RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 FGD1P98174 961 aa15.34■□□□□ 0.05
PDE6B-201ENST00000255622 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
PDE6B-201ENST00000255622 KDM2AQ9Y2K7 1162 aa15.34■□□□□ 0.05
PDE6B-201ENST00000255622 KDM5CP41229 1560 aa15.33■□□□□ 0.04
PDE6B-201ENST00000255622 TSPY4P0CV99 314 aa15.32■□□□□ 0.04
PDE6B-201ENST00000255622 TSPY10P0CW01 314 aa15.32■□□□□ 0.04
PDE6B-201ENST00000255622 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
PDE6B-201ENST00000255622 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
PDE6B-201ENST00000255622 SHANK2Q9UPX8 1470 aa15.31■□□□□ 0.04
PDE6B-201ENST00000255622 RBM10P98175 930 aaKnown RBP15.3■□□□□ 0.04
PDE6B-201ENST00000255622 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
PDE6B-201ENST00000255622 DCAF11Q8TEB1 546 aa15.28■□□□□ 0.04
PDE6B-201ENST00000255622 PTPRGP23470 1445 aa15.28■□□□□ 0.04
PDE6B-201ENST00000255622 SAMD9LQ8IVG5 1584 aa15.27■□□□□ 0.03
PDE6B-201ENST00000255622 RALGAPBQ86X10 1494 aa15.26■□□□□ 0.03
PDE6B-201ENST00000255622 ST20-MTHFSA0A0A6YYL1 179 aa15.26■□□□□ 0.03
PDE6B-201ENST00000255622 UHRF1BP1Q6BDS2 1440 aa15.26■□□□□ 0.03
PDE6B-201ENST00000255622 CDC42BPBQ9Y5S2 1711 aa15.25■□□□□ 0.03
PDE6B-201ENST00000255622 KDM5DQ9BY66 1539 aa15.25■□□□□ 0.03
PDE6B-201ENST00000255622 B4GALNT3Q6L9W6 998 aa15.24■□□□□ 0.03
PDE6B-201ENST00000255622 ARHGEF5Q12774 1597 aa15.23■□□□□ 0.03
PDE6B-201ENST00000255622 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
PDE6B-201ENST00000255622 CCDC141Q6ZP82 1450 aa15.22■□□□□ 0.03
PDE6B-201ENST00000255622 ARHGEF12Q9NZN5 1544 aa15.22■□□□□ 0.03
PDE6B-201ENST00000255622 AAMPQ13685 434 aa15.22■□□□□ 0.03
PDE6B-201ENST00000255622 FAM135AQ9P2D6 1515 aa15.22■□□□□ 0.03
PDE6B-201ENST00000255622 PREX2Q70Z35 1606 aa15.22■□□□□ 0.03
PDE6B-201ENST00000255622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDE6B-201ENST00000255622 SYCP2Q9BX26 1530 aa15.21■□□□□ 0.03
PDE6B-201ENST00000255622 RGL3Q3MIN7 710 aa15.21■□□□□ 0.03
PDE6B-201ENST00000255622 TTC37Q6PGP7 1564 aa15.21■□□□□ 0.02
PDE6B-201ENST00000255622 RTL5Q5HYW3 569 aaPredicted RBP15.2■□□□□ 0.02
PDE6B-201ENST00000255622 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
PDE6B-201ENST00000255622 CHD1O14646 1710 aa15.19■□□□□ 0.02
PDE6B-201ENST00000255622 ARID4BQ4LE39 1312 aaPredicted RBP15.18■□□□□ 0.02
PDE6B-201ENST00000255622 ARHGAP5Q13017 1502 aa15.18■□□□□ 0.02
PDE6B-201ENST00000255622 TMC1Q8TDI8 760 aa15.18■□□□□ 0.02
PDE6B-201ENST00000255622 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
PDE6B-201ENST00000255622 ERCC6L2Q5T890 1561 aa15.17■□□□□ 0.02
PDE6B-201ENST00000255622 NBPF1Q3BBV0 1214 aa15.16■□□□□ 0.02
PDE6B-201ENST00000255622 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
PDE6B-201ENST00000255622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.16■□□□□ 0.02
PDE6B-201ENST00000255622 CCDC144AA2RUR9 1427 aa15.16■□□□□ 0.02
PDE6B-201ENST00000255622 SMG6Q86US8 1419 aaKnown RBP15.16■□□□□ 0.02
PDE6B-201ENST00000255622 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
PDE6B-201ENST00000255622 NUDCQ9Y266 331 aa15.14■□□□□ 0.01
PDE6B-201ENST00000255622 PRAG1Q86YV5 1406 aa15.14■□□□□ 0.01
PDE6B-201ENST00000255622 PLEKHH2Q8IVE3 1493 aa15.13■□□□□ 0.01
PDE6B-201ENST00000255622 TRPM1Q7Z4N2 1603 aa15.13■□□□□ 0.01
PDE6B-201ENST00000255622 E9PCH4 1651 aa15.12■□□□□ 0.01
PDE6B-201ENST00000255622 A2MP01023 1474 aa15.11■□□□□ 0.01
PDE6B-201ENST00000255622 RSPH4AQ5TD94 716 aa15.11■□□□□ 0.01
PDE6B-201ENST00000255622 UNC13BO14795 1591 aa15.1■□□□□ 0.01
PDE6B-201ENST00000255622 PAXIP1Q6ZW49 1069 aaPredicted RBP15.1■□□□□ 0.01
PDE6B-201ENST00000255622 MYBBP1AQ9BQG0 1328 aaKnown RBP15.1■□□□□ 0.01
PDE6B-201ENST00000255622 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
PDE6B-201ENST00000255622 SHROOM2Q13796 1616 aa15.09■□□□□ 0.01
PDE6B-201ENST00000255622 MYO5CQ9NQX4 1742 aa15.08■□□□□ 0.01
PDE6B-201ENST00000255622 MAST1Q9Y2H9 1570 aa15.08■□□□□ 0
PDE6B-201ENST00000255622 ABCC2Q92887 1545 aa15.07■□□□□ 0
PDE6B-201ENST00000255622 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
PDE6B-201ENST00000255622 DISP3Q9P2K9 1392 aa15.07■□□□□ 0
PDE6B-201ENST00000255622 BRD4O60885 1362 aaPredicted RBP15.06■□□□□ 0
PDE6B-201ENST00000255622 RALBP1Q15311 655 aa15.06■□□□□ 0
PDE6B-201ENST00000255622 IQGAP3Q86VI3 1631 aa15.06■□□□□ 0
PDE6B-201ENST00000255622 RNF123Q5XPI4 1314 aa15.05■□□□□ 0
PDE6B-201ENST00000255622 TAF7LQ5H9L4 462 aa15.05■□□□□ -0
PDE6B-201ENST00000255622 PLXNC1O60486 1568 aa15.05■□□□□ -0
PDE6B-201ENST00000255622 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ -0
PDE6B-201ENST00000255622 DHX37Q8IY37 1157 aaKnown RBP15.04■□□□□ -0
PDE6B-201ENST00000255622 TESK2Q96S53 571 aa15.04■□□□□ -0
PDE6B-201ENST00000255622 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
PDE6B-201ENST00000255622 PER1O15534 1290 aaPredicted RBP15.03■□□□□ -0
PDE6B-201ENST00000255622 PARD3Q8TEW0 1356 aa15.02■□□□□ -0
PDE6B-201ENST00000255622 GPRASP1Q5JY77 1395 aa15.02■□□□□ -0
PDE6B-201ENST00000255622 PRDM15P57071 1507 aaPredicted RBP15.02□□□□□ -0.01
PDE6B-201ENST00000255622 DUOX2Q9NRD8 1548 aa15.02□□□□□ -0.01
PDE6B-201ENST00000255622 COL17A1Q9UMD9 1497 aaPredicted RBP15.02□□□□□ -0.01
PDE6B-201ENST00000255622 TRAPPC8Q9Y2L5 1435 aa15.01□□□□□ -0.01
PDE6B-201ENST00000255622 NLRP13Q86W25 1043 aa15.01□□□□□ -0.01
PDE6B-201ENST00000255622 ZCCHC11Q5TAX3 1644 aaKnown RBP15.01□□□□□ -0.01
PDE6B-201ENST00000255622 PANK3Q9H999 370 aa15□□□□□ -0.01
PDE6B-201ENST00000255622 PLCH2O75038 1416 aa15□□□□□ -0.01
PDE6B-201ENST00000255622 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
PDE6B-201ENST00000255622 MAGI2Q86UL8 1455 aa14.99□□□□□ -0.01
PDE6B-201ENST00000255622 AFAP1Q8N556 730 aa14.98□□□□□ -0.01
PDE6B-201ENST00000255622 RSPH6AQ9H0K4 717 aa14.98□□□□□ -0.01
PDE6B-201ENST00000255622 EFCAB2Q5VUJ9 269 aa14.98□□□□□ -0.01
PDE6B-201ENST00000255622 CDCA7LQ96GN5 454 aa14.97□□□□□ -0.01
PDE6B-201ENST00000255622 BRPF3Q9ULD4 1205 aa14.97□□□□□ -0.01
PDE6B-201ENST00000255622 ABCC1P33527 1531 aa14.97□□□□□ -0.01
PDE6B-201ENST00000255622 LAMC1P11047 1609 aa14.96□□□□□ -0.01
PDE6B-201ENST00000255622 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
PDE6B-201ENST00000255622 NOP58Q9Y2X3 529 aaKnown RBP14.96□□□□□ -0.02
PDE6B-201ENST00000255622 EIF2AK4Q9P2K8 1649 aaKnown RBP14.96□□□□□ -0.02
PDE6B-201ENST00000255622 ATP10AO60312 1499 aa14.95□□□□□ -0.02
PDE6B-201ENST00000255622 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
PDE6B-201ENST00000255622 TMF1P82094 1093 aa14.95□□□□□ -0.02
PDE6B-201ENST00000255622 EXOC6Q8TAG9 804 aa14.94□□□□□ -0.02
PDE6B-201ENST00000255622 RCAN3Q9UKA8 241 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms