RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 ROCK2O75116 1388 aaKnown RBP16.28■□□□□ 0.2
SLC6A3-201ENST00000270349 USP47Q96K76 1375 aa16.27■□□□□ 0.2
SLC6A3-201ENST00000270349 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.2
SLC6A3-201ENST00000270349 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.19
SLC6A3-201ENST00000270349 MAST1Q9Y2H9 1570 aa16.25■□□□□ 0.19
SLC6A3-201ENST00000270349 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
SLC6A3-201ENST00000270349 WASHC2CQ9Y4E1 1318 aa16.24■□□□□ 0.19
SLC6A3-201ENST00000270349 ATP7AQ04656 1500 aa16.23■□□□□ 0.19
SLC6A3-201ENST00000270349 ARAP3Q8WWN8 1544 aa16.23■□□□□ 0.19
SLC6A3-201ENST00000270349 ABCA9Q8IUA7 1624 aa16.23■□□□□ 0.19
SLC6A3-201ENST00000270349 PLXNC1O60486 1568 aa16.22■□□□□ 0.19
SLC6A3-201ENST00000270349 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
SLC6A3-201ENST00000270349 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
SLC6A3-201ENST00000270349 ST20-MTHFSA0A0A6YYL1 179 aa16.22■□□□□ 0.19
SLC6A3-201ENST00000270349 CCDC7Q96M83 1385 aa16.21■□□□□ 0.19
SLC6A3-201ENST00000270349 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
SLC6A3-201ENST00000270349 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
SLC6A3-201ENST00000270349 C11orf95C9JLR9 678 aaPredicted RBP16.19■□□□□ 0.18
SLC6A3-201ENST00000270349 CCER2I3L3R5 266 aa16.19■□□□□ 0.18
SLC6A3-201ENST00000270349 ZFYVE16Q7Z3T8 1539 aa16.18■□□□□ 0.18
SLC6A3-201ENST00000270349 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
SLC6A3-201ENST00000270349 NBPF1Q3BBV0 1214 aa16.16■□□□□ 0.18
SLC6A3-201ENST00000270349 MLECQ14165 292 aa16.16■□□□□ 0.18
SLC6A3-201ENST00000270349 ESF1Q9H501 851 aaKnown RBP16.16■□□□□ 0.18
SLC6A3-201ENST00000270349 MRS2Q9HD23 443 aa16.16■□□□□ 0.18
SLC6A3-201ENST00000270349 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
SLC6A3-201ENST00000270349 A2MP01023 1474 aa16.15■□□□□ 0.18
SLC6A3-201ENST00000270349 MYT1Q01538 1121 aa16.15■□□□□ 0.18
SLC6A3-201ENST00000270349 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
SLC6A3-201ENST00000270349 UNC13BO14795 1591 aa16.14■□□□□ 0.17
SLC6A3-201ENST00000270349 HNRNPUQ00839 825 aaKnown RBP eCLIP16.13■□□□□ 0.17
SLC6A3-201ENST00000270349 CNTLNQ9NXG0 1405 aa16.13■□□□□ 0.17
SLC6A3-201ENST00000270349 POGZQ7Z3K3 1410 aa16.13■□□□□ 0.17
SLC6A3-201ENST00000270349 CFAP74Q9C0B2 1584 aa16.11■□□□□ 0.17
SLC6A3-201ENST00000270349 IQGAP3Q86VI3 1631 aa16.11■□□□□ 0.17
SLC6A3-201ENST00000270349 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
SLC6A3-201ENST00000270349 ARID4BQ4LE39 1312 aaPredicted RBP16.09■□□□□ 0.17
SLC6A3-201ENST00000270349 NEFLP07196 543 aa16.09■□□□□ 0.17
SLC6A3-201ENST00000270349 PLA2R1Q13018 1463 aa16.09■□□□□ 0.17
SLC6A3-201ENST00000270349 TMF1P82094 1093 aa16.09■□□□□ 0.17
SLC6A3-201ENST00000270349 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
SLC6A3-201ENST00000270349 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
SLC6A3-201ENST00000270349 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
SLC6A3-201ENST00000270349 NEO1Q92859 1461 aa16.09■□□□□ 0.17
SLC6A3-201ENST00000270349 UHRF1BP1Q6BDS2 1440 aa16.08■□□□□ 0.16
SLC6A3-201ENST00000270349 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
SLC6A3-201ENST00000270349 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
SLC6A3-201ENST00000270349 PRAG1Q86YV5 1406 aa16.07■□□□□ 0.16
SLC6A3-201ENST00000270349 INO80Q9ULG1 1556 aaPredicted RBP16.06■□□□□ 0.16
SLC6A3-201ENST00000270349 CFAP65Q6ZU64 1925 aaKnown RBP16.05■□□□□ 0.16
SLC6A3-201ENST00000270349 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
SLC6A3-201ENST00000270349 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
SLC6A3-201ENST00000270349 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
SLC6A3-201ENST00000270349 STAC3Q96MF2 364 aa16.03■□□□□ 0.16
SLC6A3-201ENST00000270349 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
SLC6A3-201ENST00000270349 SPATA31E1Q6ZUB1 1445 aa16.03■□□□□ 0.16
SLC6A3-201ENST00000270349 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
SLC6A3-201ENST00000270349 MLH3Q9UHC1 1453 aa16.03■□□□□ 0.16
SLC6A3-201ENST00000270349 ATP10AO60312 1499 aa16.02■□□□□ 0.16
SLC6A3-201ENST00000270349 HECW2Q9P2P5 1572 aa16.02■□□□□ 0.16
SLC6A3-201ENST00000270349 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.15
SLC6A3-201ENST00000270349 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
SLC6A3-201ENST00000270349 KIDINS220Q9ULH0 1771 aa16■□□□□ 0.15
SLC6A3-201ENST00000270349 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
SLC6A3-201ENST00000270349 BCANQ96GW7 911 aa15.99■□□□□ 0.15
SLC6A3-201ENST00000270349 YEATS2Q9ULM3 1422 aa15.99■□□□□ 0.15
SLC6A3-201ENST00000270349 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
SLC6A3-201ENST00000270349 TET3O43151 1660 aa15.98■□□□□ 0.15
SLC6A3-201ENST00000270349 E9PCH4 1651 aa15.98■□□□□ 0.15
SLC6A3-201ENST00000270349 ADGRF5Q8IZF2 1346 aa15.97■□□□□ 0.15
SLC6A3-201ENST00000270349 TRPM2O94759 1503 aa15.97■□□□□ 0.15
SLC6A3-201ENST00000270349 SENP3-EIF4A1A0A087X0R7 540 aa15.97■□□□□ 0.15
SLC6A3-201ENST00000270349 TRAK1Q9UPV9 953 aa15.97■□□□□ 0.15
SLC6A3-201ENST00000270349 KNSTRNQ9Y448 316 aa15.96■□□□□ 0.15
SLC6A3-201ENST00000270349 KDM5CP41229 1560 aa15.96■□□□□ 0.14
SLC6A3-201ENST00000270349 CCDC184Q52MB2 194 aa15.95■□□□□ 0.14
SLC6A3-201ENST00000270349 EIF2AK4Q9P2K8 1649 aaKnown RBP15.95■□□□□ 0.14
SLC6A3-201ENST00000270349 UGGT1Q9NYU2 1555 aa15.95■□□□□ 0.14
SLC6A3-201ENST00000270349 PTPRTO14522 1441 aa15.95■□□□□ 0.14
SLC6A3-201ENST00000270349 PANK3Q9H999 370 aa15.95■□□□□ 0.14
SLC6A3-201ENST00000270349 VGFO15240 615 aaPredicted RBP15.94■□□□□ 0.14
SLC6A3-201ENST00000270349 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
SLC6A3-201ENST00000270349 SPHKAPQ2M3C7 1700 aa15.94■□□□□ 0.14
SLC6A3-201ENST00000270349 KTN1Q86UP2 1357 aaKnown RBP15.93■□□□□ 0.14
SLC6A3-201ENST00000270349 NPATQ14207 1427 aa15.93■□□□□ 0.14
SLC6A3-201ENST00000270349 STK26Q9P289 416 aa15.93■□□□□ 0.14
SLC6A3-201ENST00000270349 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
SLC6A3-201ENST00000270349 TMEM132EQ6IEE7 984 aa15.93■□□□□ 0.14
SLC6A3-201ENST00000270349 CLTCL1P53675 1640 aa15.92■□□□□ 0.14
SLC6A3-201ENST00000270349 NOS1P29475 1434 aa15.92■□□□□ 0.14
SLC6A3-201ENST00000270349 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
SLC6A3-201ENST00000270349 EFCAB6Q5THR3 1501 aa15.92■□□□□ 0.14
SLC6A3-201ENST00000270349 IDI1Q13907 227 aa15.91■□□□□ 0.14
SLC6A3-201ENST00000270349 RALBP1Q15311 655 aa15.91■□□□□ 0.14
SLC6A3-201ENST00000270349 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
SLC6A3-201ENST00000270349 SLC52A1Q9NWF4 448 aa15.91■□□□□ 0.14
SLC6A3-201ENST00000270349 ABCA6Q8N139 1617 aa15.91■□□□□ 0.14
SLC6A3-201ENST00000270349 CEP152O94986 1710 aa15.91■□□□□ 0.14
SLC6A3-201ENST00000270349 DEPDC5O75140 1603 aa15.9■□□□□ 0.14
SLC6A3-201ENST00000270349 FKBP8Q14318 412 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms