RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 BRD4O60885 1362 aaPredicted RBP22.85■■□□□ 1.25
SPG7-201ENST00000268704 PLEKHD1A6NEE1 506 aa22.83■■□□□ 1.25
SPG7-201ENST00000268704 E9PCH4 1651 aa22.83■■□□□ 1.25
SPG7-201ENST00000268704 NPM2Q86SE8 214 aaKnown RBP22.83■■□□□ 1.24
SPG7-201ENST00000268704 TSPY4P0CV99 314 aa22.82■■□□□ 1.24
SPG7-201ENST00000268704 TSPY10P0CW01 314 aa22.82■■□□□ 1.24
SPG7-201ENST00000268704 JPH4Q96JJ6 628 aa22.82■■□□□ 1.24
SPG7-201ENST00000268704 MYT1LQ9UL68 1186 aa22.82■■□□□ 1.24
SPG7-201ENST00000268704 RALBP1Q15311 655 aa22.82■■□□□ 1.24
SPG7-201ENST00000268704 RCAN3Q9UKA8 241 aa22.81■■□□□ 1.24
SPG7-201ENST00000268704 ABCC10Q5T3U5 1492 aa22.81■■□□□ 1.24
SPG7-201ENST00000268704 RGL3Q3MIN7 710 aa22.8■■□□□ 1.24
SPG7-201ENST00000268704 CDCA7LQ96GN5 454 aa22.8■■□□□ 1.24
SPG7-201ENST00000268704 ZBTB47Q9UFB7 747 aaPredicted RBP22.8■■□□□ 1.24
SPG7-201ENST00000268704 NBPF1Q3BBV0 1214 aa22.79■■□□□ 1.24
SPG7-201ENST00000268704 SHANK2Q9UPX8 1470 aa22.79■■□□□ 1.24
SPG7-201ENST00000268704 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
SPG7-201ENST00000268704 CARMIL2Q6F5E8 1435 aa22.78■■□□□ 1.24
SPG7-201ENST00000268704 ATP10BO94823 1461 aa22.77■■□□□ 1.24
SPG7-201ENST00000268704 KDM5DQ9BY66 1539 aa22.77■■□□□ 1.24
SPG7-201ENST00000268704 RTN4Q9NQC3 1192 aaKnown RBP22.77■■□□□ 1.24
SPG7-201ENST00000268704 SYNJ2O15056 1496 aa22.76■■□□□ 1.23
SPG7-201ENST00000268704 CC2D1BQ5T0F9 858 aaKnown RBP22.76■■□□□ 1.23
SPG7-201ENST00000268704 NLRP13Q86W25 1043 aa22.76■■□□□ 1.23
SPG7-201ENST00000268704 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
SPG7-201ENST00000268704 PLIN1O60240 522 aa22.74■■□□□ 1.23
SPG7-201ENST00000268704 PTPRGP23470 1445 aa22.74■■□□□ 1.23
SPG7-201ENST00000268704 ABCA8O94911 1581 aa22.74■■□□□ 1.23
SPG7-201ENST00000268704 SKAP1Q86WV1 359 aa22.74■■□□□ 1.23
SPG7-201ENST00000268704 PARD3Q8TEW0 1356 aa22.73■■□□□ 1.23
SPG7-201ENST00000268704 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
SPG7-201ENST00000268704 TRPM1Q7Z4N2 1603 aa22.72■■□□□ 1.23
SPG7-201ENST00000268704 PRAG1Q86YV5 1406 aa22.72■■□□□ 1.23
SPG7-201ENST00000268704 PER1O15534 1290 aaPredicted RBP22.71■■□□□ 1.23
SPG7-201ENST00000268704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.71■■□□□ 1.233e-7■■■□□ 17.8
SPG7-201ENST00000268704 CCDC144AA2RUR9 1427 aa22.69■■□□□ 1.22
SPG7-201ENST00000268704 DISP3Q9P2K9 1392 aa22.69■■□□□ 1.22
SPG7-201ENST00000268704 PDE4AP27815 886 aa22.68■■□□□ 1.22
SPG7-201ENST00000268704 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
SPG7-201ENST00000268704 NUP160Q12769 1436 aa22.67■■□□□ 1.22
SPG7-201ENST00000268704 SAMD9LQ8IVG5 1584 aa22.66■■□□□ 1.22
SPG7-201ENST00000268704 TCERG1O14776 1098 aaKnown RBP22.65■■□□□ 1.22
SPG7-201ENST00000268704 LAS1LQ9Y4W2 734 aaKnown RBP22.65■■□□□ 1.22
SPG7-201ENST00000268704 PANK3Q9H999 370 aa22.63■■□□□ 1.21
SPG7-201ENST00000268704 A2MP01023 1474 aa22.63■■□□□ 1.21
SPG7-201ENST00000268704 ARHGEF5Q12774 1597 aa22.63■■□□□ 1.21
SPG7-201ENST00000268704 PLA2R1Q13018 1463 aa22.63■■□□□ 1.21
SPG7-201ENST00000268704 CCDC141Q6ZP82 1450 aa22.63■■□□□ 1.21
SPG7-201ENST00000268704 CHD1O14646 1710 aa22.62■■□□□ 1.21
SPG7-201ENST00000268704 CDC42BPBQ9Y5S2 1711 aa22.62■■□□□ 1.21
SPG7-201ENST00000268704 TESK2Q96S53 571 aa22.62■■□□□ 1.21
SPG7-201ENST00000268704 PDE3BQ13370 1112 aa22.62■■□□□ 1.21
SPG7-201ENST00000268704 COL17A1Q9UMD9 1497 aaPredicted RBP22.62■■□□□ 1.21
SPG7-201ENST00000268704 CRBNQ96SW2 442 aa22.61■■□□□ 1.21
SPG7-201ENST00000268704 BACH2Q9BYV9 841 aa22.61■■□□□ 1.21
SPG7-201ENST00000268704 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.61■■□□□ 1.21
SPG7-201ENST00000268704 SYCP2Q9BX26 1530 aa22.58■■□□□ 1.21
SPG7-201ENST00000268704 C20orf194Q5TEA3 1177 aa22.58■■□□□ 1.2
SPG7-201ENST00000268704 OSCARQ8IYS5 282 aa22.58■■□□□ 1.2
SPG7-201ENST00000268704 IL27Q8NEV9 243 aa22.58■■□□□ 1.2
SPG7-201ENST00000268704 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
SPG7-201ENST00000268704 BLMP54132 1417 aaPredicted RBP22.56■■□□□ 1.2
SPG7-201ENST00000268704 GPRASP1Q5JY77 1395 aa22.56■■□□□ 1.2
SPG7-201ENST00000268704 PRDM15P57071 1507 aaPredicted RBP22.56■■□□□ 1.2
SPG7-201ENST00000268704 ERBINQ96RT1 1412 aa22.56■■□□□ 1.2
SPG7-201ENST00000268704 PREX2Q70Z35 1606 aa22.56■■□□□ 1.2
SPG7-201ENST00000268704 ADAMTS8Q9UP79 889 aa22.52■■□□□ 1.2
SPG7-201ENST00000268704 PLEKHH2Q8IVE3 1493 aa22.52■■□□□ 1.19
SPG7-201ENST00000268704 NEFMP07197 916 aa22.51■■□□□ 1.19
SPG7-201ENST00000268704 MS4A1P11836 297 aa22.51■■□□□ 1.19
SPG7-201ENST00000268704 UNC13BO14795 1591 aa22.5■■□□□ 1.19
SPG7-201ENST00000268704 TMF1P82094 1093 aa22.5■■□□□ 1.19
SPG7-201ENST00000268704 ARHGAP5Q13017 1502 aa22.49■■□□□ 1.19
SPG7-201ENST00000268704 TTC37Q6PGP7 1564 aa22.49■■□□□ 1.19
SPG7-201ENST00000268704 ZMYM4Q5VZL5 1548 aa22.48■■□□□ 1.19
SPG7-201ENST00000268704 WASHC2CQ9Y4E1 1318 aa22.47■■□□□ 1.19
SPG7-201ENST00000268704 LAMC1P11047 1609 aa22.46■■□□□ 1.19
SPG7-201ENST00000268704 PLEKHH1Q9ULM0 1364 aa22.46■■□□□ 1.19
SPG7-201ENST00000268704 MAGI2Q86UL8 1455 aa22.45■■□□□ 1.18
SPG7-201ENST00000268704 RSPH4AQ5TD94 716 aa22.44■■□□□ 1.18
SPG7-201ENST00000268704 IQGAP3Q86VI3 1631 aa22.43■■□□□ 1.18
SPG7-201ENST00000268704 SLC4A3P48751 1232 aa22.43■■□□□ 1.18
SPG7-201ENST00000268704 EIF2AK4Q9P2K8 1649 aaKnown RBP22.42■■□□□ 1.18
SPG7-201ENST00000268704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.18
SPG7-201ENST00000268704 PPP2R1AP30153 589 aa22.41■■□□□ 1.18
SPG7-201ENST00000268704 WDR7Q9Y4E6 1490 aa22.4■■□□□ 1.18
SPG7-201ENST00000268704 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.18
SPG7-201ENST00000268704 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.18
SPG7-201ENST00000268704 KNSTRNQ9Y448 316 aa22.39■■□□□ 1.18
SPG7-201ENST00000268704 MAST1Q9Y2H9 1570 aa22.39■■□□□ 1.17
SPG7-201ENST00000268704 KDM2BQ8NHM5 1336 aa22.39■■□□□ 1.17
SPG7-201ENST00000268704 INSRP06213 1382 aa22.38■■□□□ 1.17
SPG7-201ENST00000268704 RNF17Q9BXT8 1623 aaKnown RBP22.38■■□□□ 1.17
SPG7-201ENST00000268704 CCDC146Q8IYE0 955 aa22.37■■□□□ 1.17
SPG7-201ENST00000268704 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
SPG7-201ENST00000268704 PLXNC1O60486 1568 aa22.35■■□□□ 1.17
SPG7-201ENST00000268704 AMER1Q5JTC6 1135 aaPredicted RBP22.35■■□□□ 1.17
SPG7-201ENST00000268704 GOLGA2Q08379 1002 aa22.32■■□□□ 1.16
SPG7-201ENST00000268704 DUOX2Q9NRD8 1548 aa22.32■■□□□ 1.16
SPG7-201ENST00000268704 PPM1GO15355 546 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms