RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 ZBED9Q6R2W3 1325 aa27.72■■■□□ 2.03
RAB11FIP3-201ENST00000262305 MRC2Q9UBG0 1479 aa27.72■■■□□ 2.03
RAB11FIP3-201ENST00000262305 ZRSR1Q15695 479 aaKnown RBP27.71■■■□□ 2.03
RAB11FIP3-201ENST00000262305 PRDM2Q13029 1718 aa27.71■■■□□ 2.03
RAB11FIP3-201ENST00000262305 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.71■■■□□ 2.03
RAB11FIP3-201ENST00000262305 FGD1P98174 961 aa27.71■■■□□ 2.03
RAB11FIP3-201ENST00000262305 CGNL1Q0VF96 1302 aa27.71■■■□□ 2.03
RAB11FIP3-201ENST00000262305 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.02
RAB11FIP3-201ENST00000262305 MCCP23508 829 aa27.69■■■□□ 2.02
RAB11FIP3-201ENST00000262305 STK31Q9BXU1 1019 aa27.69■■■□□ 2.02
RAB11FIP3-201ENST00000262305 IFT140Q96RY7 1462 aa27.68■■■□□ 2.02
RAB11FIP3-201ENST00000262305 CCDC7Q96M83 1385 aa27.67■■■□□ 2.02
RAB11FIP3-201ENST00000262305 CSB-PGBD3P0DP91 1061 aa27.67■■■□□ 2.02
RAB11FIP3-201ENST00000262305 CLUAP1Q96AJ1 413 aa27.66■■■□□ 2.02
RAB11FIP3-201ENST00000262305 APBB1O00213 710 aa27.66■■■□□ 2.02
RAB11FIP3-201ENST00000262305 NPHP1O15259 732 aa27.65■■■□□ 2.02
RAB11FIP3-201ENST00000262305 SYNJ2O15056 1496 aa27.65■■■□□ 2.02
RAB11FIP3-201ENST00000262305 PTMAP06454 111 aaKnown RBP27.64■■■□□ 2.02
RAB11FIP3-201ENST00000262305 KIF7Q2M1P5 1343 aa27.64■■■□□ 2.02
RAB11FIP3-201ENST00000262305 AMPHP49418 695 aa27.64■■■□□ 2.01
RAB11FIP3-201ENST00000262305 NUTM2FA1L443 756 aa27.63■■■□□ 2.01
RAB11FIP3-201ENST00000262305 TSHZ2Q9NRE2 1034 aa27.63■■■□□ 2.01
RAB11FIP3-201ENST00000262305 TPRNQ4KMQ1 711 aa27.62■■■□□ 2.01
RAB11FIP3-201ENST00000262305 PRG4Q92954 1404 aaPredicted RBP27.61■■■□□ 2.01
RAB11FIP3-201ENST00000262305 RRP7AQ9Y3A4 280 aaKnown RBP27.61■■■□□ 2.01
RAB11FIP3-201ENST00000262305 MIA2Q96PC5 1412 aa27.6■■■□□ 2.01
RAB11FIP3-201ENST00000262305 MINK1Q8N4C8 1332 aaPredicted RBP27.59■■■□□ 2.01
RAB11FIP3-201ENST00000262305 E9PSI1 815 aa27.58■■■□□ 2.01
RAB11FIP3-201ENST00000262305 EHBP1L1Q8N3D4 1523 aa27.57■■■□□ 2
RAB11FIP3-201ENST00000262305 DNMBPQ6XZF7 1577 aa27.57■■■□□ 2
RAB11FIP3-201ENST00000262305 COG3Q96JB2 828 aa27.56■■■□□ 2
RAB11FIP3-201ENST00000262305 NGEFQ8N5V2 710 aa27.56■■■□□ 2
RAB11FIP3-201ENST00000262305 HMMRO75330 724 aa27.55■■■□□ 2
RAB11FIP3-201ENST00000262305 GLIPR1L2Q4G1C9 344 aa27.55■■■□□ 2
RAB11FIP3-201ENST00000262305 AFAP1Q8N556 730 aa27.55■■■□□ 2
RAB11FIP3-201ENST00000262305 HDAC5Q9UQL6 1122 aa27.54■■■□□ 2
RAB11FIP3-201ENST00000262305 ARHGAP5Q13017 1502 aa27.53■■■□□ 2
RAB11FIP3-201ENST00000262305 CNTLNQ9NXG0 1405 aa27.53■■■□□ 2
RAB11FIP3-201ENST00000262305 APAF1O14727 1248 aa27.53■■■□□ 2
RAB11FIP3-201ENST00000262305 KIAA1211Q6ZU35 1233 aa27.53■■■□□ 2
RAB11FIP3-201ENST00000262305 TROQ12816 1431 aaPredicted RBP27.53■■■□□ 2
RAB11FIP3-201ENST00000262305 FAM69CQ0P6D2 419 aa27.52■■■□□ 2
RAB11FIP3-201ENST00000262305 SPRYD3Q8NCJ5 442 aa27.52■■■□□ 2
RAB11FIP3-201ENST00000262305 NAP1L2Q9ULW6 460 aaPredicted RBP27.52■■■□□ 2
RAB11FIP3-201ENST00000262305 RRP1P56182 461 aaKnown RBP27.52■■■□□ 2
RAB11FIP3-201ENST00000262305 TIAM1Q13009 1591 aa27.52■■■□□ 2
RAB11FIP3-201ENST00000262305 BICRAQ9NZM4 1560 aa27.51■■□□□ 1.99
RAB11FIP3-201ENST00000262305 HFM1A2PYH4 1435 aa27.49■■□□□ 1.99
RAB11FIP3-201ENST00000262305 LTV1Q96GA3 475 aaPredicted RBP27.49■■□□□ 1.99
RAB11FIP3-201ENST00000262305 WASHC2AQ641Q2 1341 aa27.49■■□□□ 1.99
RAB11FIP3-201ENST00000262305 CDK11BP21127 795 aaKnown RBP27.48■■□□□ 1.99
RAB11FIP3-201ENST00000262305 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
RAB11FIP3-201ENST00000262305 GOLGA6L4A6NEF3 574 aa27.47■■□□□ 1.99
RAB11FIP3-201ENST00000262305 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
RAB11FIP3-201ENST00000262305 CENPQQ7L2Z9 268 aaPredicted RBP27.46■■□□□ 1.99
RAB11FIP3-201ENST00000262305 ABCA10Q8WWZ4 1543 aa27.45■■□□□ 1.98
RAB11FIP3-201ENST00000262305 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.45■■□□□ 1.98
RAB11FIP3-201ENST00000262305 PLIN1O60240 522 aa27.44■■□□□ 1.98
RAB11FIP3-201ENST00000262305 IPO9Q96P70 1041 aaKnown RBP27.44■■□□□ 1.98
RAB11FIP3-201ENST00000262305 C9orf84Q5VXU9 1444 aa27.44■■□□□ 1.98
RAB11FIP3-201ENST00000262305 ZKSCAN2Q63HK3 967 aa27.43■■□□□ 1.98
RAB11FIP3-201ENST00000262305 EXOC6Q8TAG9 804 aa27.43■■□□□ 1.98
RAB11FIP3-201ENST00000262305 MFAP1P55081 439 aaKnown RBP27.43■■□□□ 1.98
RAB11FIP3-201ENST00000262305 PLCB2Q00722 1185 aa27.43■■□□□ 1.98
RAB11FIP3-201ENST00000262305 BCL2L13Q9BXK5 485 aa27.43■■□□□ 1.98
RAB11FIP3-201ENST00000262305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.43■■□□□ 1.981e-6■■■■□ 25.7
RAB11FIP3-201ENST00000262305 DIAPH1O60610 1272 aaKnown RBP27.42■■□□□ 1.98
RAB11FIP3-201ENST00000262305 TAOK2Q9UL54 1235 aa27.42■■□□□ 1.98
RAB11FIP3-201ENST00000262305 HECW1Q76N89 1606 aa27.42■■□□□ 1.98
RAB11FIP3-201ENST00000262305 ZNF330Q9Y3S2 320 aaPredicted RBP27.41■■□□□ 1.98
RAB11FIP3-201ENST00000262305 SLKQ9H2G2 1235 aaPredicted RBP27.41■■□□□ 1.98
RAB11FIP3-201ENST00000262305 KIAA1107Q9UPP5 1409 aa27.41■■□□□ 1.98
RAB11FIP3-201ENST00000262305 DNTTIP2Q5QJE6 756 aaKnown RBP27.4■■□□□ 1.98
RAB11FIP3-201ENST00000262305 PLEKHH2Q8IVE3 1493 aa27.4■■□□□ 1.98
RAB11FIP3-201ENST00000262305 ELL2O00472 640 aaPredicted RBP27.39■■□□□ 1.98
RAB11FIP3-201ENST00000262305 GBP4Q96PP9 640 aa27.39■■□□□ 1.98
RAB11FIP3-201ENST00000262305 L1TD1Q5T7N2 865 aaKnown RBP27.39■■□□□ 1.97
RAB11FIP3-201ENST00000262305 KIAA0586Q9BVV6 1533 aa27.39■■□□□ 1.97
RAB11FIP3-201ENST00000262305 CRBNQ96SW2 442 aa27.38■■□□□ 1.97
RAB11FIP3-201ENST00000262305 BRD4O60885 1362 aaPredicted RBP27.35■■□□□ 1.97
RAB11FIP3-201ENST00000262305 GPATCH3Q96I76 525 aa27.35■■□□□ 1.97
RAB11FIP3-201ENST00000262305 RUNDC1Q96C34 613 aa27.34■■□□□ 1.97
RAB11FIP3-201ENST00000262305 CFAP70Q5T0N1 1121 aa27.34■■□□□ 1.97
RAB11FIP3-201ENST00000262305 COG6Q9Y2V7 657 aa27.34■■□□□ 1.97
RAB11FIP3-201ENST00000262305 DEKP35659 375 aaKnown RBP27.33■■□□□ 1.97
RAB11FIP3-201ENST00000262305 TRIM6-TRIM34B2RNG4 842 aa27.33■■□□□ 1.97
RAB11FIP3-201ENST00000262305 PTMSP20962 102 aa27.32■■□□□ 1.96
RAB11FIP3-201ENST00000262305 TMEM132EQ6IEE7 984 aa27.32■■□□□ 1.96
RAB11FIP3-201ENST00000262305 DAPK1P53355 1430 aa27.32■■□□□ 1.96
RAB11FIP3-201ENST00000262305 NBPF8Q3BBV2 869 aa27.31■■□□□ 1.96
RAB11FIP3-201ENST00000262305 RIPK4P57078 832 aa27.3■■□□□ 1.96
RAB11FIP3-201ENST00000262305 EPRSP07814 1512 aaKnown RBP27.3■■□□□ 1.96
RAB11FIP3-201ENST00000262305 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
RAB11FIP3-201ENST00000262305 PDE4AP27815 886 aa27.29■■□□□ 1.96
RAB11FIP3-201ENST00000262305 FAM161AQ3B820 660 aa27.29■■□□□ 1.96
RAB11FIP3-201ENST00000262305 NBPF1Q3BBV0 1214 aa27.28■■□□□ 1.96
RAB11FIP3-201ENST00000262305 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
RAB11FIP3-201ENST00000262305 CHMP3Q9Y3E7 222 aa27.27■■□□□ 1.96
RAB11FIP3-201ENST00000262305 GOLGA6L6A8MZA4 724 aa27.27■■□□□ 1.96
RAB11FIP3-201ENST00000262305 GORABQ5T7V8 394 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms