RNA–Protein interactions for RNA: ENST00000260604.8

PNPT1-201, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 3,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-201ENST00000260604 SPAG9O60271 1321 aaKnown RBP11.72□□□□□ -0.53
PNPT1-201ENST00000260604 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
PNPT1-201ENST00000260604 WDR62O43379 1518 aa11.71□□□□□ -0.53
PNPT1-201ENST00000260604 FRAT1Q92837 279 aaPredicted RBP11.71□□□□□ -0.54
PNPT1-201ENST00000260604 RRP1P56182 461 aaKnown RBP11.7□□□□□ -0.54
PNPT1-201ENST00000260604 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
PNPT1-201ENST00000260604 RRP7AQ9Y3A4 280 aaKnown RBP11.7□□□□□ -0.54
PNPT1-201ENST00000260604 TRAK1Q9UPV9 953 aa11.69□□□□□ -0.54
PNPT1-201ENST00000260604 TCOF1Q13428 1488 aaKnown RBP11.69□□□□□ -0.54
PNPT1-201ENST00000260604 STK26Q9P289 416 aa11.69□□□□□ -0.54
PNPT1-201ENST00000260604 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
PNPT1-201ENST00000260604 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
PNPT1-201ENST00000260604 ADAMTS12P58397 1594 aa11.69□□□□□ -0.54
PNPT1-201ENST00000260604 TARBP1Q13395 1621 aaKnown RBP11.69□□□□□ -0.54
PNPT1-201ENST00000260604 MAGI1Q96QZ7 1491 aaPredicted RBP11.67□□□□□ -0.54
PNPT1-201ENST00000260604 ERICH6BQ5W0A0 696 aa11.67□□□□□ -0.54
PNPT1-201ENST00000260604 ATP10BO94823 1461 aa11.67□□□□□ -0.54
PNPT1-201ENST00000260604 PZPP20742 1482 aa11.67□□□□□ -0.54
PNPT1-201ENST00000260604 PPM1GO15355 546 aaPredicted RBP11.67□□□□□ -0.54
PNPT1-201ENST00000260604 CFAP70Q5T0N1 1121 aa11.67□□□□□ -0.54
PNPT1-201ENST00000260604 LRRIQ1Q96JM4 1722 aa11.67□□□□□ -0.54
PNPT1-201ENST00000260604 SYNJ2O15056 1496 aa11.66□□□□□ -0.54
PNPT1-201ENST00000260604 ARHGAP5Q13017 1502 aa11.66□□□□□ -0.54
PNPT1-201ENST00000260604 APAF1O14727 1248 aa11.66□□□□□ -0.54
PNPT1-201ENST00000260604 DEKP35659 375 aaKnown RBP11.66□□□□□ -0.54
PNPT1-201ENST00000260604 TMEM132EQ6IEE7 984 aa11.66□□□□□ -0.54
PNPT1-201ENST00000260604 BCL2L13Q9BXK5 485 aa11.65□□□□□ -0.54
PNPT1-201ENST00000260604 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
PNPT1-201ENST00000260604 KIAA0556O60303 1618 aa11.65□□□□□ -0.55
PNPT1-201ENST00000260604 RAPGEF6Q8TEU7 1601 aa11.65□□□□□ -0.55
PNPT1-201ENST00000260604 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
PNPT1-201ENST00000260604 ARXQ96QS3 562 aa11.64□□□□□ -0.55
PNPT1-201ENST00000260604 TEX14Q8IWB6 1497 aa11.64□□□□□ -0.55
PNPT1-201ENST00000260604 KIF14Q15058 1648 aa11.64□□□□□ -0.55
PNPT1-201ENST00000260604 C20orf194Q5TEA3 1177 aa11.64□□□□□ -0.55
PNPT1-201ENST00000260604 DHX29Q7Z478 1369 aaKnown RBP11.64□□□□□ -0.55
PNPT1-201ENST00000260604 FANCIQ9NVI1 1328 aa11.64□□□□□ -0.55
PNPT1-201ENST00000260604 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
PNPT1-201ENST00000260604 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
PNPT1-201ENST00000260604 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
PNPT1-201ENST00000260604 KDM5BQ9UGL1 1544 aa11.62□□□□□ -0.55
PNPT1-201ENST00000260604 PLEKHH2Q8IVE3 1493 aa11.62□□□□□ -0.55
PNPT1-201ENST00000260604 DISP3Q9P2K9 1392 aa11.62□□□□□ -0.55
PNPT1-201ENST00000260604 U2SURPO15042 1029 aaKnown RBP11.61□□□□□ -0.55
PNPT1-201ENST00000260604 NEFMP07197 916 aa11.61□□□□□ -0.55
PNPT1-201ENST00000260604 PDE4AP27815 886 aa11.61□□□□□ -0.55
PNPT1-201ENST00000260604 MLECQ14165 292 aa11.61□□□□□ -0.55
PNPT1-201ENST00000260604 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
PNPT1-201ENST00000260604 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
PNPT1-201ENST00000260604 IPO9Q96P70 1041 aaKnown RBP11.61□□□□□ -0.55
PNPT1-201ENST00000260604 EIF4G3O43432 1585 aaKnown RBP11.6□□□□□ -0.55
PNPT1-201ENST00000260604 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
PNPT1-201ENST00000260604 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
PNPT1-201ENST00000260604 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.6□□□□□ -0.55
PNPT1-201ENST00000260604 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
PNPT1-201ENST00000260604 BRD4O60885 1362 aaPredicted RBP11.59□□□□□ -0.55
PNPT1-201ENST00000260604 PPP2R1AP30153 589 aa11.59□□□□□ -0.55
PNPT1-201ENST00000260604 DNMT1P26358 1616 aaKnown RBP11.57□□□□□ -0.56
PNPT1-201ENST00000260604 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
PNPT1-201ENST00000260604 BCAR3O75815 825 aa11.57□□□□□ -0.56
PNPT1-201ENST00000260604 SLC12A5Q9H2X9 1139 aa11.57□□□□□ -0.56
PNPT1-201ENST00000260604 ARID4BQ4LE39 1312 aaPredicted RBP11.57□□□□□ -0.56
PNPT1-201ENST00000260604 KANK1Q14678 1352 aa11.56□□□□□ -0.56
PNPT1-201ENST00000260604 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
PNPT1-201ENST00000260604 SCAPERQ9BY12 1400 aa11.56□□□□□ -0.56
PNPT1-201ENST00000260604 TESK2Q96S53 571 aa11.56□□□□□ -0.56
PNPT1-201ENST00000260604 CEP170Q5SW79 1584 aa11.56□□□□□ -0.56
PNPT1-201ENST00000260604 U2AF1L5P0DN76 240 aaPredicted RBP11.56□□□□□ -0.56
PNPT1-201ENST00000260604 U2AF1Q01081 240 aaKnown RBP eCLIP11.56□□□□□ -0.56
PNPT1-201ENST00000260604 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
PNPT1-201ENST00000260604 COG6Q9Y2V7 657 aa11.55□□□□□ -0.56
PNPT1-201ENST00000260604 WASHC2CQ9Y4E1 1318 aa11.55□□□□□ -0.56
PNPT1-201ENST00000260604 CCDC141Q6ZP82 1450 aa11.55□□□□□ -0.56
PNPT1-201ENST00000260604 PDE3BQ13370 1112 aa11.54□□□□□ -0.56
PNPT1-201ENST00000260604 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
PNPT1-201ENST00000260604 TCERG1O14776 1098 aaKnown RBP11.54□□□□□ -0.56
PNPT1-201ENST00000260604 PER1O15534 1290 aaPredicted RBP11.54□□□□□ -0.56
PNPT1-201ENST00000260604 SLC24A1O60721 1099 aa11.54□□□□□ -0.56
PNPT1-201ENST00000260604 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
PNPT1-201ENST00000260604 SOX12O15370 315 aa11.53□□□□□ -0.56
PNPT1-201ENST00000260604 PANK1Q8TE04 598 aa11.53□□□□□ -0.56
PNPT1-201ENST00000260604 POGKQ9P215 609 aa11.53□□□□□ -0.56
PNPT1-201ENST00000260604 SYCP2Q9BX26 1530 aa11.52□□□□□ -0.56
PNPT1-201ENST00000260604 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.56
PNPT1-201ENST00000260604 RAPGEF3O95398 923 aa11.52□□□□□ -0.57
PNPT1-201ENST00000260604 CABP2Q9NPB3 220 aa11.51□□□□□ -0.57
PNPT1-201ENST00000260604 NUTM2FA1L443 756 aa11.5□□□□□ -0.57
PNPT1-201ENST00000260604 MINK1Q8N4C8 1332 aaPredicted RBP11.49□□□□□ -0.57
PNPT1-201ENST00000260604 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
PNPT1-201ENST00000260604 CFAP53Q96M91 514 aa11.49□□□□□ -0.57
PNPT1-201ENST00000260604 PRAG1Q86YV5 1406 aa11.49□□□□□ -0.57
PNPT1-201ENST00000260604 TRAPPC8Q9Y2L5 1435 aa11.49□□□□□ -0.57
PNPT1-201ENST00000260604 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
PNPT1-201ENST00000260604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.49□□□□□ -0.57
PNPT1-201ENST00000260604 FTSJ3Q8IY81 847 aaKnown RBP11.49□□□□□ -0.57
PNPT1-201ENST00000260604 SLKQ9H2G2 1235 aaPredicted RBP11.48□□□□□ -0.57
PNPT1-201ENST00000260604 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
PNPT1-201ENST00000260604 GGNBP2Q9H3C7 697 aa11.48□□□□□ -0.57
PNPT1-201ENST00000260604 MTHFSP49914 203 aa11.48□□□□□ -0.57
PNPT1-201ENST00000260604 NUP160Q12769 1436 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms