RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 U2SURPO15042 1029 aaKnown RBP16.48■□□□□ 0.23
HERC6-201ENST00000264346 POGKQ9P215 609 aa16.48■□□□□ 0.23
HERC6-201ENST00000264346 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
HERC6-201ENST00000264346 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
HERC6-201ENST00000264346 NCOA1Q15788 1441 aa16.46■□□□□ 0.23
HERC6-201ENST00000264346 ARHGAP5Q13017 1502 aa16.46■□□□□ 0.23
HERC6-201ENST00000264346 SRPK2P78362 688 aaKnown RBP16.46■□□□□ 0.23
HERC6-201ENST00000264346 MORC1Q86VD1 984 aa16.46■□□□□ 0.22
HERC6-201ENST00000264346 UGGT2Q9NYU1 1516 aa16.45■□□□□ 0.22
HERC6-201ENST00000264346 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
HERC6-201ENST00000264346 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
HERC6-201ENST00000264346 CFAP43Q8NDM7 1665 aa16.44■□□□□ 0.22
HERC6-201ENST00000264346 CDCA7LQ96GN5 454 aa16.44■□□□□ 0.22
HERC6-201ENST00000264346 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
HERC6-201ENST00000264346 WASHC2CQ9Y4E1 1318 aa16.44■□□□□ 0.22
HERC6-201ENST00000264346 ARID4BQ4LE39 1312 aaPredicted RBP16.44■□□□□ 0.22
HERC6-201ENST00000264346 ROCK1Q13464 1354 aa16.42■□□□□ 0.22
HERC6-201ENST00000264346 RRP7AQ9Y3A4 280 aaKnown RBP16.42■□□□□ 0.22
HERC6-201ENST00000264346 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
HERC6-201ENST00000264346 MAGI3Q5TCQ9 1506 aa16.41■□□□□ 0.22
HERC6-201ENST00000264346 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
HERC6-201ENST00000264346 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
HERC6-201ENST00000264346 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
HERC6-201ENST00000264346 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
HERC6-201ENST00000264346 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
HERC6-201ENST00000264346 SOX12O15370 315 aa16.39■□□□□ 0.22
HERC6-201ENST00000264346 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.22
HERC6-201ENST00000264346 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
HERC6-201ENST00000264346 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
HERC6-201ENST00000264346 RPRD2Q5VT52 1461 aaKnown RBP16.37■□□□□ 0.21
HERC6-201ENST00000264346 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
HERC6-201ENST00000264346 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
HERC6-201ENST00000264346 U2AF1L5P0DN76 240 aaPredicted RBP16.36■□□□□ 0.21
HERC6-201ENST00000264346 U2AF1Q01081 240 aaKnown RBP eCLIP16.36■□□□□ 0.21
HERC6-201ENST00000264346 ERICH6BQ5W0A0 696 aa16.36■□□□□ 0.21
HERC6-201ENST00000264346 APAF1O14727 1248 aa16.35■□□□□ 0.21
HERC6-201ENST00000264346 ARXQ96QS3 562 aa16.35■□□□□ 0.21
HERC6-201ENST00000264346 ADAMTS8Q9UP79 889 aa16.34■□□□□ 0.21
HERC6-201ENST00000264346 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
HERC6-201ENST00000264346 RRP1P56182 461 aaKnown RBP16.34■□□□□ 0.21
HERC6-201ENST00000264346 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
HERC6-201ENST00000264346 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
HERC6-201ENST00000264346 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
HERC6-201ENST00000264346 GOLGA2Q08379 1002 aa16.33■□□□□ 0.21
HERC6-201ENST00000264346 ATP10BO94823 1461 aa16.33■□□□□ 0.2
HERC6-201ENST00000264346 SCAPERQ9BY12 1400 aa16.32■□□□□ 0.2
HERC6-201ENST00000264346 CRBNQ96SW2 442 aa16.32■□□□□ 0.2
HERC6-201ENST00000264346 WDR62O43379 1518 aa16.32■□□□□ 0.2
HERC6-201ENST00000264346 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
HERC6-201ENST00000264346 MAPK8IP3Q9UPT6 1336 aa16.31■□□□□ 0.2
HERC6-201ENST00000264346 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
HERC6-201ENST00000264346 RAPGEF6Q8TEU7 1601 aa16.31■□□□□ 0.2
HERC6-201ENST00000264346 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
HERC6-201ENST00000264346 FTSJ3Q8IY81 847 aaKnown RBP16.3■□□□□ 0.2
HERC6-201ENST00000264346 ZBTB7CA1YPR0 619 aa16.3■□□□□ 0.2
HERC6-201ENST00000264346 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
HERC6-201ENST00000264346 SAMD9Q5K651 1589 aa16.28■□□□□ 0.2
HERC6-201ENST00000264346 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
HERC6-201ENST00000264346 RAPGEF3O95398 923 aa16.27■□□□□ 0.2
HERC6-201ENST00000264346 UPF2Q9HAU5 1272 aaKnown RBP16.27■□□□□ 0.2
HERC6-201ENST00000264346 PLEKHH2Q8IVE3 1493 aa16.27■□□□□ 0.2
HERC6-201ENST00000264346 MINK1Q8N4C8 1332 aaPredicted RBP16.27■□□□□ 0.19
HERC6-201ENST00000264346 KDM6BO15054 1643 aa16.26■□□□□ 0.19
HERC6-201ENST00000264346 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
HERC6-201ENST00000264346 PDE3BQ13370 1112 aa16.26■□□□□ 0.19
HERC6-201ENST00000264346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.26■□□□□ 0.19
HERC6-201ENST00000264346 CCDC141Q6ZP82 1450 aa16.26■□□□□ 0.19
HERC6-201ENST00000264346 TCOF1Q13428 1488 aaKnown RBP16.25■□□□□ 0.19
HERC6-201ENST00000264346 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
HERC6-201ENST00000264346 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
HERC6-201ENST00000264346 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
HERC6-201ENST00000264346 FANCIQ9NVI1 1328 aa16.24■□□□□ 0.19
HERC6-201ENST00000264346 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
HERC6-201ENST00000264346 BRD4O60885 1362 aaPredicted RBP16.23■□□□□ 0.19
HERC6-201ENST00000264346 SLC12A5Q9H2X9 1139 aa16.23■□□□□ 0.19
HERC6-201ENST00000264346 KIF14Q15058 1648 aa16.23■□□□□ 0.19
HERC6-201ENST00000264346 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
HERC6-201ENST00000264346 SLC4A3P48751 1232 aa16.22■□□□□ 0.19
HERC6-201ENST00000264346 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
HERC6-201ENST00000264346 CENPJQ9HC77 1338 aaPredicted RBP16.2■□□□□ 0.18
HERC6-201ENST00000264346 HSP90AA1P07900 732 aaKnown RBP16.2■□□□□ 0.18
HERC6-201ENST00000264346 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
HERC6-201ENST00000264346 TCERG1O14776 1098 aaKnown RBP16.18■□□□□ 0.18
HERC6-201ENST00000264346 PDE4AP27815 886 aa16.18■□□□□ 0.18
HERC6-201ENST00000264346 PZPP20742 1482 aa16.18■□□□□ 0.18
HERC6-201ENST00000264346 SPRYD3Q8NCJ5 442 aa16.17■□□□□ 0.18
HERC6-201ENST00000264346 GGNBP2Q9H3C7 697 aa16.17■□□□□ 0.18
HERC6-201ENST00000264346 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
HERC6-201ENST00000264346 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
HERC6-201ENST00000264346 DISP3Q9P2K9 1392 aa16.16■□□□□ 0.18
HERC6-201ENST00000264346 IPO9Q96P70 1041 aaKnown RBP16.16■□□□□ 0.18
HERC6-201ENST00000264346 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
HERC6-201ENST00000264346 HDGFL2Q7Z4V5 671 aaPredicted RBP16.15■□□□□ 0.18
HERC6-201ENST00000264346 FAM69CQ0P6D2 419 aa16.15■□□□□ 0.18
HERC6-201ENST00000264346 ADGRF5Q8IZF2 1346 aa16.14■□□□□ 0.17
HERC6-201ENST00000264346 MTHFSP49914 203 aa16.14■□□□□ 0.17
HERC6-201ENST00000264346 DDRGK1Q96HY6 314 aa16.14■□□□□ 0.17
HERC6-201ENST00000264346 SYCP2Q9BX26 1530 aa16.13■□□□□ 0.17
HERC6-201ENST00000264346 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
HERC6-201ENST00000264346 BCAR3O75815 825 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms