RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
HERC6-202ENST00000273960 HSP90AA1P07900 732 aaKnown RBP16.67■□□□□ 0.26
HERC6-202ENST00000273960 USP47Q96K76 1375 aa16.67■□□□□ 0.26
HERC6-202ENST00000273960 ADAMTS12P58397 1594 aa16.67■□□□□ 0.26
HERC6-202ENST00000273960 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
HERC6-202ENST00000273960 SUPT6HQ7KZ85 1726 aaKnown RBP16.66■□□□□ 0.26
HERC6-202ENST00000273960 PTPRGP23470 1445 aa16.65■□□□□ 0.26
HERC6-202ENST00000273960 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
HERC6-202ENST00000273960 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
HERC6-202ENST00000273960 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
HERC6-202ENST00000273960 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
HERC6-202ENST00000273960 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
HERC6-202ENST00000273960 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
HERC6-202ENST00000273960 SAMD9Q5K651 1589 aa16.62■□□□□ 0.25
HERC6-202ENST00000273960 NUP155O75694 1391 aa16.61■□□□□ 0.25
HERC6-202ENST00000273960 SEC24BO95487 1268 aa16.61■□□□□ 0.25
HERC6-202ENST00000273960 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
HERC6-202ENST00000273960 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
HERC6-202ENST00000273960 NUP153P49790 1475 aaKnown RBP16.6■□□□□ 0.25
HERC6-202ENST00000273960 DISP1Q96F81 1524 aa16.59■□□□□ 0.25
HERC6-202ENST00000273960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.58■□□□□ 0.25
HERC6-202ENST00000273960 DENND4BO75064 1496 aaPredicted RBP16.58■□□□□ 0.24
HERC6-202ENST00000273960 WDR62O43379 1518 aa16.57■□□□□ 0.24
HERC6-202ENST00000273960 UGGT2Q9NYU1 1516 aa16.57■□□□□ 0.24
HERC6-202ENST00000273960 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
HERC6-202ENST00000273960 XRCC6P12956 609 aaKnown RBP eCLIP16.57■□□□□ 0.24
HERC6-202ENST00000273960 GOLGA6L3A6NEY3 463 aa16.56■□□□□ 0.24
HERC6-202ENST00000273960 DAPK1P53355 1430 aa16.56■□□□□ 0.24
HERC6-202ENST00000273960 CENPQQ7L2Z9 268 aaPredicted RBP16.55■□□□□ 0.24
HERC6-202ENST00000273960 TROQ12816 1431 aaPredicted RBP16.55■□□□□ 0.24
HERC6-202ENST00000273960 KDM6BO15054 1643 aa16.55■□□□□ 0.24
HERC6-202ENST00000273960 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
HERC6-202ENST00000273960 ABCC5O15440 1437 aa16.55■□□□□ 0.24
HERC6-202ENST00000273960 L1TD1Q5T7N2 865 aaKnown RBP16.54■□□□□ 0.24
HERC6-202ENST00000273960 ANKRD30AQ9BXX3 1397 aa16.54■□□□□ 0.24
HERC6-202ENST00000273960 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
HERC6-202ENST00000273960 KIF15Q9NS87 1388 aa16.53■□□□□ 0.24
HERC6-202ENST00000273960 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
HERC6-202ENST00000273960 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
HERC6-202ENST00000273960 CCDC146Q8IYE0 955 aa16.53■□□□□ 0.24
HERC6-202ENST00000273960 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
HERC6-202ENST00000273960 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.24
HERC6-202ENST00000273960 SPATA31E1Q6ZUB1 1445 aa16.52■□□□□ 0.24
HERC6-202ENST00000273960 CANXP27824 592 aaKnown RBP16.52■□□□□ 0.23
HERC6-202ENST00000273960 MIA2Q96PC5 1412 aa16.52■□□□□ 0.23
HERC6-202ENST00000273960 KIAA0556O60303 1618 aa16.51■□□□□ 0.23
HERC6-202ENST00000273960 BECN1Q14457 450 aa16.51■□□□□ 0.23
HERC6-202ENST00000273960 RALBP1Q15311 655 aa16.51■□□□□ 0.23
HERC6-202ENST00000273960 ADAMTS8Q9UP79 889 aa16.5■□□□□ 0.23
HERC6-202ENST00000273960 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
HERC6-202ENST00000273960 BCAR3O75815 825 aa16.5■□□□□ 0.23
HERC6-202ENST00000273960 PDE3BQ13370 1112 aa16.5■□□□□ 0.23
HERC6-202ENST00000273960 RBM10P98175 930 aaKnown RBP16.48■□□□□ 0.23
HERC6-202ENST00000273960 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
HERC6-202ENST00000273960 ZBTB7CA1YPR0 619 aa16.48■□□□□ 0.23
HERC6-202ENST00000273960 IGHDP01880 384 aa16.48■□□□□ 0.23
HERC6-202ENST00000273960 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
HERC6-202ENST00000273960 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
HERC6-202ENST00000273960 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
HERC6-202ENST00000273960 LRPPRCP42704 1394 aaKnown RBP16.46■□□□□ 0.23
HERC6-202ENST00000273960 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
HERC6-202ENST00000273960 ANKRD50Q9ULJ7 1429 aa16.46■□□□□ 0.23
HERC6-202ENST00000273960 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
HERC6-202ENST00000273960 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
HERC6-202ENST00000273960 TRIM44Q96DX7 344 aaPredicted RBP16.45■□□□□ 0.22
HERC6-202ENST00000273960 COG6Q9Y2V7 657 aa16.44■□□□□ 0.22
HERC6-202ENST00000273960 GPATCH8Q9UKJ3 1502 aaKnown RBP16.44■□□□□ 0.22
HERC6-202ENST00000273960 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
HERC6-202ENST00000273960 RPRD2Q5VT52 1461 aaKnown RBP16.44■□□□□ 0.22
HERC6-202ENST00000273960 RRP9O43818 475 aaKnown RBP16.43■□□□□ 0.22
HERC6-202ENST00000273960 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
HERC6-202ENST00000273960 MYH16Q9H6N6 1097 aa16.43■□□□□ 0.22
HERC6-202ENST00000273960 PANK3Q9H999 370 aa16.43■□□□□ 0.22
HERC6-202ENST00000273960 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
HERC6-202ENST00000273960 ATP10BO94823 1461 aa16.43■□□□□ 0.22
HERC6-202ENST00000273960 NPM1P06748 294 aaKnown RBP eCLIP16.43■□□□□ 0.22
HERC6-202ENST00000273960 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
HERC6-202ENST00000273960 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.42■□□□□ 0.22
HERC6-202ENST00000273960 UPF2Q9HAU5 1272 aaKnown RBP16.42■□□□□ 0.22
HERC6-202ENST00000273960 BCORL1Q5H9F3 1711 aa16.41■□□□□ 0.22
HERC6-202ENST00000273960 TEX14Q8IWB6 1497 aa16.41■□□□□ 0.22
HERC6-202ENST00000273960 BCL2L13Q9BXK5 485 aa16.4■□□□□ 0.22
HERC6-202ENST00000273960 TRAK2O60296 914 aa16.4■□□□□ 0.22
HERC6-202ENST00000273960 CLCN1P35523 988 aa16.4■□□□□ 0.22
HERC6-202ENST00000273960 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
HERC6-202ENST00000273960 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
HERC6-202ENST00000273960 USP19O94966 1318 aa16.4■□□□□ 0.22
HERC6-202ENST00000273960 ERBB4Q15303 1308 aa16.4■□□□□ 0.22
HERC6-202ENST00000273960 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
HERC6-202ENST00000273960 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.22
HERC6-202ENST00000273960 ESPNB1AK53 854 aa16.39■□□□□ 0.21
HERC6-202ENST00000273960 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
HERC6-202ENST00000273960 KIF14Q15058 1648 aa16.39■□□□□ 0.21
HERC6-202ENST00000273960 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.21
HERC6-202ENST00000273960 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
HERC6-202ENST00000273960 MCM4P33991 863 aa16.38■□□□□ 0.21
HERC6-202ENST00000273960 SPINK5Q9NQ38 1064 aaPredicted RBP16.38■□□□□ 0.21
HERC6-202ENST00000273960 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
HERC6-202ENST00000273960 NUP160Q12769 1436 aa16.37■□□□□ 0.21
HERC6-202ENST00000273960 TCOF1Q13428 1488 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms