RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 IVNS1ABPQ9Y6Y0 642 aa8.35□□□□□ -1.07
LIN7C-201ENST00000278193 CECR2Q9BXF3 1484 aa8.35□□□□□ -1.07
LIN7C-201ENST00000278193 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
LIN7C-201ENST00000278193 SEMA3EO15041 775 aa8.35□□□□□ -1.07
LIN7C-201ENST00000278193 ERCC3P19447 782 aa8.35□□□□□ -1.07
LIN7C-201ENST00000278193 CADPSQ9ULU8 1353 aa8.35□□□□□ -1.07
LIN7C-201ENST00000278193 FAM117AQ9C073 453 aa8.35□□□□□ -1.07
LIN7C-201ENST00000278193 AXDND1Q5T1B0 1012 aaPredicted RBP8.34□□□□□ -1.07
LIN7C-201ENST00000278193 MIER1Q8N108 512 aa8.34□□□□□ -1.07
LIN7C-201ENST00000278193 CSB-PGBD3P0DP91 1061 aa8.33□□□□□ -1.08
LIN7C-201ENST00000278193 IBSPP21815 317 aaPredicted RBP8.33□□□□□ -1.08
LIN7C-201ENST00000278193 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
LIN7C-201ENST00000278193 WWC3Q9ULE0 1092 aa8.33□□□□□ -1.08
LIN7C-201ENST00000278193 ZFYVE27Q5T4F4 411 aa8.33□□□□□ -1.08
LIN7C-201ENST00000278193 CCER2I3L3R5 266 aa8.33□□□□□ -1.08
LIN7C-201ENST00000278193 RAB11FIP3O75154 756 aa8.33□□□□□ -1.08
LIN7C-201ENST00000278193 ZMYND10O75800 440 aa8.33□□□□□ -1.08
LIN7C-201ENST00000278193 METTL14Q9HCE5 456 aaKnown RBP8.33□□□□□ -1.08
LIN7C-201ENST00000278193 BAZ1AQ9NRL2 1556 aaPredicted RBP8.33□□□□□ -1.08
LIN7C-201ENST00000278193 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
LIN7C-201ENST00000278193 RNF216Q9NWF9 866 aaPredicted RBP8.32□□□□□ -1.08
LIN7C-201ENST00000278193 NRDCO43847 1150 aa8.32□□□□□ -1.08
LIN7C-201ENST00000278193 KIF4AO95239 1232 aa8.32□□□□□ -1.08
LIN7C-201ENST00000278193 KCNA1Q09470 495 aa8.32□□□□□ -1.08
LIN7C-201ENST00000278193 NKX1-1Q15270 411 aaPredicted RBP8.32□□□□□ -1.08
LIN7C-201ENST00000278193 LONRF3Q496Y0 759 aa8.32□□□□□ -1.08
LIN7C-201ENST00000278193 PNMA2Q9UL42 364 aa8.32□□□□□ -1.08
LIN7C-201ENST00000278193 WDHD1O75717 1129 aaPredicted RBP8.31□□□□□ -1.08
LIN7C-201ENST00000278193 ATF5Q9Y2D1 282 aaPredicted RBP8.31□□□□□ -1.08
LIN7C-201ENST00000278193 UNCXA6NJT0 531 aa8.31□□□□□ -1.08
LIN7C-201ENST00000278193 PDE4DQ08499 809 aa8.31□□□□□ -1.08
LIN7C-201ENST00000278193 IGBP1P78318 339 aa8.3□□□□□ -1.08
LIN7C-201ENST00000278193 hCG_2014768A0A024R1R8 64 aa8.3□□□□□ -1.08
LIN7C-201ENST00000278193 SMARCA2P51531 1590 aa8.3□□□□□ -1.08
LIN7C-201ENST00000278193 CCDC181Q5TID7 509 aa8.3□□□□□ -1.08
LIN7C-201ENST00000278193 PDS5BQ9NTI5 1447 aa8.3□□□□□ -1.08
LIN7C-201ENST00000278193 FOXD4Q12950 439 aaPredicted RBP8.3□□□□□ -1.08
LIN7C-201ENST00000278193 ARID4AP29374 1257 aaPredicted RBP8.29□□□□□ -1.08
LIN7C-201ENST00000278193 RINLQ6ZS11 566 aa8.29□□□□□ -1.08
LIN7C-201ENST00000278193 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
LIN7C-201ENST00000278193 RFX1P22670 979 aa8.29□□□□□ -1.08
LIN7C-201ENST00000278193 CHRM1P11229 460 aaPredicted RBP8.29□□□□□ -1.08
LIN7C-201ENST00000278193 UBXN4Q92575 508 aa8.29□□□□□ -1.08
LIN7C-201ENST00000278193 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.29□□□□□ -1.08
LIN7C-201ENST00000278193 ZNF330Q9Y3S2 320 aaPredicted RBP8.29□□□□□ -1.08
LIN7C-201ENST00000278193 MAP4K4O95819 1239 aaPredicted RBP8.28□□□□□ -1.08
LIN7C-201ENST00000278193 PCMTD1Q96MG8 357 aaPredicted RBP8.28□□□□□ -1.08
LIN7C-201ENST00000278193 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
LIN7C-201ENST00000278193 CREBRFQ8IUR6 639 aa8.28□□□□□ -1.08
LIN7C-201ENST00000278193 TCF3P15923 654 aa8.27□□□□□ -1.08
LIN7C-201ENST00000278193 HSP90AB2PQ58FF8 381 aa8.27□□□□□ -1.08
LIN7C-201ENST00000278193 KRBA2Q6ZNG9 492 aa8.27□□□□□ -1.08
LIN7C-201ENST00000278193 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.08
LIN7C-201ENST00000278193 LMOD3Q0VAK6 560 aa8.27□□□□□ -1.09
LIN7C-201ENST00000278193 ARMCX6Q7L4S7 300 aa8.27□□□□□ -1.09
LIN7C-201ENST00000278193 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
LIN7C-201ENST00000278193 UBA5Q9GZZ9 404 aa8.27□□□□□ -1.09
LIN7C-201ENST00000278193 SUGT1Q9Y2Z0 365 aa8.27□□□□□ -1.09
LIN7C-201ENST00000278193 CREB3O43889 395 aa8.27□□□□□ -1.09
LIN7C-201ENST00000278193 PPP1R15AO75807 674 aaPredicted RBP8.27□□□□□ -1.09
LIN7C-201ENST00000278193 POLD1P28340 1107 aa8.27□□□□□ -1.09
LIN7C-201ENST00000278193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.26□□□□□ -1.096e-7■■■■■ 83.3
LIN7C-201ENST00000278193 CALR3Q96L12 384 aaKnown RBP8.26□□□□□ -1.09
LIN7C-201ENST00000278193 POLA2Q14181 598 aa8.26□□□□□ -1.09
LIN7C-201ENST00000278193 SGSM3Q96HU1 749 aa8.26□□□□□ -1.09
LIN7C-201ENST00000278193 TMA7Q9Y2S6 64 aaKnown RBP8.26□□□□□ -1.09
LIN7C-201ENST00000278193 SF3A1Q15459 793 aaKnown RBP8.25□□□□□ -1.09
LIN7C-201ENST00000278193 SND1Q7KZF4 910 aaKnown RBP eCLIP8.25□□□□□ -1.09
LIN7C-201ENST00000278193 MAGEC2Q9UBF1 373 aaPredicted RBP8.25□□□□□ -1.09
LIN7C-201ENST00000278193 GOLIM4O00461 696 aa8.25□□□□□ -1.09
LIN7C-201ENST00000278193 ZNF662Q6ZS27 426 aa8.24□□□□□ -1.09
LIN7C-201ENST00000278193 CCAR1Q8IX12 1150 aaKnown RBP8.24□□□□□ -1.09
LIN7C-201ENST00000278193 STK24Q9Y6E0 443 aa8.24□□□□□ -1.09
LIN7C-201ENST00000278193 TNNT2P45379 298 aaPredicted RBP8.24□□□□□ -1.09
LIN7C-201ENST00000278193 KLHL42Q9P2K6 505 aa8.24□□□□□ -1.09
LIN7C-201ENST00000278193 KCNG1Q9UIX4 513 aa8.24□□□□□ -1.09
LIN7C-201ENST00000278193 TRIM44Q96DX7 344 aaPredicted RBP8.23□□□□□ -1.09
LIN7C-201ENST00000278193 GPIHBP1Q8IV16 184 aa8.23□□□□□ -1.09
LIN7C-201ENST00000278193 MTA3Q9BTC8 594 aa8.23□□□□□ -1.09
LIN7C-201ENST00000278193 ZRANB2O95218 330 aaKnown RBP eCLIP8.23□□□□□ -1.09
LIN7C-201ENST00000278193 TTC36A6NLP5 189 aa8.23□□□□□ -1.09
LIN7C-201ENST00000278193 SOX12O15370 315 aa8.23□□□□□ -1.09
LIN7C-201ENST00000278193 LIG1P18858 919 aa8.23□□□□□ -1.09
LIN7C-201ENST00000278193 PAX3P23760 479 aa8.23□□□□□ -1.09
LIN7C-201ENST00000278193 CC2D1BQ5T0F9 858 aaKnown RBP8.23□□□□□ -1.09
LIN7C-201ENST00000278193 HSP90AA1P07900 732 aaKnown RBP8.22□□□□□ -1.09
LIN7C-201ENST00000278193 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
LIN7C-201ENST00000278193 FRMD4BQ9Y2L6 1034 aa8.22□□□□□ -1.09
LIN7C-201ENST00000278193 TRIM66O15016 1216 aa8.21□□□□□ -1.09
LIN7C-201ENST00000278193 STK10O94804 968 aaKnown RBP8.21□□□□□ -1.09
LIN7C-201ENST00000278193 GIMAP6Q6P9H5 292 aa8.21□□□□□ -1.09
LIN7C-201ENST00000278193 PAF1Q8N7H5 531 aa8.21□□□□□ -1.1
LIN7C-201ENST00000278193 PDILTQ8N807 584 aa8.21□□□□□ -1.1
LIN7C-201ENST00000278193 DNAJC5BQ9UF47 199 aa8.21□□□□□ -1.1
LIN7C-201ENST00000278193 HDAC5Q9UQL6 1122 aa8.21□□□□□ -1.1
LIN7C-201ENST00000278193 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
LIN7C-201ENST00000278193 BCL2L13Q9BXK5 485 aa8.21□□□□□ -1.1
LIN7C-201ENST00000278193 SLC52A1Q9NWF4 448 aa8.2□□□□□ -1.1
LIN7C-201ENST00000278193 CARNS1A5YM72 827 aa8.2□□□□□ -1.1
LIN7C-201ENST00000278193 TCERG1O14776 1098 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms