RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
ARFGEF1-201ENST00000262215 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
ARFGEF1-201ENST00000262215 FAM13BQ9NYF5 915 aa15.41■□□□□ 0.06
ARFGEF1-201ENST00000262215 DDX49Q9Y6V7 483 aaKnown RBP15.41■□□□□ 0.06
ARFGEF1-201ENST00000262215 FOSBP53539 338 aa15.41■□□□□ 0.06
ARFGEF1-201ENST00000262215 TCERG1O14776 1098 aaKnown RBP15.41■□□□□ 0.06
ARFGEF1-201ENST00000262215 RSPH6AQ9H0K4 717 aa15.4■□□□□ 0.06
ARFGEF1-201ENST00000262215 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
ARFGEF1-201ENST00000262215 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
ARFGEF1-201ENST00000262215 PHF14O94880 888 aa15.4■□□□□ 0.06
ARFGEF1-201ENST00000262215 TCEAL9Q9UHQ7 104 aa15.4■□□□□ 0.06
ARFGEF1-201ENST00000262215 MSH5O43196 834 aa15.4■□□□□ 0.06
ARFGEF1-201ENST00000262215 RRP7AQ9Y3A4 280 aaKnown RBP15.39■□□□□ 0.05
ARFGEF1-201ENST00000262215 ST18O60284 1047 aa15.39■□□□□ 0.05
ARFGEF1-201ENST00000262215 SKIDA1Q1XH10 827 aa15.38■□□□□ 0.05
ARFGEF1-201ENST00000262215 BCL2L13Q9BXK5 485 aa15.38■□□□□ 0.05
ARFGEF1-201ENST00000262215 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
ARFGEF1-201ENST00000262215 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
ARFGEF1-201ENST00000262215 AKAP17AQ02040 695 aaKnown RBP15.38■□□□□ 0.05
ARFGEF1-201ENST00000262215 KTN1Q86UP2 1357 aaKnown RBP15.38■□□□□ 0.05
ARFGEF1-201ENST00000262215 HMMRO75330 724 aa15.37■□□□□ 0.05
ARFGEF1-201ENST00000262215 CCDC70Q6NSX1 233 aa15.37■□□□□ 0.05
ARFGEF1-201ENST00000262215 HOMER1Q86YM7 354 aa15.37■□□□□ 0.05
ARFGEF1-201ENST00000262215 TPM2P07951 284 aa15.37■□□□□ 0.05
ARFGEF1-201ENST00000262215 PRKCSHP14314 528 aaPredicted RBP15.36■□□□□ 0.05
ARFGEF1-201ENST00000262215 DHX37Q8IY37 1157 aaKnown RBP15.36■□□□□ 0.05
ARFGEF1-201ENST00000262215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.36■□□□□ 0.053e-6■■■■■ 117.1
ARFGEF1-201ENST00000262215 TPM1P09493 284 aa15.36■□□□□ 0.05
ARFGEF1-201ENST00000262215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.36■□□□□ 0.05
ARFGEF1-201ENST00000262215 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
ARFGEF1-201ENST00000262215 DHX16O60231 1041 aaKnown RBP15.35■□□□□ 0.05
ARFGEF1-201ENST00000262215 NAP1L1P55209 391 aaKnown RBP15.35■□□□□ 0.05
ARFGEF1-201ENST00000262215 GPS2Q13227 327 aa15.35■□□□□ 0.05
ARFGEF1-201ENST00000262215 KDM4AO75164 1064 aa15.35■□□□□ 0.05
ARFGEF1-201ENST00000262215 SCRIBQ14160 1630 aa15.34■□□□□ 0.05
ARFGEF1-201ENST00000262215 HDGFP51858 240 aaKnown RBP15.34■□□□□ 0.05
ARFGEF1-201ENST00000262215 ANKRD45Q5TZF3 282 aa15.34■□□□□ 0.05
ARFGEF1-201ENST00000262215 PLIN1O60240 522 aa15.33■□□□□ 0.04
ARFGEF1-201ENST00000262215 PLCD4Q9BRC7 762 aa15.32■□□□□ 0.04
ARFGEF1-201ENST00000262215 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
ARFGEF1-201ENST00000262215 NECTIN2Q92692 538 aa15.32■□□□□ 0.04
ARFGEF1-201ENST00000262215 APPP05067 770 aa15.31■□□□□ 0.04
ARFGEF1-201ENST00000262215 GSE1Q14687 1217 aa15.31■□□□□ 0.04
ARFGEF1-201ENST00000262215 AMPHP49418 695 aa15.3■□□□□ 0.04
ARFGEF1-201ENST00000262215 TTLL5Q6EMB2 1281 aa15.3■□□□□ 0.04
ARFGEF1-201ENST00000262215 KIF3AQ9Y496 699 aa15.3■□□□□ 0.04
ARFGEF1-201ENST00000262215 KANK1Q14678 1352 aa15.3■□□□□ 0.04
ARFGEF1-201ENST00000262215 IPO7O95373 1038 aaKnown RBP15.29■□□□□ 0.04
ARFGEF1-201ENST00000262215 ZFYVE27Q5T4F4 411 aa15.29■□□□□ 0.04
ARFGEF1-201ENST00000262215 TRIM34Q9BYJ4 488 aa15.29■□□□□ 0.04
ARFGEF1-201ENST00000262215 DDX11L8A8MPP1 907 aa15.29■□□□□ 0.04
ARFGEF1-201ENST00000262215 CENPJQ9HC77 1338 aaPredicted RBP15.29■□□□□ 0.04
ARFGEF1-201ENST00000262215 SYNE3Q6ZMZ3 975 aa15.29■□□□□ 0.04
ARFGEF1-201ENST00000262215 NGDNQ8NEJ9 315 aaKnown RBP15.28■□□□□ 0.04
ARFGEF1-201ENST00000262215 MTMR7Q9Y216 660 aa15.28■□□□□ 0.04
ARFGEF1-201ENST00000262215 MAP7D2Q96T17 732 aa15.28■□□□□ 0.04
ARFGEF1-201ENST00000262215 PKD2Q13563 968 aa15.28■□□□□ 0.04
ARFGEF1-201ENST00000262215 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
ARFGEF1-201ENST00000262215 BICD2Q8TD16 824 aa15.27■□□□□ 0.04
ARFGEF1-201ENST00000262215 CT47A1Q5JQC4 288 aaPredicted RBP15.27■□□□□ 0.04
ARFGEF1-201ENST00000262215 RUFY1Q96T51 708 aa15.27■□□□□ 0.04
ARFGEF1-201ENST00000262215 TEX35Q5T0J7 233 aa15.27■□□□□ 0.03
ARFGEF1-201ENST00000262215 ROCK2O75116 1388 aaKnown RBP15.26■□□□□ 0.03
ARFGEF1-201ENST00000262215 EIF2S2P20042 333 aaKnown RBP15.26■□□□□ 0.03
ARFGEF1-201ENST00000262215 TRIM29Q14134 588 aa15.26■□□□□ 0.03
ARFGEF1-201ENST00000262215 ANO2Q9NQ90 1003 aa15.26■□□□□ 0.03
ARFGEF1-201ENST00000262215 PKNOX2Q96KN3 472 aa15.25■□□□□ 0.03
ARFGEF1-201ENST00000262215 CCNB3Q8WWL7 1395 aa15.25■□□□□ 0.03
ARFGEF1-201ENST00000262215 ODF2Q5BJF6 829 aa15.24■□□□□ 0.03
ARFGEF1-201ENST00000262215 CWC22Q9HCG8 908 aaKnown RBP15.23■□□□□ 0.03
ARFGEF1-201ENST00000262215 DIAPH3Q9NSV4 1193 aa15.23■□□□□ 0.03
ARFGEF1-201ENST00000262215 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
ARFGEF1-201ENST00000262215 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
ARFGEF1-201ENST00000262215 CCDC43Q96MW1 224 aaKnown RBP15.23■□□□□ 0.03
ARFGEF1-201ENST00000262215 VPS37CA5D8V6 355 aaPredicted RBP15.23■□□□□ 0.03
ARFGEF1-201ENST00000262215 FYB1O15117 783 aa15.23■□□□□ 0.03
ARFGEF1-201ENST00000262215 CPLX1O14810 134 aa15.23■□□□□ 0.03
ARFGEF1-201ENST00000262215 NFXL1Q6ZNB6 911 aa15.22■□□□□ 0.03
ARFGEF1-201ENST00000262215 HSP90AB2PQ58FF8 381 aa15.22■□□□□ 0.03
ARFGEF1-201ENST00000262215 PDILTQ8N807 584 aa15.22■□□□□ 0.03
ARFGEF1-201ENST00000262215 SYTL4Q96C24 671 aaPredicted RBP15.22■□□□□ 0.03
ARFGEF1-201ENST00000262215 IL27Q8NEV9 243 aa15.21■□□□□ 0.03
ARFGEF1-201ENST00000262215 ANKRD20A12PQ8NF67 263 aa15.21■□□□□ 0.03
ARFGEF1-201ENST00000262215 MNS1Q8NEH6 495 aa15.2■□□□□ 0.02
ARFGEF1-201ENST00000262215 NOL10Q9BSC4 688 aaKnown RBP15.2■□□□□ 0.02
ARFGEF1-201ENST00000262215 AK7Q96M32 723 aa15.2■□□□□ 0.02
ARFGEF1-201ENST00000262215 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
ARFGEF1-201ENST00000262215 VPS37DQ86XT2 251 aa15.2■□□□□ 0.02
ARFGEF1-201ENST00000262215 ATP6V1DQ9Y5K8 247 aa15.2■□□□□ 0.02
ARFGEF1-201ENST00000262215 H0YHG0 523 aa15.19■□□□□ 0.02
ARFGEF1-201ENST00000262215 PAF1Q8N7H5 531 aa15.19■□□□□ 0.02
ARFGEF1-201ENST00000262215 CCDC47Q96A33 483 aaKnown RBP15.19■□□□□ 0.02
ARFGEF1-201ENST00000262215 PDE4AP27815 886 aa15.19■□□□□ 0.02
ARFGEF1-201ENST00000262215 FANCIQ9NVI1 1328 aa15.19■□□□□ 0.02
ARFGEF1-201ENST00000262215 AMOTL1Q8IY63 956 aa15.18■□□□□ 0.02
ARFGEF1-201ENST00000262215 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
ARFGEF1-201ENST00000262215 RALBP1Q15311 655 aa15.17■□□□□ 0.02
ARFGEF1-201ENST00000262215 CAGE1Q8TC20 777 aa15.17■□□□□ 0.02
ARFGEF1-201ENST00000262215 R3HCC1Q9Y3T6 440 aaKnown RBP15.17■□□□□ 0.02
ARFGEF1-201ENST00000262215 EVA1CP58658 441 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms