RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 NAIPQ13075 1403 aa11.85□□□□□ -0.51
COL21A1-201ENST00000244728 RRP7AQ9Y3A4 280 aaKnown RBP11.85□□□□□ -0.51
COL21A1-201ENST00000244728 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
COL21A1-201ENST00000244728 AFAP1Q8N556 730 aa11.84□□□□□ -0.51
COL21A1-201ENST00000244728 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
COL21A1-201ENST00000244728 APBB1O00213 710 aa11.83□□□□□ -0.52
COL21A1-201ENST00000244728 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
COL21A1-201ENST00000244728 FAM161AQ3B820 660 aa11.83□□□□□ -0.52
COL21A1-201ENST00000244728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL21A1-201ENST00000244728 NFKBIBQ15653 356 aa11.83□□□□□ -0.52
COL21A1-201ENST00000244728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL21A1-201ENST00000244728 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
COL21A1-201ENST00000244728 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
COL21A1-201ENST00000244728 GZF1Q9H116 711 aaPredicted RBP11.82□□□□□ -0.52
COL21A1-201ENST00000244728 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
COL21A1-201ENST00000244728 CENPQQ7L2Z9 268 aaPredicted RBP11.82□□□□□ -0.52
COL21A1-201ENST00000244728 BRPF3Q9ULD4 1205 aa11.82□□□□□ -0.52
COL21A1-201ENST00000244728 PCF11O94913 1555 aaKnown RBP11.81□□□□□ -0.52
COL21A1-201ENST00000244728 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
COL21A1-201ENST00000244728 HDGFL2Q7Z4V5 671 aaPredicted RBP11.81□□□□□ -0.52
COL21A1-201ENST00000244728 BACH2Q9BYV9 841 aa11.81□□□□□ -0.52
COL21A1-201ENST00000244728 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
COL21A1-201ENST00000244728 BCL2L13Q9BXK5 485 aa11.79□□□□□ -0.52
COL21A1-201ENST00000244728 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
COL21A1-201ENST00000244728 PRKCSHP14314 528 aaPredicted RBP11.78□□□□□ -0.52
COL21A1-201ENST00000244728 BRD4O60885 1362 aaPredicted RBP11.77□□□□□ -0.53
COL21A1-201ENST00000244728 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.53
COL21A1-201ENST00000244728 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
COL21A1-201ENST00000244728 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.53
COL21A1-201ENST00000244728 GOLGA6L22H0YM25 854 aa11.76□□□□□ -0.53
COL21A1-201ENST00000244728 MINK1Q8N4C8 1332 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-201ENST00000244728 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-201ENST00000244728 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
COL21A1-201ENST00000244728 TAOK2Q9UL54 1235 aa11.76□□□□□ -0.53
COL21A1-201ENST00000244728 TMEM132EQ6IEE7 984 aa11.75□□□□□ -0.53
COL21A1-201ENST00000244728 HSCBQ8IWL3 235 aa11.75□□□□□ -0.53
COL21A1-201ENST00000244728 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
COL21A1-201ENST00000244728 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
COL21A1-201ENST00000244728 SKAP1Q86WV1 359 aa11.75□□□□□ -0.53
COL21A1-201ENST00000244728 LTV1Q96GA3 475 aaPredicted RBP11.75□□□□□ -0.53
COL21A1-201ENST00000244728 PEG3Q9GZU2 1588 aa11.75□□□□□ -0.53
COL21A1-201ENST00000244728 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
COL21A1-201ENST00000244728 NCOA1Q15788 1441 aa11.75□□□□□ -0.53
COL21A1-201ENST00000244728 APAF1O14727 1248 aa11.74□□□□□ -0.53
COL21A1-201ENST00000244728 HSP90AB1P08238 724 aaKnown RBP11.74□□□□□ -0.53
COL21A1-201ENST00000244728 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
COL21A1-201ENST00000244728 TOPBP1Q92547 1522 aa11.73□□□□□ -0.53
COL21A1-201ENST00000244728 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
COL21A1-201ENST00000244728 ANKRD50Q9ULJ7 1429 aa11.73□□□□□ -0.53
COL21A1-201ENST00000244728 FRAT2O75474 233 aaPredicted RBP11.73□□□□□ -0.53
COL21A1-201ENST00000244728 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
COL21A1-201ENST00000244728 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
COL21A1-201ENST00000244728 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
COL21A1-201ENST00000244728 PTPRKQ15262 1439 aa11.72□□□□□ -0.53
COL21A1-201ENST00000244728 PRG4Q92954 1404 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-201ENST00000244728 RTF1Q92541 710 aaKnown RBP11.72□□□□□ -0.53
COL21A1-201ENST00000244728 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
COL21A1-201ENST00000244728 OS9Q13438 667 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-201ENST00000244728 CENPJQ9HC77 1338 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-201ENST00000244728 SMC4Q9NTJ3 1288 aa11.72□□□□□ -0.53
COL21A1-201ENST00000244728 PTPN23Q9H3S7 1636 aa11.71□□□□□ -0.53
COL21A1-201ENST00000244728 NGDNQ8NEJ9 315 aaKnown RBP11.71□□□□□ -0.53
COL21A1-201ENST00000244728 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
COL21A1-201ENST00000244728 COG6Q9Y2V7 657 aa11.71□□□□□ -0.53
COL21A1-201ENST00000244728 EHBP1L1Q8N3D4 1523 aa11.71□□□□□ -0.54
COL21A1-201ENST00000244728 GRIN2BQ13224 1484 aa11.71□□□□□ -0.54
COL21A1-201ENST00000244728 FAM69CQ0P6D2 419 aa11.7□□□□□ -0.54
COL21A1-201ENST00000244728 RWDD1Q9H446 243 aaPredicted RBP11.7□□□□□ -0.54
COL21A1-201ENST00000244728 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
COL21A1-201ENST00000244728 PMFBP1Q8TBY8 1022 aa11.7□□□□□ -0.54
COL21A1-201ENST00000244728 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
COL21A1-201ENST00000244728 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
COL21A1-201ENST00000244728 EIF3AQ14152 1382 aaKnown RBP11.69□□□□□ -0.54
COL21A1-201ENST00000244728 ANKRD30BQ9BXX2 1392 aa11.69□□□□□ -0.54
COL21A1-201ENST00000244728 SUPT6HQ7KZ85 1726 aaKnown RBP11.68□□□□□ -0.54
COL21A1-201ENST00000244728 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
COL21A1-201ENST00000244728 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
COL21A1-201ENST00000244728 MIA2Q96PC5 1412 aa11.67□□□□□ -0.54
COL21A1-201ENST00000244728 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
COL21A1-201ENST00000244728 SLC4A10Q6U841 1118 aa11.67□□□□□ -0.54
COL21A1-201ENST00000244728 CGNL1Q0VF96 1302 aa11.66□□□□□ -0.54
COL21A1-201ENST00000244728 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
COL21A1-201ENST00000244728 E9PSI1 815 aa11.66□□□□□ -0.54
COL21A1-201ENST00000244728 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
COL21A1-201ENST00000244728 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
COL21A1-201ENST00000244728 KIAA1107Q9UPP5 1409 aa11.65□□□□□ -0.54
COL21A1-201ENST00000244728 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.54
COL21A1-201ENST00000244728 AMPHP49418 695 aa11.65□□□□□ -0.54
COL21A1-201ENST00000244728 GGNBP2Q9H3C7 697 aa11.64□□□□□ -0.55
COL21A1-201ENST00000244728 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
COL21A1-201ENST00000244728 KCNJ4P48050 445 aa11.64□□□□□ -0.55
COL21A1-201ENST00000244728 DAPK1P53355 1430 aa11.64□□□□□ -0.55
COL21A1-201ENST00000244728 C20orf194Q5TEA3 1177 aa11.64□□□□□ -0.55
COL21A1-201ENST00000244728 GBP4Q96PP9 640 aa11.64□□□□□ -0.55
COL21A1-201ENST00000244728 CABP2Q9NPB3 220 aa11.64□□□□□ -0.55
COL21A1-201ENST00000244728 RAPGEF3O95398 923 aa11.63□□□□□ -0.55
COL21A1-201ENST00000244728 MSNP26038 577 aaKnown RBP11.63□□□□□ -0.55
COL21A1-201ENST00000244728 PANK1Q8TE04 598 aa11.63□□□□□ -0.55
COL21A1-201ENST00000244728 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
COL21A1-201ENST00000244728 EVC2Q86UK5 1308 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms