RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 RASSF8Q8NHQ8 419 aa16.06■□□□□ 0.16
TTC39A-202ENST00000262676 TPM3P06753 285 aa16.06■□□□□ 0.16
TTC39A-202ENST00000262676 ZNF771Q7L3S4 317 aaPredicted RBP16.06■□□□□ 0.16
TTC39A-202ENST00000262676 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
TTC39A-202ENST00000262676 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
TTC39A-202ENST00000262676 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-202ENST00000262676 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-202ENST00000262676 FOXD4L5Q5VV16 416 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-202ENST00000262676 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-202ENST00000262676 FOXD4L4Q8WXT5 416 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-202ENST00000262676 CEP89Q96ST8 783 aa16.05■□□□□ 0.16
TTC39A-202ENST00000262676 ATAD2BQ9ULI0 1458 aa16.05■□□□□ 0.16
TTC39A-202ENST00000262676 CALD1Q05682 793 aaKnown RBP16.04■□□□□ 0.16
TTC39A-202ENST00000262676 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
TTC39A-202ENST00000262676 ATF3P18847 181 aa16.04■□□□□ 0.16
TTC39A-202ENST00000262676 ANKRD30AQ9BXX3 1397 aa16.04■□□□□ 0.16
TTC39A-202ENST00000262676 PPP1R1BQ9UD71 204 aaPredicted RBP16.03■□□□□ 0.16
TTC39A-202ENST00000262676 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
TTC39A-202ENST00000262676 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
TTC39A-202ENST00000262676 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.16
TTC39A-202ENST00000262676 DCAF8L1A6NGE4 600 aa16.02■□□□□ 0.16
TTC39A-202ENST00000262676 PSME1Q06323 249 aa16.02■□□□□ 0.15
TTC39A-202ENST00000262676 ITPRIPQ8IWB1 547 aa16.02■□□□□ 0.15
TTC39A-202ENST00000262676 PES1O00541 588 aaKnown RBP16.01■□□□□ 0.15
TTC39A-202ENST00000262676 ROCK2O75116 1388 aaKnown RBP16.01■□□□□ 0.15
TTC39A-202ENST00000262676 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
TTC39A-202ENST00000262676 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
TTC39A-202ENST00000262676 TAF7LQ5H9L4 462 aa16■□□□□ 0.15
TTC39A-202ENST00000262676 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
TTC39A-202ENST00000262676 MINK1Q8N4C8 1332 aaPredicted RBP15.99■□□□□ 0.15
TTC39A-202ENST00000262676 FMN1Q68DA7 1419 aa15.98■□□□□ 0.15
TTC39A-202ENST00000262676 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
TTC39A-202ENST00000262676 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
TTC39A-202ENST00000262676 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
TTC39A-202ENST00000262676 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
TTC39A-202ENST00000262676 CSPP1Q1MSJ5 1256 aa15.98■□□□□ 0.15
TTC39A-202ENST00000262676 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
TTC39A-202ENST00000262676 RSPH6AQ9H0K4 717 aa15.97■□□□□ 0.15
TTC39A-202ENST00000262676 CCDC34Q96HJ3 373 aa15.96■□□□□ 0.15
TTC39A-202ENST00000262676 FRAT2O75474 233 aaPredicted RBP15.96■□□□□ 0.15
TTC39A-202ENST00000262676 ZNF592Q92610 1267 aa15.95■□□□□ 0.14
TTC39A-202ENST00000262676 RWDD1Q9H446 243 aaPredicted RBP15.95■□□□□ 0.14
TTC39A-202ENST00000262676 VPS53Q5VIR6 699 aa15.95■□□□□ 0.14
TTC39A-202ENST00000262676 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
TTC39A-202ENST00000262676 TPD52L1Q16890 204 aaPredicted RBP15.94■□□□□ 0.14
TTC39A-202ENST00000262676 GORABQ5T7V8 394 aa15.94■□□□□ 0.14
TTC39A-202ENST00000262676 IPO9Q96P70 1041 aaKnown RBP15.94■□□□□ 0.14
TTC39A-202ENST00000262676 IPO8O15397 1037 aaKnown RBP15.94■□□□□ 0.14
TTC39A-202ENST00000262676 RAPGEF2Q9Y4G8 1499 aa15.94■□□□□ 0.14
TTC39A-202ENST00000262676 PHF14O94880 888 aa15.94■□□□□ 0.14
TTC39A-202ENST00000262676 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
TTC39A-202ENST00000262676 TCERG1O14776 1098 aaKnown RBP15.92■□□□□ 0.14
TTC39A-202ENST00000262676 GPS2Q13227 327 aa15.91■□□□□ 0.14
TTC39A-202ENST00000262676 SF3A1Q15459 793 aaKnown RBP15.91■□□□□ 0.14
TTC39A-202ENST00000262676 MARCH6O60337 910 aa15.91■□□□□ 0.14
TTC39A-202ENST00000262676 SF3B2Q13435 895 aaKnown RBP15.91■□□□□ 0.14
TTC39A-202ENST00000262676 FOXD4L6Q3SYB3 417 aaPredicted RBP15.91■□□□□ 0.14
TTC39A-202ENST00000262676 RRP12Q5JTH9 1297 aaKnown RBP15.91■□□□□ 0.14
TTC39A-202ENST00000262676 FOXD4L3Q6VB84 417 aaPredicted RBP15.91■□□□□ 0.14
TTC39A-202ENST00000262676 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
TTC39A-202ENST00000262676 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
TTC39A-202ENST00000262676 PROSER2Q86WR7 435 aaPredicted RBP15.9■□□□□ 0.14
TTC39A-202ENST00000262676 CCDC18Q5T9S5 1454 aa15.89■□□□□ 0.13
TTC39A-202ENST00000262676 TSR1Q2NL82 804 aaKnown RBP15.89■□□□□ 0.13
TTC39A-202ENST00000262676 FBXW7Q969H0 707 aa15.89■□□□□ 0.13
TTC39A-202ENST00000262676 GPATCH3Q96I76 525 aa15.89■□□□□ 0.13
TTC39A-202ENST00000262676 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
TTC39A-202ENST00000262676 TOMM22Q9NS69 142 aa15.89■□□□□ 0.13
TTC39A-202ENST00000262676 SLC4A10Q6U841 1118 aa15.88■□□□□ 0.13
TTC39A-202ENST00000262676 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
TTC39A-202ENST00000262676 CCDC70Q6NSX1 233 aa15.88■□□□□ 0.13
TTC39A-202ENST00000262676 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
TTC39A-202ENST00000262676 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
TTC39A-202ENST00000262676 NESP48681 1621 aa15.87■□□□□ 0.13
TTC39A-202ENST00000262676 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
TTC39A-202ENST00000262676 TSHZ2Q9NRE2 1034 aa15.87■□□□□ 0.13
TTC39A-202ENST00000262676 RSPH4AQ5TD94 716 aa15.87■□□□□ 0.13
TTC39A-202ENST00000262676 KIF16BQ96L93 1317 aa15.86■□□□□ 0.13
TTC39A-202ENST00000262676 GOLGA6L19H0YKK7 550 aa15.86■□□□□ 0.13
TTC39A-202ENST00000262676 STRN4Q9NRL3 753 aa15.86■□□□□ 0.13
TTC39A-202ENST00000262676 FAM13BQ9NYF5 915 aa15.86■□□□□ 0.13
TTC39A-202ENST00000262676 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
TTC39A-202ENST00000262676 H3BQV1 296 aa15.84■□□□□ 0.13
TTC39A-202ENST00000262676 IFFO2Q5TF58 517 aa15.84■□□□□ 0.13
TTC39A-202ENST00000262676 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
TTC39A-202ENST00000262676 TEX35Q5T0J7 233 aa15.84■□□□□ 0.13
TTC39A-202ENST00000262676 STK31Q9BXU1 1019 aa15.84■□□□□ 0.13
TTC39A-202ENST00000262676 BCL11BQ9C0K0 894 aaPredicted RBP15.84■□□□□ 0.13
TTC39A-202ENST00000262676 DDX11L8A8MPP1 907 aa15.84■□□□□ 0.13
TTC39A-202ENST00000262676 CCDC146Q8IYE0 955 aa15.84■□□□□ 0.13
TTC39A-202ENST00000262676 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
TTC39A-202ENST00000262676 TXNDC2Q86VQ3 553 aa15.83■□□□□ 0.13
TTC39A-202ENST00000262676 COG3Q96JB2 828 aa15.83■□□□□ 0.13
TTC39A-202ENST00000262676 CWC22Q9HCG8 908 aaKnown RBP15.83■□□□□ 0.13
TTC39A-202ENST00000262676 SETD5Q9C0A6 1442 aa15.83■□□□□ 0.12
TTC39A-202ENST00000262676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.83■□□□□ 0.12
TTC39A-202ENST00000262676 ESCO1Q5FWF5 840 aa15.83■□□□□ 0.12
TTC39A-202ENST00000262676 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
TTC39A-202ENST00000262676 EIF3AQ14152 1382 aaKnown RBP15.83■□□□□ 0.12
TTC39A-202ENST00000262676 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 235.4 ms