RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CROCC2H7BZ55 1655 aa12.33□□□□□ -0.44
SYDE2-201ENST00000234668 CCDC141Q6ZP82 1450 aa12.33□□□□□ -0.44
SYDE2-201ENST00000234668 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
SYDE2-201ENST00000234668 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
SYDE2-201ENST00000234668 PANK3Q9H999 370 aa12.33□□□□□ -0.44
SYDE2-201ENST00000234668 RALGAPBQ86X10 1494 aa12.33□□□□□ -0.44
SYDE2-201ENST00000234668 SAMD9LQ8IVG5 1584 aa12.32□□□□□ -0.44
SYDE2-201ENST00000234668 UHRF1BP1Q6BDS2 1440 aa12.32□□□□□ -0.44
SYDE2-201ENST00000234668 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
SYDE2-201ENST00000234668 PLA2R1Q13018 1463 aa12.31□□□□□ -0.44
SYDE2-201ENST00000234668 MYBBP1AQ9BQG0 1328 aaKnown RBP12.31□□□□□ -0.44
SYDE2-201ENST00000234668 RSPH4AQ5TD94 716 aa12.31□□□□□ -0.44
SYDE2-201ENST00000234668 DISP3Q9P2K9 1392 aa12.3□□□□□ -0.44
SYDE2-201ENST00000234668 SHANK2Q9UPX8 1470 aa12.3□□□□□ -0.44
SYDE2-201ENST00000234668 PER1O15534 1290 aaPredicted RBP12.29□□□□□ -0.44
SYDE2-201ENST00000234668 ARID4BQ4LE39 1312 aaPredicted RBP12.29□□□□□ -0.44
SYDE2-201ENST00000234668 CDC42BPBQ9Y5S2 1711 aa12.29□□□□□ -0.44
SYDE2-201ENST00000234668 SMG6Q86US8 1419 aaKnown RBP12.29□□□□□ -0.44
SYDE2-201ENST00000234668 PLIN1O60240 522 aa12.29□□□□□ -0.44
SYDE2-201ENST00000234668 EFCAB2Q5VUJ9 269 aa12.29□□□□□ -0.44
SYDE2-201ENST00000234668 TESK2Q96S53 571 aa12.29□□□□□ -0.44
SYDE2-201ENST00000234668 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
SYDE2-201ENST00000234668 RALBP1Q15311 655 aa12.28□□□□□ -0.44
SYDE2-201ENST00000234668 ARHGEF12Q9NZN5 1544 aa12.28□□□□□ -0.44
SYDE2-201ENST00000234668 TTC37Q6PGP7 1564 aa12.28□□□□□ -0.44
SYDE2-201ENST00000234668 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
SYDE2-201ENST00000234668 ERICH6BQ5W0A0 696 aa12.28□□□□□ -0.44
SYDE2-201ENST00000234668 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
SYDE2-201ENST00000234668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.45
SYDE2-201ENST00000234668 EXOC6Q8TAG9 804 aa12.27□□□□□ -0.45
SYDE2-201ENST00000234668 NLRP13Q86W25 1043 aa12.26□□□□□ -0.45
SYDE2-201ENST00000234668 TRAPPC8Q9Y2L5 1435 aa12.26□□□□□ -0.45
SYDE2-201ENST00000234668 A2MP01023 1474 aa12.26□□□□□ -0.45
SYDE2-201ENST00000234668 SKAP1Q86WV1 359 aa12.26□□□□□ -0.45
SYDE2-201ENST00000234668 KTN1Q86UP2 1357 aaKnown RBP12.26□□□□□ -0.45
SYDE2-201ENST00000234668 SPAG9O60271 1321 aaKnown RBP12.25□□□□□ -0.45
SYDE2-201ENST00000234668 CHD1O14646 1710 aa12.24□□□□□ -0.45
SYDE2-201ENST00000234668 TMF1P82094 1093 aa12.24□□□□□ -0.45
SYDE2-201ENST00000234668 KIF3BO15066 747 aa12.24□□□□□ -0.45
SYDE2-201ENST00000234668 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
SYDE2-201ENST00000234668 BRD4O60885 1362 aaPredicted RBP12.23□□□□□ -0.45
SYDE2-201ENST00000234668 ARHGEF5Q12774 1597 aa12.23□□□□□ -0.45
SYDE2-201ENST00000234668 KDM5DQ9BY66 1539 aa12.23□□□□□ -0.45
SYDE2-201ENST00000234668 POLR1AO95602 1720 aaPredicted RBP12.22□□□□□ -0.45
SYDE2-201ENST00000234668 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
SYDE2-201ENST00000234668 LRPPRCP42704 1394 aaKnown RBP12.22□□□□□ -0.45
SYDE2-201ENST00000234668 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
SYDE2-201ENST00000234668 ADAMTS8Q9UP79 889 aa12.21□□□□□ -0.45
SYDE2-201ENST00000234668 PREX2Q70Z35 1606 aa12.21□□□□□ -0.45
SYDE2-201ENST00000234668 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.45
SYDE2-201ENST00000234668 RNF123Q5XPI4 1314 aa12.2□□□□□ -0.46
SYDE2-201ENST00000234668 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
SYDE2-201ENST00000234668 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
SYDE2-201ENST00000234668 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
SYDE2-201ENST00000234668 PARD3Q8TEW0 1356 aa12.19□□□□□ -0.46
SYDE2-201ENST00000234668 KNSTRNQ9Y448 316 aa12.19□□□□□ -0.46
SYDE2-201ENST00000234668 CFAP70Q5T0N1 1121 aa12.19□□□□□ -0.46
SYDE2-201ENST00000234668 PLCH2O75038 1416 aa12.19□□□□□ -0.46
SYDE2-201ENST00000234668 CCDC146Q8IYE0 955 aa12.18□□□□□ -0.46
SYDE2-201ENST00000234668 NBR1Q14596 966 aa12.18□□□□□ -0.46
SYDE2-201ENST00000234668 ABCC2Q92887 1545 aa12.18□□□□□ -0.46
SYDE2-201ENST00000234668 NUTM2DQ5VT03 806 aaPredicted RBP12.17□□□□□ -0.46
SYDE2-201ENST00000234668 C20orf194Q5TEA3 1177 aa12.16□□□□□ -0.46
SYDE2-201ENST00000234668 SCAPERQ9BY12 1400 aa12.16□□□□□ -0.46
SYDE2-201ENST00000234668 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.46
SYDE2-201ENST00000234668 TNNT2P45379 298 aaPredicted RBP12.15□□□□□ -0.46
SYDE2-201ENST00000234668 GPRASP1Q5JY77 1395 aa12.15□□□□□ -0.46
SYDE2-201ENST00000234668 PPP2R1AP30153 589 aa12.15□□□□□ -0.46
SYDE2-201ENST00000234668 CRBNQ96SW2 442 aa12.14□□□□□ -0.47
SYDE2-201ENST00000234668 ADGRF5Q8IZF2 1346 aa12.14□□□□□ -0.47
SYDE2-201ENST00000234668 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
SYDE2-201ENST00000234668 WDR43Q15061 677 aaKnown RBP eCLIP12.13□□□□□ -0.47
SYDE2-201ENST00000234668 GGT6Q6P531 493 aa12.13□□□□□ -0.47
SYDE2-201ENST00000234668 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
SYDE2-201ENST00000234668 MAGI2Q86UL8 1455 aa12.13□□□□□ -0.47
SYDE2-201ENST00000234668 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
SYDE2-201ENST00000234668 MYO5CQ9NQX4 1742 aa12.12□□□□□ -0.47
SYDE2-201ENST00000234668 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
SYDE2-201ENST00000234668 TRAK1Q9UPV9 953 aa12.11□□□□□ -0.47
SYDE2-201ENST00000234668 NOP58Q9Y2X3 529 aaKnown RBP12.1□□□□□ -0.47
SYDE2-201ENST00000234668 ZCCHC11Q5TAX3 1644 aaKnown RBP12.1□□□□□ -0.47
SYDE2-201ENST00000234668 UNC13BO14795 1591 aa12.1□□□□□ -0.47
SYDE2-201ENST00000234668 UGGT1Q9NYU2 1555 aa12.09□□□□□ -0.47
SYDE2-201ENST00000234668 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
SYDE2-201ENST00000234668 NEUROD2Q15784 382 aa12.09□□□□□ -0.47
SYDE2-201ENST00000234668 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
SYDE2-201ENST00000234668 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
SYDE2-201ENST00000234668 PLEKHH1Q9ULM0 1364 aa12.08□□□□□ -0.47
SYDE2-201ENST00000234668 APAF1O14727 1248 aa12.08□□□□□ -0.47
SYDE2-201ENST00000234668 SHROOM2Q13796 1616 aa12.08□□□□□ -0.47
SYDE2-201ENST00000234668 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.47
SYDE2-201ENST00000234668 ATP10AO60312 1499 aa12.08□□□□□ -0.48
SYDE2-201ENST00000234668 ANP32AP39687 249 aaKnown RBP12.08□□□□□ -0.48
SYDE2-201ENST00000234668 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
SYDE2-201ENST00000234668 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
SYDE2-201ENST00000234668 MAST1Q9Y2H9 1570 aa12.08□□□□□ -0.48
SYDE2-201ENST00000234668 WDR7Q9Y4E6 1490 aa12.07□□□□□ -0.48
SYDE2-201ENST00000234668 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
SYDE2-201ENST00000234668 E9PCH4 1651 aa12.07□□□□□ -0.48
SYDE2-201ENST00000234668 FANCAO15360 1455 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms