569 1480 aa13.45□□□□□ -0.26
ERGIC3-201ENST00000279052 CHMP4CQ96CF2 233 aa13.45□□□□□ -0.26
ERGIC3-201ENST00000279052 ISY1Q9ULR0 285 aaKnown RBP13.45□□□□□ -0.26
ERGIC3-201ENST00000279052 RNF123Q5XPI4 1314 aa13.44□□□□□ -0.26
ERGIC3-201ENST00000279052 KCNJ4P48050 445 aa13.44□□□□□ -0.26
ERGIC3-201ENST00000279052 PSMD1Q99460 953 aa13.44□□□□□ -0.26
ERGIC3-201ENST00000279052 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
ERGIC3-201ENST00000279052 KCNA4P22459 653 aa13.44□□□□□ -0.26
ERGIC3-201ENST00000279052 NBPF20Q3BBV1 942 aa13.44□□□□□ -0.26
ERGIC3-201ENST00000279052 R3HCC1Q9Y3T6 440 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-201ENST00000279052 ARHGAP35Q9NRY4 1499 aa13.43□□□□□ -0.26
ERGIC3-201ENST00000279052 TSPYL1Q9H0U9 437 aa13.43□□□□□ -0.26
ERGIC3-201ENST00000279052 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
ERGIC3-201ENST00000279052 SETQ01105 290 aaPredicted RBP13.41□□□□□ -0.26
ERGIC3-201ENST00000279052 ZSCAN30Q86W11 494 aa13.4□□□□□ -0.26
ERGIC3-201ENST00000279052 BANK1Q8NDB2 785 aa13.4□□□□□ -0.26
ERGIC3-201ENST00000279052 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
ERGIC3-201ENST00000279052 CBX1P83916 185 aa13.4□□□□□ -0.27
ERGIC3-201ENST00000279052 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.27
ERGIC3-201ENST00000279052 PHLDB1Q86UU1 1377 aa13.39□□□□□ -0.27
ERGIC3-201ENST00000279052 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
ERGIC3-201ENST00000279052 CUX2O14529 1486 aa13.39□□□□□ -0.27
ERGIC3-201ENST00000279052 MSNP26038 577 aaKnown RBP13.39□□□□□ -0.27
ERGIC3-201ENST00000279052 LMOD3Q0VAK6 560 aa13.39□□□□□ -0.27
ERGIC3-201ENST00000279052 HSP90AB3PQ58FF7 597 aa13.38□□□□□ -0.27
ERGIC3-201ENST00000279052 CCDC66A2RUB6 948 aa13.38□□□□□ -0.27
ERGIC3-201ENST00000279052 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
ERGIC3-201ENST00000279052 TRIM34Q9BYJ4 488 aa13.37□□□□□ -0.27
ERGIC3-201ENST00000279052 EFCC1Q9HA90 598 aa13.37□□□□□ -0.27
ERGIC3-201ENST00000279052 SMG6Q86US8 1419 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-201ENST00000279052 ZNF771Q7L3S4 317 aaPredicted RBP13.36□□□□□ -0.27
ERGIC3-201ENST00000279052 IGF1RP08069 1367 aa13.36□□□□□ -0.27
ERGIC3-201ENST00000279052 ZBTB9Q96C00 473 aa13.36□□□□□ -0.27
ERGIC3-201ENST00000279052 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
ERGIC3-201ENST00000279052 SH3BP1Q9Y3L3 701 aa13.35□□□□□ -0.27
ERGIC3-201ENST00000279052 LOC102724159A0A0B4J2E5 919 aa13.35□□□□□ -0.27
ERGIC3-201ENST00000279052 PWP2Q15269 919 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-201ENST00000279052 NBPF1Q3BBV0 1214 aa13.35□□□□□ -0.27
ERGIC3-201ENST00000279052 AKNAQ7Z591 1439 aa13.34□□□□□ -0.27
ERGIC3-201ENST00000279052 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
ERGIC3-201ENST00000279052 RAB3GAP2Q9H2M9 1393 aa13.34□□□□□ -0.27
ERGIC3-201ENST00000279052 BECN1Q14457 450 aa13.33□□□□□ -0.28
ERGIC3-201ENST00000279052 TULP2O00295 520 aa13.33□□□□□ -0.28
ERGIC3-201ENST00000279052 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
ERGIC3-201ENST00000279052 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
ERGIC3-201ENST00000279052 IRF6O14896 467 aa13.32□□□□□ -0.28
ERGIC3-201ENST00000279052 SASS6Q6UVJ0 657 aa13.32□□□□□ -0.28
ERGIC3-201ENST00000279052 CSPP1Q1MSJ5 1256 aa13.31□□□□□ -0.28
ERGIC3-201ENST00000279052 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
ERGIC3-201ENST00000279052 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
ERGIC3-201ENST00000279052 SATB1Q01826 763 aa13.31□□□□□ -0.28
ERGIC3-201ENST00000279052 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
ERGIC3-201ENST00000279052 TIAM1Q13009 1591 aa13.31□□□□□ -0.28
ERGIC3-201ENST00000279052 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
ERGIC3-201ENST00000279052 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
ERGIC3-201ENST00000279052 CADPSQ9ULU8 1353 aa13.3□□□□□ -0.28
ERGIC3-201ENST00000279052 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
ERGIC3-201ENST00000279052 MYCBPQ99417 103 aaPredicted RBP13.3□□□□□ -0.28
ERGIC3-201ENST00000279052 FAM50AQ14320 339 aaKnown RBP13.3□□□□□ -0.28
ERGIC3-201ENST00000279052 CEP83Q9Y592 693 aa13.3□□□□□ -0.28
ERGIC3-201ENST00000279052 NBPF11Q86T75 865 aa13.29□□□□□ -0.28
ERGIC3-201ENST00000279052 GPATCH11Q8N954 259 aa13.29□□□□□ -0.28
ERGIC3-201ENST00000279052 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
ERGIC3-201ENST00000279052 NUDCQ9Y266 331 aa13.29□□□□□ -0.28
ERGIC3-201ENST00000279052 SETD5Q9C0A6 1442 aa13.29□□□□□ -0.28
ERGIC3-201ENST00000279052 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
ERGIC3-201ENST00000279052 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-201ENST00000279052 ZNF500O60304 480 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-201ENST00000279052 CAPN2P17655 700 aa13.28□□□□□ -0.28
ERGIC3-201ENST00000279052 ANAPC15P60006 121 aa13.28□□□□□ -0.28
ERGIC3-201ENST00000279052 GZF1Q9H116 711 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-201ENST00000279052 LRRC9Q6ZRR7 1453 aa13.28□□□□□ -0.28
ERGIC3-201ENST00000279052 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.28
ERGIC3-201ENST00000279052 GOLIM4O00461 696 aa13.27□□□□□ -0.28
ERGIC3-201ENST00000279052 ATP2B3Q16720 1220 aa13.27□□□□□ -0.28
ERGIC3-201ENST00000279052 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
ERGIC3-201ENST00000279052 TTC36A6NLP5 189 aa13.26□□□□□ -0.29
ERGIC3-201ENST00000279052 MAP2K1Q02750 393 aaPredicted RBP13.26□□□□□ -0.29
ERGIC3-201ENST00000279052 PPP1R9BQ96SB3 815 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms