RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 ZNF771Q7L3S4 317 aaPredicted RBP18.69■□□□□ 0.58
NID1-201ENST00000264187 USP35Q9P2H5 1018 aa18.69■□□□□ 0.58
NID1-201ENST00000264187 NUTM2FA1L443 756 aa18.69■□□□□ 0.58
NID1-201ENST00000264187 GOLGA6L19H0YKK7 550 aa18.69■□□□□ 0.58
NID1-201ENST00000264187 BECN2A8MW95 431 aa18.68■□□□□ 0.58
NID1-201ENST00000264187 MCTP1Q6DN14 999 aa18.68■□□□□ 0.58
NID1-201ENST00000264187 FAM184AQ8NB25 1140 aa18.67■□□□□ 0.58
NID1-201ENST00000264187 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
NID1-201ENST00000264187 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
NID1-201ENST00000264187 RRP7AQ9Y3A4 280 aaKnown RBP18.67■□□□□ 0.58
NID1-201ENST00000264187 BCL11BQ9C0K0 894 aaPredicted RBP18.66■□□□□ 0.58
NID1-201ENST00000264187 CENPJQ9HC77 1338 aaPredicted RBP18.65■□□□□ 0.58
NID1-201ENST00000264187 PCMTD1Q96MG8 357 aaPredicted RBP18.65■□□□□ 0.58
NID1-201ENST00000264187 BCL2L13Q9BXK5 485 aa18.65■□□□□ 0.58
NID1-201ENST00000264187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.57
NID1-201ENST00000264187 KIF3AQ9Y496 699 aa18.63■□□□□ 0.57
NID1-201ENST00000264187 RALBP1Q15311 655 aa18.63■□□□□ 0.57
NID1-201ENST00000264187 DDX11L8A8MPP1 907 aa18.62■□□□□ 0.57
NID1-201ENST00000264187 FBXW7Q969H0 707 aa18.62■□□□□ 0.57
NID1-201ENST00000264187 AKAP17AQ02040 695 aaKnown RBP18.62■□□□□ 0.57
NID1-201ENST00000264187 ANKRD45Q5TZF3 282 aa18.61■□□□□ 0.57
NID1-201ENST00000264187 AMPHP49418 695 aa18.61■□□□□ 0.57
NID1-201ENST00000264187 TPM1P09493 284 aa18.61■□□□□ 0.57
NID1-201ENST00000264187 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
NID1-201ENST00000264187 TPM2P07951 284 aa18.59■□□□□ 0.57
NID1-201ENST00000264187 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
NID1-201ENST00000264187 PLIN1O60240 522 aa18.59■□□□□ 0.57
NID1-201ENST00000264187 GPS2Q13227 327 aa18.59■□□□□ 0.57
NID1-201ENST00000264187 CCDC70Q6NSX1 233 aa18.59■□□□□ 0.57
NID1-201ENST00000264187 NGEFQ8N5V2 710 aa18.59■□□□□ 0.57
NID1-201ENST00000264187 NGDNQ8NEJ9 315 aaKnown RBP18.59■□□□□ 0.57
NID1-201ENST00000264187 FAM13BQ9NYF5 915 aa18.59■□□□□ 0.57
NID1-201ENST00000264187 CALRP27797 417 aaKnown RBP18.57■□□□□ 0.56
NID1-201ENST00000264187 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
NID1-201ENST00000264187 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
NID1-201ENST00000264187 TCEAL9Q9UHQ7 104 aa18.56■□□□□ 0.56
NID1-201ENST00000264187 CHMP4AQ9BY43 222 aa18.56■□□□□ 0.56
NID1-201ENST00000264187 EEA1Q15075 1411 aa18.56■□□□□ 0.56
NID1-201ENST00000264187 HOMER1Q86YM7 354 aa18.56■□□□□ 0.56
NID1-201ENST00000264187 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
NID1-201ENST00000264187 KRI1Q8N9T8 703 aaKnown RBP18.55■□□□□ 0.56
NID1-201ENST00000264187 GSE1Q14687 1217 aa18.54■□□□□ 0.56
NID1-201ENST00000264187 TNIKQ9UKE5 1360 aa18.54■□□□□ 0.56
NID1-201ENST00000264187 WRNQ14191 1432 aaPredicted RBP eCLIP18.54■□□□□ 0.56
NID1-201ENST00000264187 FOSBP53539 338 aa18.54■□□□□ 0.56
NID1-201ENST00000264187 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
NID1-201ENST00000264187 RRP12Q5JTH9 1297 aaKnown RBP18.53■□□□□ 0.56
NID1-201ENST00000264187 SYNE3Q6ZMZ3 975 aa18.53■□□□□ 0.56
NID1-201ENST00000264187 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
NID1-201ENST00000264187 DHX16O60231 1041 aaKnown RBP18.53■□□□□ 0.56
NID1-201ENST00000264187 IPO7O95373 1038 aaKnown RBP18.53■□□□□ 0.56
NID1-201ENST00000264187 TERF2IPQ9NYB0 399 aa18.53■□□□□ 0.56
NID1-201ENST00000264187 MSH5O43196 834 aa18.52■□□□□ 0.56
NID1-201ENST00000264187 ATP6V1DQ9Y5K8 247 aa18.51■□□□□ 0.55
NID1-201ENST00000264187 APPP05067 770 aa18.51■□□□□ 0.55
NID1-201ENST00000264187 PDE4AP27815 886 aa18.51■□□□□ 0.55
NID1-201ENST00000264187 DIAPH3Q9NSV4 1193 aa18.51■□□□□ 0.55
NID1-201ENST00000264187 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
NID1-201ENST00000264187 SAMD1Q6SPF0 538 aaPredicted RBP18.51■□□□□ 0.55
NID1-201ENST00000264187 NECTIN2Q92692 538 aa18.5■□□□□ 0.55
NID1-201ENST00000264187 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
NID1-201ENST00000264187 BICD2Q8TD16 824 aa18.49■□□□□ 0.55
NID1-201ENST00000264187 NAP1L1P55209 391 aaKnown RBP18.49■□□□□ 0.55
NID1-201ENST00000264187 TRIM29Q14134 588 aa18.49■□□□□ 0.55
NID1-201ENST00000264187 MPHOSPH9Q99550 1183 aa18.49■□□□□ 0.55
NID1-201ENST00000264187 LMOD3Q0VAK6 560 aa18.49■□□□□ 0.55
NID1-201ENST00000264187 ANO2Q9NQ90 1003 aa18.49■□□□□ 0.55
NID1-201ENST00000264187 NUP155O75694 1391 aa18.48■□□□□ 0.55
NID1-201ENST00000264187 CTDP1Q9Y5B0 961 aaPredicted RBP18.48■□□□□ 0.55
NID1-201ENST00000264187 EIF2S2P20042 333 aaKnown RBP18.48■□□□□ 0.55
NID1-201ENST00000264187 FAM161AQ3B820 660 aa18.48■□□□□ 0.55
NID1-201ENST00000264187 TRIM34Q9BYJ4 488 aa18.47■□□□□ 0.55
NID1-201ENST00000264187 SKOR2Q2VWA4 1001 aaPredicted RBP18.47■□□□□ 0.55
NID1-201ENST00000264187 COG6Q9Y2V7 657 aa18.47■□□□□ 0.55
NID1-201ENST00000264187 EXOC6Q8TAG9 804 aa18.47■□□□□ 0.55
NID1-201ENST00000264187 CPLX1O14810 134 aa18.46■□□□□ 0.55
NID1-201ENST00000264187 TEX35Q5T0J7 233 aa18.46■□□□□ 0.55
NID1-201ENST00000264187 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.54
NID1-201ENST00000264187 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
NID1-201ENST00000264187 NLRP13Q86W25 1043 aa18.45■□□□□ 0.54
NID1-201ENST00000264187 VPS37CA5D8V6 355 aaPredicted RBP18.44■□□□□ 0.54
NID1-201ENST00000264187 ANKRD20A12PQ8NF67 263 aa18.44■□□□□ 0.54
NID1-201ENST00000264187 CRBNQ96SW2 442 aa18.44■□□□□ 0.54
NID1-201ENST00000264187 CPLX2Q6PUV4 134 aaKnown RBP18.44■□□□□ 0.54
NID1-201ENST00000264187 RUFY1Q96T51 708 aa18.44■□□□□ 0.54
NID1-201ENST00000264187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.43■□□□□ 0.54
NID1-201ENST00000264187 CENPQQ7L2Z9 268 aaPredicted RBP18.43■□□□□ 0.54
NID1-201ENST00000264187 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
NID1-201ENST00000264187 KIF3BO15066 747 aa18.43■□□□□ 0.54
NID1-201ENST00000264187 CCDC47Q96A33 483 aaKnown RBP18.43■□□□□ 0.54
NID1-201ENST00000264187 NOL10Q9BSC4 688 aaKnown RBP18.42■□□□□ 0.54
NID1-201ENST00000264187 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
NID1-201ENST00000264187 IFT57Q9NWB7 429 aa18.42■□□□□ 0.54
NID1-201ENST00000264187 KDM4AO75164 1064 aa18.42■□□□□ 0.54
NID1-201ENST00000264187 SKIDA1Q1XH10 827 aa18.42■□□□□ 0.54
NID1-201ENST00000264187 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
NID1-201ENST00000264187 C9orf78Q9NZ63 289 aaPredicted RBP18.41■□□□□ 0.54
NID1-201ENST00000264187 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
NID1-201ENST00000264187 CT47A1Q5JQC4 288 aaPredicted RBP18.41■□□□□ 0.54
NID1-201ENST00000264187 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms