RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 RRP7AQ9Y3A4 280 aaKnown RBP6.05□□□□□ -1.44
RAP1B-201ENST00000250559 PHLDB1Q86UU1 1377 aa6.05□□□□□ -1.44
RAP1B-201ENST00000250559 CCER2I3L3R5 266 aa6.05□□□□□ -1.44
RAP1B-201ENST00000250559 CASC1Q6TDU7 716 aa6.04□□□□□ -1.44
RAP1B-201ENST00000250559 JPH4Q96JJ6 628 aa6.04□□□□□ -1.44
RAP1B-201ENST00000250559 MYCNP04198 464 aaPredicted RBP6.04□□□□□ -1.44
RAP1B-201ENST00000250559 OS9Q13438 667 aaPredicted RBP6.04□□□□□ -1.44
RAP1B-201ENST00000250559 HSP90AB1P08238 724 aaKnown RBP6.04□□□□□ -1.44
RAP1B-201ENST00000250559 LRRC9Q6ZRR7 1453 aa6.04□□□□□ -1.44
RAP1B-201ENST00000250559 GAPVD1Q14C86 1478 aa6.03□□□□□ -1.44
RAP1B-201ENST00000250559 SLC26A8Q96RN1 970 aa6.03□□□□□ -1.44
RAP1B-201ENST00000250559 PLCB2Q00722 1185 aa6.03□□□□□ -1.44
RAP1B-201ENST00000250559 U2AF1L5P0DN76 240 aaPredicted RBP6.03□□□□□ -1.44
RAP1B-201ENST00000250559 U2AF1Q01081 240 aaKnown RBP eCLIP6.03□□□□□ -1.441e-8■■■□□ 16.3
RAP1B-201ENST00000250559 CWC22Q9HCG8 908 aaKnown RBP6.03□□□□□ -1.44
RAP1B-201ENST00000250559 ITPRIPQ8IWB1 547 aa6.03□□□□□ -1.44
RAP1B-201ENST00000250559 TSHZ2Q9NRE2 1034 aa6.03□□□□□ -1.44
RAP1B-201ENST00000250559 ST20-MTHFSA0A0A6YYL1 179 aa6.03□□□□□ -1.44
RAP1B-201ENST00000250559 RAPGEF3O95398 923 aa6.03□□□□□ -1.44
RAP1B-201ENST00000250559 HDGFL2Q7Z4V5 671 aaPredicted RBP6.03□□□□□ -1.44
RAP1B-201ENST00000250559 RCAN3Q9UKA8 241 aa6.03□□□□□ -1.44
RAP1B-201ENST00000250559 NAP1L2Q9ULW6 460 aaPredicted RBP6.03□□□□□ -1.44
RAP1B-201ENST00000250559 SPAG9O60271 1321 aaKnown RBP6.02□□□□□ -1.45
RAP1B-201ENST00000250559 TRIM44Q96DX7 344 aaPredicted RBP6.02□□□□□ -1.45
RAP1B-201ENST00000250559 SLC4A3P48751 1232 aa6.02□□□□□ -1.45
RAP1B-201ENST00000250559 GZF1Q9H116 711 aaPredicted RBP6.02□□□□□ -1.45
RAP1B-201ENST00000250559 HDGFP51858 240 aaKnown RBP6.02□□□□□ -1.45
RAP1B-201ENST00000250559 TIMELESSQ9UNS1 1208 aa6.02□□□□□ -1.45
RAP1B-201ENST00000250559 CCDC144AA2RUR9 1427 aa6.02□□□□□ -1.45
RAP1B-201ENST00000250559 KRI1Q8N9T8 703 aaKnown RBP6.02□□□□□ -1.45
RAP1B-201ENST00000250559 BCL2L13Q9BXK5 485 aa6.01□□□□□ -1.45
RAP1B-201ENST00000250559 ARAP1Q96P48 1450 aa6.01□□□□□ -1.45
RAP1B-201ENST00000250559 C8orf37Q96NL8 207 aa6.01□□□□□ -1.45
RAP1B-201ENST00000250559 ELL2O00472 640 aaPredicted RBP6.01□□□□□ -1.45
RAP1B-201ENST00000250559 CHMP3Q9Y3E7 222 aa6.01□□□□□ -1.45
RAP1B-201ENST00000250559 PSME1Q06323 249 aa6.01□□□□□ -1.45
RAP1B-201ENST00000250559 FOXD4L1Q9NU39 408 aa6.01□□□□□ -1.45
RAP1B-201ENST00000250559 DDX54Q8TDD1 881 aaKnown RBP6.01□□□□□ -1.45
RAP1B-201ENST00000250559 NCOA2Q15596 1464 aa6□□□□□ -1.45
RAP1B-201ENST00000250559 RTF1Q92541 710 aaKnown RBP6□□□□□ -1.45
RAP1B-201ENST00000250559 PANK3Q9H999 370 aa6□□□□□ -1.45
RAP1B-201ENST00000250559 SMC4Q9NTJ3 1288 aa6□□□□□ -1.45
RAP1B-201ENST00000250559 FGD6Q6ZV73 1430 aa6□□□□□ -1.45
RAP1B-201ENST00000250559 CUX1P39880 1505 aa6□□□□□ -1.45
RAP1B-201ENST00000250559 PRKRIP1Q9H875 184 aaPredicted RBP6□□□□□ -1.45
RAP1B-201ENST00000250559 SLC4A10Q6U841 1118 aa6□□□□□ -1.45
RAP1B-201ENST00000250559 CC2D2AQ9P2K1 1620 aa5.99□□□□□ -1.45
RAP1B-201ENST00000250559 USP47Q96K76 1375 aa5.99□□□□□ -1.45
RAP1B-201ENST00000250559 ESCO1Q5FWF5 840 aa5.99□□□□□ -1.45
RAP1B-201ENST00000250559 BCL11BQ9C0K0 894 aaPredicted RBP5.99□□□□□ -1.45
RAP1B-201ENST00000250559 CLEC11AQ9Y240 323 aa5.99□□□□□ -1.45
RAP1B-201ENST00000250559 NOL8Q76FK4 1167 aaKnown RBP5.99□□□□□ -1.45
RAP1B-201ENST00000250559 EIF3AQ14152 1382 aaKnown RBP5.99□□□□□ -1.45
RAP1B-201ENST00000250559 MFAP1P55081 439 aaKnown RBP5.99□□□□□ -1.45
RAP1B-201ENST00000250559 PNNQ9H307 717 aaKnown RBP5.99□□□□□ -1.45
RAP1B-201ENST00000250559 MYBBP1AQ9BQG0 1328 aaKnown RBP5.99□□□□□ -1.45
RAP1B-201ENST00000250559 WWC1Q8IX03 1113 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 EXOC6Q8TAG9 804 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 PTPRGP23470 1445 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 KIF15Q9NS87 1388 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 MINK1Q8N4C8 1332 aaPredicted RBP5.98□□□□□ -1.45
RAP1B-201ENST00000250559 FRAT2O75474 233 aaPredicted RBP5.98□□□□□ -1.45
RAP1B-201ENST00000250559 KCNJ4P48050 445 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 RALBP1Q15311 655 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 BICDL1Q6ZP65 573 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 PMFBP1Q8TBY8 1022 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 PDE3BQ13370 1112 aa5.98□□□□□ -1.45
RAP1B-201ENST00000250559 DNTTIP2Q5QJE6 756 aaKnown RBP5.97□□□□□ -1.45
RAP1B-201ENST00000250559 NECTIN2Q92692 538 aa5.97□□□□□ -1.45
RAP1B-201ENST00000250559 RBM42Q9BTD8 480 aaKnown RBP5.97□□□□□ -1.45
RAP1B-201ENST00000250559 MYOM3Q5VTT5 1437 aa5.97□□□□□ -1.45
RAP1B-201ENST00000250559 CFTRP13569 1480 aa5.97□□□□□ -1.45
RAP1B-201ENST00000250559 TXNDC2Q86VQ3 553 aa5.97□□□□□ -1.45
RAP1B-201ENST00000250559 SLKQ9H2G2 1235 aaPredicted RBP5.97□□□□□ -1.45
RAP1B-201ENST00000250559 C16orf71Q8IYS4 520 aaPredicted RBP5.97□□□□□ -1.45
RAP1B-201ENST00000250559 DEKP35659 375 aaKnown RBP5.97□□□□□ -1.45
RAP1B-201ENST00000250559 TMEM132EQ6IEE7 984 aa5.97□□□□□ -1.45
RAP1B-201ENST00000250559 CDK13Q14004 1512 aaKnown RBP5.96□□□□□ -1.45
RAP1B-201ENST00000250559 GOLGA6L22H0YM25 854 aa5.96□□□□□ -1.46
RAP1B-201ENST00000250559 PTMAP06454 111 aaKnown RBP5.96□□□□□ -1.46
RAP1B-201ENST00000250559 CRBNQ96SW2 442 aa5.96□□□□□ -1.46
RAP1B-201ENST00000250559 CHMP4BP1P59074 171 aa5.96□□□□□ -1.46
RAP1B-201ENST00000250559 NLRP2Q9NX02 1062 aa5.96□□□□□ -1.46
RAP1B-201ENST00000250559 POLA1P09884 1462 aaPredicted RBP5.96□□□□□ -1.46
RAP1B-201ENST00000250559 NCAPD3P42695 1498 aa5.96□□□□□ -1.46
RAP1B-201ENST00000250559 FYCO1Q9BQS8 1478 aa5.96□□□□□ -1.46
RAP1B-201ENST00000250559 UACAQ9BZF9 1416 aa5.96□□□□□ -1.46
RAP1B-201ENST00000250559 AMPHP49418 695 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 HSCBQ8IWL3 235 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 ZC3H6P61129 1189 aaKnown RBP5.95□□□□□ -1.46
RAP1B-201ENST00000250559 APAF1O14727 1248 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 PRG4Q92954 1404 aaPredicted RBP5.95□□□□□ -1.46
RAP1B-201ENST00000250559 WASHC2AQ641Q2 1341 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 ARHGAP5Q13017 1502 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 ZRSR1Q15695 479 aaKnown RBP5.95□□□□□ -1.46
RAP1B-201ENST00000250559 TERF2IPQ9NYB0 399 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 PHF14O94880 888 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 FGD1P98174 961 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 GPR162Q16538 588 aa5.95□□□□□ -1.46
RAP1B-201ENST00000250559 MYCP01106 439 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms