RNA–Protein interactions for RNA: ENST00000270361.15

CAPN10-201, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,453 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-201ENST00000270361 NOP58Q9Y2X3 529 aaKnown RBP28.49■■■□□ 2.15
CAPN10-201ENST00000270361 ARHGEF5Q12774 1597 aa28.49■■■□□ 2.15
CAPN10-201ENST00000270361 ATP10BO94823 1461 aa28.49■■■□□ 2.15
CAPN10-201ENST00000270361 FBLN2P98095 1184 aa28.47■■■□□ 2.15
CAPN10-201ENST00000270361 DCAF11Q8TEB1 546 aa28.46■■■□□ 2.15
CAPN10-201ENST00000270361 KDM2AQ9Y2K7 1162 aa28.44■■■□□ 2.14
CAPN10-201ENST00000270361 RSPH4AQ5TD94 716 aa28.43■■■□□ 2.14
CAPN10-201ENST00000270361 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
CAPN10-201ENST00000270361 E9PCH4 1651 aa28.41■■■□□ 2.14
CAPN10-201ENST00000270361 NLRP13Q86W25 1043 aa28.38■■■□□ 2.13
CAPN10-201ENST00000270361 CCDC141Q6ZP82 1450 aa28.38■■■□□ 2.13
CAPN10-201ENST00000270361 ANP32AP39687 249 aaKnown RBP28.37■■■□□ 2.13
CAPN10-201ENST00000270361 FAM135AQ9P2D6 1515 aa28.37■■■□□ 2.13
CAPN10-201ENST00000270361 HNRNPMP52272 730 aaKnown RBP eCLIP28.36■■■□□ 2.13
CAPN10-201ENST00000270361 PDE3BQ13370 1112 aa28.36■■■□□ 2.13
CAPN10-201ENST00000270361 CCDC144AA2RUR9 1427 aa28.34■■■□□ 2.13
CAPN10-201ENST00000270361 PRAG1Q86YV5 1406 aa28.34■■■□□ 2.13
CAPN10-201ENST00000270361 PARD3Q8TEW0 1356 aa28.34■■■□□ 2.13
CAPN10-201ENST00000270361 IPO9Q96P70 1041 aaKnown RBP28.33■■■□□ 2.13
CAPN10-201ENST00000270361 RRP1P56182 461 aaKnown RBP28.32■■■□□ 2.12
CAPN10-201ENST00000270361 WASHC2CQ9Y4E1 1318 aa28.32■■■□□ 2.12
CAPN10-201ENST00000270361 DEKP35659 375 aaKnown RBP28.32■■■□□ 2.12
CAPN10-201ENST00000270361 GPRASP1Q5JY77 1395 aa28.3■■■□□ 2.12
CAPN10-201ENST00000270361 TRPM1Q7Z4N2 1603 aa28.3■■■□□ 2.12
CAPN10-201ENST00000270361 PAK3O75914 559 aaPredicted RBP28.3■■■□□ 2.12
CAPN10-201ENST00000270361 INSRP06213 1382 aa28.28■■■□□ 2.12
CAPN10-201ENST00000270361 RCAN3Q9UKA8 241 aa28.28■■■□□ 2.12
CAPN10-201ENST00000270361 SAMD9LQ8IVG5 1584 aa28.27■■■□□ 2.12
CAPN10-201ENST00000270361 PREX2Q70Z35 1606 aa28.27■■■□□ 2.12
CAPN10-201ENST00000270361 ZMYM4Q5VZL5 1548 aa28.25■■■□□ 2.11
CAPN10-201ENST00000270361 LAMC1P11047 1609 aa28.25■■■□□ 2.11
CAPN10-201ENST00000270361 SENP3-EIF4A1A0A087X0R7 540 aa28.23■■■□□ 2.11
CAPN10-201ENST00000270361 PER1O15534 1290 aaPredicted RBP28.23■■■□□ 2.11
CAPN10-201ENST00000270361 ZBTB47Q9UFB7 747 aaPredicted RBP28.23■■■□□ 2.11
CAPN10-201ENST00000270361 UNC13BO14795 1591 aa28.22■■■□□ 2.11
CAPN10-201ENST00000270361 MAST1Q9Y2H9 1570 aa28.22■■■□□ 2.11
CAPN10-201ENST00000270361 COL17A1Q9UMD9 1497 aaPredicted RBP28.21■■■□□ 2.11
CAPN10-201ENST00000270361 TCERG1O14776 1098 aaKnown RBP28.21■■■□□ 2.11
CAPN10-201ENST00000270361 CDC42BPBQ9Y5S2 1711 aa28.2■■■□□ 2.11
CAPN10-201ENST00000270361 NBR1Q14596 966 aa28.18■■■□□ 2.1
CAPN10-201ENST00000270361 EIF2AK4Q9P2K8 1649 aaKnown RBP28.18■■■□□ 2.1
CAPN10-201ENST00000270361 PRDM15P57071 1507 aaPredicted RBP28.18■■■□□ 2.1
CAPN10-201ENST00000270361 A2MP01023 1474 aa28.17■■■□□ 2.1
CAPN10-201ENST00000270361 EXOC6Q8TAG9 804 aa28.17■■■□□ 2.1
CAPN10-201ENST00000270361 PLA2R1Q13018 1463 aa28.16■■■□□ 2.1
CAPN10-201ENST00000270361 NBPF1Q3BBV0 1214 aa28.15■■■□□ 2.1
CAPN10-201ENST00000270361 RGL3Q3MIN7 710 aa28.15■■■□□ 2.1
CAPN10-201ENST00000270361 TESK2Q96S53 571 aa28.13■■■□□ 2.09
CAPN10-201ENST00000270361 PLEKHH2Q8IVE3 1493 aa28.13■■■□□ 2.09
CAPN10-201ENST00000270361 SYCP2Q9BX26 1530 aa28.13■■■□□ 2.09
CAPN10-201ENST00000270361 MS4A1P11836 297 aa28.12■■■□□ 2.09
CAPN10-201ENST00000270361 BLMP54132 1417 aaPredicted RBP28.12■■■□□ 2.09
CAPN10-201ENST00000270361 ATP10AO60312 1499 aa28.12■■■□□ 2.09
CAPN10-201ENST00000270361 IQGAP3Q86VI3 1631 aa28.12■■■□□ 2.09
CAPN10-201ENST00000270361 PLXNC1O60486 1568 aa28.11■■■□□ 2.09
CAPN10-201ENST00000270361 TMF1P82094 1093 aa28.11■■■□□ 2.09
CAPN10-201ENST00000270361 ERBINQ96RT1 1412 aa28.11■■■□□ 2.09
CAPN10-201ENST00000270361 ARHGAP5Q13017 1502 aa28.1■■■□□ 2.09
CAPN10-201ENST00000270361 RTL5Q5HYW3 569 aaPredicted RBP28.09■■■□□ 2.09
CAPN10-201ENST00000270361 SALL2Q9Y467 1007 aaPredicted RBP28.09■■■□□ 2.09
CAPN10-201ENST00000270361 DISP3Q9P2K9 1392 aa28.09■■■□□ 2.09
CAPN10-201ENST00000270361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.07■■■□□ 2.085e-6■■■■□ 19.5
CAPN10-201ENST00000270361 PANK3Q9H999 370 aa28.06■■■□□ 2.08
CAPN10-201ENST00000270361 CC2D1BQ5T0F9 858 aaKnown RBP28.06■■■□□ 2.08
CAPN10-201ENST00000270361 DUOX2Q9NRD8 1548 aa28.05■■■□□ 2.08
CAPN10-201ENST00000270361 MAGI2Q86UL8 1455 aa28.03■■■□□ 2.08
CAPN10-201ENST00000270361 CDCA7LQ96GN5 454 aa28.02■■■□□ 2.08
CAPN10-201ENST00000270361 PDE4AP27815 886 aa28.02■■■□□ 2.08
CAPN10-201ENST00000270361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.02■■■□□ 2.08
CAPN10-201ENST00000270361 TTC37Q6PGP7 1564 aa28.02■■■□□ 2.08
CAPN10-201ENST00000270361 MYO5CQ9NQX4 1742 aa28.01■■■□□ 2.07
CAPN10-201ENST00000270361 BACH2Q9BYV9 841 aa27.99■■■□□ 2.07
CAPN10-201ENST00000270361 RNF17Q9BXT8 1623 aaKnown RBP27.96■■■□□ 2.07
CAPN10-201ENST00000270361 STAC3Q96MF2 364 aa27.93■■■□□ 2.06
CAPN10-201ENST00000270361 CDCA8Q53HL2 280 aa27.93■■■□□ 2.06
CAPN10-201ENST00000270361 NPM2Q86SE8 214 aaKnown RBP27.92■■■□□ 2.06
CAPN10-201ENST00000270361 KNSTRNQ9Y448 316 aa27.9■■■□□ 2.06
CAPN10-201ENST00000270361 USP35Q9P2H5 1018 aa27.9■■■□□ 2.06
CAPN10-201ENST00000270361 ABCC2Q92887 1545 aa27.89■■■□□ 2.06
CAPN10-201ENST00000270361 CRBNQ96SW2 442 aa27.89■■■□□ 2.05
CAPN10-201ENST00000270361 PLIN1O60240 522 aa27.88■■■□□ 2.05
CAPN10-201ENST00000270361 WDR7Q9Y4E6 1490 aa27.88■■■□□ 2.05
CAPN10-201ENST00000270361 ADAMTS8Q9UP79 889 aa27.87■■■□□ 2.05
CAPN10-201ENST00000270361 WDR43Q15061 677 aaKnown RBP eCLIP27.86■■■□□ 2.05
CAPN10-201ENST00000270361 SHROOM2Q13796 1616 aa27.86■■■□□ 2.05
CAPN10-201ENST00000270361 PLCH2O75038 1416 aa27.86■■■□□ 2.05
CAPN10-201ENST00000270361 EFCAB2Q5VUJ9 269 aa27.85■■■□□ 2.05
CAPN10-201ENST00000270361 PPP2R1AP30153 589 aa27.84■■■□□ 2.05
CAPN10-201ENST00000270361 DDRGK1Q96HY6 314 aa27.83■■■□□ 2.05
CAPN10-201ENST00000270361 MADDQ8WXG6 1647 aa27.82■■■□□ 2.04
CAPN10-201ENST00000270361 PPM1GO15355 546 aaPredicted RBP27.81■■■□□ 2.04
CAPN10-201ENST00000270361 SCAPERQ9BY12 1400 aa27.81■■■□□ 2.04
CAPN10-201ENST00000270361 SYNMO15061 1565 aa27.81■■■□□ 2.04
CAPN10-201ENST00000270361 IQGAP1P46940 1657 aa27.81■■■□□ 2.04
CAPN10-201ENST00000270361 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.8■■■□□ 2.04
CAPN10-201ENST00000270361 SCAF11Q99590 1463 aaKnown RBP27.8■■■□□ 2.04
CAPN10-201ENST00000270361 AMER1Q5JTC6 1135 aaPredicted RBP27.8■■■□□ 2.04
CAPN10-201ENST00000270361 NPC1L1Q9UHC9 1359 aa27.79■■■□□ 2.04
CAPN10-201ENST00000270361 TRPM2O94759 1503 aa27.78■■■□□ 2.04
CAPN10-201ENST00000270361 PIK3C2GO75747 1445 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms