RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.99■■□□□ 1.11
ACTN4-201ENST00000252699 RTF1Q92541 710 aaKnown RBP21.98■■□□□ 1.11
ACTN4-201ENST00000252699 RCAN3Q9UKA8 241 aa21.98■■□□□ 1.11
ACTN4-201ENST00000252699 CHMP4BQ9H444 224 aaKnown RBP21.98■■□□□ 1.11
ACTN4-201ENST00000252699 EVC2Q86UK5 1308 aa21.98■■□□□ 1.11
ACTN4-201ENST00000252699 PCF11O94913 1555 aaKnown RBP21.98■■□□□ 1.11
ACTN4-201ENST00000252699 PLB1Q6P1J6 1458 aa21.97■■□□□ 1.11
ACTN4-201ENST00000252699 MINK1Q8N4C8 1332 aaPredicted RBP21.97■■□□□ 1.11
ACTN4-201ENST00000252699 PLEKHH2Q8IVE3 1493 aa21.96■■□□□ 1.11
ACTN4-201ENST00000252699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.96■■□□□ 1.113e-6■■■□□ 14.7
ACTN4-201ENST00000252699 SCAPERQ9BY12 1400 aa21.95■■□□□ 1.1
ACTN4-201ENST00000252699 CCDC146Q8IYE0 955 aa21.95■■□□□ 1.1
ACTN4-201ENST00000252699 DAPK1P53355 1430 aa21.94■■□□□ 1.1
ACTN4-201ENST00000252699 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
ACTN4-201ENST00000252699 NBR1Q14596 966 aa21.93■■□□□ 1.1
ACTN4-201ENST00000252699 KIF7Q2M1P5 1343 aa21.92■■□□□ 1.1
ACTN4-201ENST00000252699 GOLGA2Q08379 1002 aa21.91■■□□□ 1.1
ACTN4-201ENST00000252699 CCDC7Q96M83 1385 aa21.91■■□□□ 1.1
ACTN4-201ENST00000252699 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
ACTN4-201ENST00000252699 CENPJQ9HC77 1338 aaPredicted RBP21.89■■□□□ 1.1
ACTN4-201ENST00000252699 KIAA1107Q9UPP5 1409 aa21.89■■□□□ 1.09
ACTN4-201ENST00000252699 CGNL1Q0VF96 1302 aa21.89■■□□□ 1.09
ACTN4-201ENST00000252699 RAPGEF3O95398 923 aa21.89■■□□□ 1.09
ACTN4-201ENST00000252699 DDRGK1Q96HY6 314 aa21.89■■□□□ 1.09
ACTN4-201ENST00000252699 BECN1Q14457 450 aa21.88■■□□□ 1.09
ACTN4-201ENST00000252699 NAIPQ13075 1403 aa21.87■■□□□ 1.09
ACTN4-201ENST00000252699 PDE3BQ13370 1112 aa21.87■■□□□ 1.09
ACTN4-201ENST00000252699 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
ACTN4-201ENST00000252699 CSB-PGBD3P0DP91 1061 aa21.86■■□□□ 1.09
ACTN4-201ENST00000252699 TMEM132EQ6IEE7 984 aa21.86■■□□□ 1.09
ACTN4-201ENST00000252699 IPO8O15397 1037 aaKnown RBP21.85■■□□□ 1.09
ACTN4-201ENST00000252699 MAP3K1Q13233 1512 aa21.85■■□□□ 1.09
ACTN4-201ENST00000252699 CFAP70Q5T0N1 1121 aa21.85■■□□□ 1.09
ACTN4-201ENST00000252699 AMPHP49418 695 aa21.85■■□□□ 1.09
ACTN4-201ENST00000252699 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.85■■□□□ 1.09
ACTN4-201ENST00000252699 ERICH6BQ5W0A0 696 aa21.84■■□□□ 1.09
ACTN4-201ENST00000252699 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.09
ACTN4-201ENST00000252699 WASHC2AQ641Q2 1341 aa21.83■■□□□ 1.08
ACTN4-201ENST00000252699 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
ACTN4-201ENST00000252699 NBPF1Q3BBV0 1214 aa21.81■■□□□ 1.08
ACTN4-201ENST00000252699 CASC1Q6TDU7 716 aa21.81■■□□□ 1.08
ACTN4-201ENST00000252699 RRP7AQ9Y3A4 280 aaKnown RBP21.8■■□□□ 1.08
ACTN4-201ENST00000252699 COG3Q96JB2 828 aa21.8■■□□□ 1.08
ACTN4-201ENST00000252699 OS9Q13438 667 aaPredicted RBP21.79■■□□□ 1.08
ACTN4-201ENST00000252699 ANP32BQ92688 251 aaKnown RBP21.79■■□□□ 1.08
ACTN4-201ENST00000252699 LTV1Q96GA3 475 aaPredicted RBP21.79■■□□□ 1.08
ACTN4-201ENST00000252699 SMC4Q9NTJ3 1288 aa21.76■■□□□ 1.07
ACTN4-201ENST00000252699 ABCC5O15440 1437 aa21.75■■□□□ 1.07
ACTN4-201ENST00000252699 CCDC141Q6ZP82 1450 aa21.75■■□□□ 1.07
ACTN4-201ENST00000252699 CNTLNQ9NXG0 1405 aa21.74■■□□□ 1.07
ACTN4-201ENST00000252699 CAMSAP2Q08AD1 1489 aa21.74■■□□□ 1.07
ACTN4-201ENST00000252699 ITPRIPQ8IWB1 547 aa21.74■■□□□ 1.07
ACTN4-201ENST00000252699 EIF5BO60841 1220 aaKnown RBP21.74■■□□□ 1.07
ACTN4-201ENST00000252699 LMOD3Q0VAK6 560 aa21.73■■□□□ 1.07
ACTN4-201ENST00000252699 ZBED9Q6R2W3 1325 aa21.73■■□□□ 1.07
ACTN4-201ENST00000252699 CLUAP1Q96AJ1 413 aa21.73■■□□□ 1.07
ACTN4-201ENST00000252699 APAF1O14727 1248 aa21.72■■□□□ 1.07
ACTN4-201ENST00000252699 PTPN23Q9H3S7 1636 aa21.71■■□□□ 1.07
ACTN4-201ENST00000252699 CABP2Q9NPB3 220 aa21.71■■□□□ 1.07
ACTN4-201ENST00000252699 SLC52A1Q9NWF4 448 aa21.7■■□□□ 1.06
ACTN4-201ENST00000252699 CD109Q6YHK3 1445 aa21.69■■□□□ 1.06
ACTN4-201ENST00000252699 STK31Q9BXU1 1019 aa21.69■■□□□ 1.06
ACTN4-201ENST00000252699 RWDD1Q9H446 243 aaPredicted RBP21.67■■□□□ 1.06
ACTN4-201ENST00000252699 KIF14Q15058 1648 aa21.66■■□□□ 1.06
ACTN4-201ENST00000252699 APBB1O00213 710 aa21.66■■□□□ 1.06
ACTN4-201ENST00000252699 NPHP1O15259 732 aa21.66■■□□□ 1.06
ACTN4-201ENST00000252699 CHMP4AQ9BY43 222 aa21.65■■□□□ 1.06
ACTN4-201ENST00000252699 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
ACTN4-201ENST00000252699 GGNBP2Q9H3C7 697 aa21.65■■□□□ 1.06
ACTN4-201ENST00000252699 NCOA1Q15788 1441 aa21.65■■□□□ 1.06
ACTN4-201ENST00000252699 TXNDC2Q86VQ3 553 aa21.65■■□□□ 1.06
ACTN4-201ENST00000252699 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
ACTN4-201ENST00000252699 E9PSI1 815 aa21.64■■□□□ 1.05
ACTN4-201ENST00000252699 ELL2O00472 640 aaPredicted RBP21.61■■□□□ 1.05
ACTN4-201ENST00000252699 ANKRD30BQ9BXX2 1392 aa21.61■■□□□ 1.05
ACTN4-201ENST00000252699 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
ACTN4-201ENST00000252699 PRAM1Q96QH2 718 aa21.61■■□□□ 1.05
ACTN4-201ENST00000252699 BCL2L13Q9BXK5 485 aa21.61■■□□□ 1.05
ACTN4-201ENST00000252699 ADGRL1O94910 1474 aa21.6■■□□□ 1.05
ACTN4-201ENST00000252699 ZNF330Q9Y3S2 320 aaPredicted RBP21.6■■□□□ 1.05
ACTN4-201ENST00000252699 PSME1Q06323 249 aa21.59■■□□□ 1.05
ACTN4-201ENST00000252699 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
ACTN4-201ENST00000252699 PLIN1O60240 522 aa21.58■■□□□ 1.05
ACTN4-201ENST00000252699 GOLGA6L22H0YM25 854 aa21.58■■□□□ 1.05
ACTN4-201ENST00000252699 PMFBP1Q8TBY8 1022 aa21.58■■□□□ 1.05
ACTN4-201ENST00000252699 ERBINQ96RT1 1412 aa21.58■■□□□ 1.04
ACTN4-201ENST00000252699 RBM19Q9Y4C8 960 aaKnown RBP21.58■■□□□ 1.04
ACTN4-201ENST00000252699 SLC4A10Q6U841 1118 aa21.57■■□□□ 1.04
ACTN4-201ENST00000252699 NGEFQ8N5V2 710 aa21.57■■□□□ 1.04
ACTN4-201ENST00000252699 TCERG1O14776 1098 aaKnown RBP21.57■■□□□ 1.04
ACTN4-201ENST00000252699 KCNJ4P48050 445 aa21.56■■□□□ 1.04
ACTN4-201ENST00000252699 SLC12A5Q9H2X9 1139 aa21.56■■□□□ 1.04
ACTN4-201ENST00000252699 GPATCH8Q9UKJ3 1502 aaKnown RBP21.56■■□□□ 1.04
ACTN4-201ENST00000252699 CCDC9Q9Y3X0 531 aaKnown RBP21.56■■□□□ 1.04
ACTN4-201ENST00000252699 ATP10BO94823 1461 aa21.56■■□□□ 1.04
ACTN4-201ENST00000252699 BRD4O60885 1362 aaPredicted RBP21.55■■□□□ 1.04
ACTN4-201ENST00000252699 RPGRIP1LQ68CZ1 1315 aa21.55■■□□□ 1.04
ACTN4-201ENST00000252699 NOP58Q9Y2X3 529 aaKnown RBP21.55■■□□□ 1.04
ACTN4-201ENST00000252699 RUNDC1Q96C34 613 aa21.54■■□□□ 1.04
ACTN4-201ENST00000252699 MTHFSP49914 203 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms