RNA–Protein interactions for RNA: ENST00000256830.13

NEDD4L-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 2,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-201ENST00000256830 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.42
NEDD4L-201ENST00000256830 MS4A1P11836 297 aa12.46□□□□□ -0.42
NEDD4L-201ENST00000256830 RBM10P98175 930 aaKnown RBP12.46□□□□□ -0.42
NEDD4L-201ENST00000256830 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
NEDD4L-201ENST00000256830 MPHOSPH9Q99550 1183 aa12.45□□□□□ -0.42
NEDD4L-201ENST00000256830 KDM6BO15054 1643 aa12.45□□□□□ -0.42
NEDD4L-201ENST00000256830 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
NEDD4L-201ENST00000256830 XRCC6P12956 609 aaKnown RBP eCLIP12.44□□□□□ -0.42
NEDD4L-201ENST00000256830 MYOM3Q5VTT5 1437 aa12.44□□□□□ -0.42
NEDD4L-201ENST00000256830 FAM69CQ0P6D2 419 aa12.43□□□□□ -0.42
NEDD4L-201ENST00000256830 C8orf34Q49A92 452 aa12.42□□□□□ -0.42
NEDD4L-201ENST00000256830 SEC24BO95487 1268 aa12.41□□□□□ -0.42
NEDD4L-201ENST00000256830 LRRIQ1Q96JM4 1722 aa12.41□□□□□ -0.42
NEDD4L-201ENST00000256830 NCOA1Q15788 1441 aa12.41□□□□□ -0.42
NEDD4L-201ENST00000256830 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
NEDD4L-201ENST00000256830 FAM161AQ3B820 660 aa12.38□□□□□ -0.43
NEDD4L-201ENST00000256830 EFCAB5A4FU69 1503 aa12.38□□□□□ -0.43
NEDD4L-201ENST00000256830 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
NEDD4L-201ENST00000256830 MAGI3Q5TCQ9 1506 aa12.38□□□□□ -0.43
NEDD4L-201ENST00000256830 ZBTB7CA1YPR0 619 aa12.38□□□□□ -0.43
NEDD4L-201ENST00000256830 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
NEDD4L-201ENST00000256830 GOLGA6L3A6NEY3 463 aa12.36□□□□□ -0.43
NEDD4L-201ENST00000256830 PRDM10Q9NQV6 1147 aa12.36□□□□□ -0.43
NEDD4L-201ENST00000256830 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
NEDD4L-201ENST00000256830 KIAA0556O60303 1618 aa12.35□□□□□ -0.43
NEDD4L-201ENST00000256830 UGGT2Q9NYU1 1516 aa12.34□□□□□ -0.43
NEDD4L-201ENST00000256830 CLCN1P35523 988 aa12.34□□□□□ -0.43
NEDD4L-201ENST00000256830 ZNF644Q9H582 1327 aaPredicted RBP12.33□□□□□ -0.44
NEDD4L-201ENST00000256830 L1TD1Q5T7N2 865 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-201ENST00000256830 ZHX1Q9UKY1 873 aaPredicted RBP12.33□□□□□ -0.44
NEDD4L-201ENST00000256830 CTTNBP2Q8WZ74 1663 aa12.33□□□□□ -0.44
NEDD4L-201ENST00000256830 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-201ENST00000256830 KDM2AQ9Y2K7 1162 aa12.33□□□□□ -0.44
NEDD4L-201ENST00000256830 ADCY10Q96PN6 1610 aa12.32□□□□□ -0.44
NEDD4L-201ENST00000256830 SUPT6HQ7KZ85 1726 aaKnown RBP12.32□□□□□ -0.44
NEDD4L-201ENST00000256830 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-201ENST00000256830 FAM13BQ9NYF5 915 aa12.31□□□□□ -0.44
NEDD4L-201ENST00000256830 ANKRD30BQ9BXX2 1392 aa12.31□□□□□ -0.44
NEDD4L-201ENST00000256830 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
NEDD4L-201ENST00000256830 SPATA31E1Q6ZUB1 1445 aa12.3□□□□□ -0.44
NEDD4L-201ENST00000256830 AAMPQ13685 434 aa12.3□□□□□ -0.44
NEDD4L-201ENST00000256830 CDK13Q14004 1512 aaKnown RBP12.29□□□□□ -0.44
NEDD4L-201ENST00000256830 ESPNB1AK53 854 aa12.29□□□□□ -0.44
NEDD4L-201ENST00000256830 ASXL2Q76L83 1435 aa12.29□□□□□ -0.44
NEDD4L-201ENST00000256830 HECW1Q76N89 1606 aa12.29□□□□□ -0.44
NEDD4L-201ENST00000256830 KTN1Q86UP2 1357 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-201ENST00000256830 AEBP2Q6ZN18 517 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-201ENST00000256830 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
NEDD4L-201ENST00000256830 EHBP1L1Q8N3D4 1523 aa12.28□□□□□ -0.44
NEDD4L-201ENST00000256830 KIAA1211Q6ZU35 1233 aa12.27□□□□□ -0.44
NEDD4L-201ENST00000256830 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.44
NEDD4L-201ENST00000256830 TRIM44Q96DX7 344 aaPredicted RBP12.27□□□□□ -0.45
NEDD4L-201ENST00000256830 USP19O94966 1318 aa12.26□□□□□ -0.45
NEDD4L-201ENST00000256830 RPRD2Q5VT52 1461 aaKnown RBP12.26□□□□□ -0.45
NEDD4L-201ENST00000256830 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
NEDD4L-201ENST00000256830 PRDM4Q9UKN5 801 aa12.26□□□□□ -0.45
NEDD4L-201ENST00000256830 ATP10BO94823 1461 aa12.26□□□□□ -0.45
NEDD4L-201ENST00000256830 KDM2BQ8NHM5 1336 aa12.26□□□□□ -0.45
NEDD4L-201ENST00000256830 PLEKHD1A6NEE1 506 aa12.26□□□□□ -0.45
NEDD4L-201ENST00000256830 GCC2Q8IWJ2 1684 aa12.26□□□□□ -0.45
NEDD4L-201ENST00000256830 TCOF1Q13428 1488 aaKnown RBP12.25□□□□□ -0.45
NEDD4L-201ENST00000256830 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
NEDD4L-201ENST00000256830 NUP153P49790 1475 aaKnown RBP12.25□□□□□ -0.45
NEDD4L-201ENST00000256830 ABCC2Q92887 1545 aa12.25□□□□□ -0.45
NEDD4L-201ENST00000256830 IGHDP01880 384 aa12.25□□□□□ -0.45
NEDD4L-201ENST00000256830 ZNF777Q9ULD5 760 aaPredicted RBP12.25□□□□□ -0.45
NEDD4L-201ENST00000256830 TRAK2O60296 914 aa12.24□□□□□ -0.45
NEDD4L-201ENST00000256830 USP47Q96K76 1375 aa12.24□□□□□ -0.45
NEDD4L-201ENST00000256830 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
NEDD4L-201ENST00000256830 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
NEDD4L-201ENST00000256830 BCORL1Q5H9F3 1711 aa12.24□□□□□ -0.45
NEDD4L-201ENST00000256830 TBC1D2Q9BYX2 928 aa12.23□□□□□ -0.45
NEDD4L-201ENST00000256830 BECN1Q14457 450 aa12.23□□□□□ -0.45
NEDD4L-201ENST00000256830 BCAR3O75815 825 aa12.22□□□□□ -0.45
NEDD4L-201ENST00000256830 MCM4P33991 863 aa12.22□□□□□ -0.45
NEDD4L-201ENST00000256830 FGD1P98174 961 aa12.22□□□□□ -0.45
NEDD4L-201ENST00000256830 GAS2L3Q86XJ1 694 aa12.22□□□□□ -0.45
NEDD4L-201ENST00000256830 CARD11Q9BXL7 1154 aa12.22□□□□□ -0.45
NEDD4L-201ENST00000256830 GRPEL1Q9HAV7 217 aa12.22□□□□□ -0.45
NEDD4L-201ENST00000256830 MYBBP1AQ9BQG0 1328 aaKnown RBP12.21□□□□□ -0.45
NEDD4L-201ENST00000256830 PDCL3Q9H2J4 239 aa12.21□□□□□ -0.45
NEDD4L-201ENST00000256830 TSPOAP1O95153 1857 aa12.21□□□□□ -0.46
NEDD4L-201ENST00000256830 RAPGEF3O95398 923 aa12.21□□□□□ -0.46
NEDD4L-201ENST00000256830 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.46
NEDD4L-201ENST00000256830 ABCC5O15440 1437 aa12.2□□□□□ -0.46
NEDD4L-201ENST00000256830 EPRSP07814 1512 aaKnown RBP12.2□□□□□ -0.46
NEDD4L-201ENST00000256830 FSD2A1L4K1 749 aa12.2□□□□□ -0.46
NEDD4L-201ENST00000256830 ANTXR1Q9H6X2 564 aa12.2□□□□□ -0.46
NEDD4L-201ENST00000256830 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
NEDD4L-201ENST00000256830 DAPK1P53355 1430 aa12.2□□□□□ -0.46
NEDD4L-201ENST00000256830 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-201ENST00000256830 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-201ENST00000256830 PDE4CQ08493 712 aa12.19□□□□□ -0.46
NEDD4L-201ENST00000256830 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-201ENST00000256830 PKD2Q13563 968 aa12.18□□□□□ -0.46
NEDD4L-201ENST00000256830 ABCA8O94911 1581 aa12.18□□□□□ -0.46
NEDD4L-201ENST00000256830 RIPK4P57078 832 aa12.18□□□□□ -0.46
NEDD4L-201ENST00000256830 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
NEDD4L-201ENST00000256830 ADAMTS8Q9UP79 889 aa12.17□□□□□ -0.46
NEDD4L-201ENST00000256830 PANK1Q8TE04 598 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms