RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 LEKR1Q6ZMV7 388 aa16.84■□□□□ 0.29
SIPA1L3-201ENST00000222345 ZBED9Q6R2W3 1325 aa16.84■□□□□ 0.29
SIPA1L3-201ENST00000222345 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.29
SIPA1L3-201ENST00000222345 USP8P40818 1118 aa16.83■□□□□ 0.29
SIPA1L3-201ENST00000222345 MORC1Q86VD1 984 aa16.83■□□□□ 0.28
SIPA1L3-201ENST00000222345 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.28
SIPA1L3-201ENST00000222345 NASPP49321 788 aaPredicted RBP16.83■□□□□ 0.28
SIPA1L3-201ENST00000222345 TRIM6-TRIM34B2RNG4 842 aa16.83■□□□□ 0.28
SIPA1L3-201ENST00000222345 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
SIPA1L3-201ENST00000222345 MNS1Q8NEH6 495 aa16.82■□□□□ 0.28
SIPA1L3-201ENST00000222345 POGKQ9P215 609 aa16.82■□□□□ 0.28
SIPA1L3-201ENST00000222345 HOOK1Q9UJC3 728 aaKnown RBP16.82■□□□□ 0.28
SIPA1L3-201ENST00000222345 NUCB2P80303 420 aa16.82■□□□□ 0.28
SIPA1L3-201ENST00000222345 TSPYL1Q9H0U9 437 aa16.82■□□□□ 0.28
SIPA1L3-201ENST00000222345 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
SIPA1L3-201ENST00000222345 H3BQV1 296 aa16.81■□□□□ 0.28
SIPA1L3-201ENST00000222345 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
SIPA1L3-201ENST00000222345 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
SIPA1L3-201ENST00000222345 ANKRD20A12PQ8NF67 263 aa16.81■□□□□ 0.28
SIPA1L3-201ENST00000222345 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
SIPA1L3-201ENST00000222345 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
SIPA1L3-201ENST00000222345 ARHGAP35Q9NRY4 1499 aa16.79■□□□□ 0.28
SIPA1L3-201ENST00000222345 CCP110O43303 1012 aa16.79■□□□□ 0.28
SIPA1L3-201ENST00000222345 CCDC173Q0VFZ6 552 aa16.79■□□□□ 0.28
SIPA1L3-201ENST00000222345 RASSF8Q8NHQ8 419 aa16.79■□□□□ 0.28
SIPA1L3-201ENST00000222345 LETM1O95202 739 aaPredicted RBP16.78■□□□□ 0.28
SIPA1L3-201ENST00000222345 DHX8Q14562 1220 aaKnown RBP16.78■□□□□ 0.28
SIPA1L3-201ENST00000222345 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
SIPA1L3-201ENST00000222345 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
SIPA1L3-201ENST00000222345 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.28
SIPA1L3-201ENST00000222345 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
SIPA1L3-201ENST00000222345 KIF27Q86VH2 1401 aa16.77■□□□□ 0.28
SIPA1L3-201ENST00000222345 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.28
SIPA1L3-201ENST00000222345 EIF3AQ14152 1382 aaKnown RBP16.77■□□□□ 0.27
SIPA1L3-201ENST00000222345 NFKBIBQ15653 356 aa16.77■□□□□ 0.27
SIPA1L3-201ENST00000222345 REC8O95072 547 aa16.76■□□□□ 0.27
SIPA1L3-201ENST00000222345 CFDP1Q9UEE9 299 aaPredicted RBP16.76■□□□□ 0.27
SIPA1L3-201ENST00000222345 SOX12O15370 315 aa16.76■□□□□ 0.27
SIPA1L3-201ENST00000222345 DEF6Q9H4E7 631 aa16.76■□□□□ 0.27
SIPA1L3-201ENST00000222345 MLECQ14165 292 aa16.76■□□□□ 0.27
SIPA1L3-201ENST00000222345 KIF15Q9NS87 1388 aa16.75■□□□□ 0.27
SIPA1L3-201ENST00000222345 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
SIPA1L3-201ENST00000222345 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
SIPA1L3-201ENST00000222345 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
SIPA1L3-201ENST00000222345 APBB1O00213 710 aa16.75■□□□□ 0.27
SIPA1L3-201ENST00000222345 NAT10Q9H0A0 1025 aaKnown RBP16.74■□□□□ 0.27
SIPA1L3-201ENST00000222345 RRP1P56182 461 aaKnown RBP16.74■□□□□ 0.27
SIPA1L3-201ENST00000222345 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
SIPA1L3-201ENST00000222345 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
SIPA1L3-201ENST00000222345 PES1O00541 588 aaKnown RBP16.73■□□□□ 0.27
SIPA1L3-201ENST00000222345 MYO6Q9UM54 1294 aa16.73■□□□□ 0.27
SIPA1L3-201ENST00000222345 SASS6Q6UVJ0 657 aa16.73■□□□□ 0.27
SIPA1L3-201ENST00000222345 AAMPQ13685 434 aa16.73■□□□□ 0.27
SIPA1L3-201ENST00000222345 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
SIPA1L3-201ENST00000222345 KANK1Q14678 1352 aa16.72■□□□□ 0.27
SIPA1L3-201ENST00000222345 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
SIPA1L3-201ENST00000222345 ERCC6Q03468 1493 aa16.71■□□□□ 0.27
SIPA1L3-201ENST00000222345 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.26
SIPA1L3-201ENST00000222345 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
SIPA1L3-201ENST00000222345 INCENPQ9NQS7 918 aa16.69■□□□□ 0.26
SIPA1L3-201ENST00000222345 VPS8Q8N3P4 1428 aa16.69■□□□□ 0.26
SIPA1L3-201ENST00000222345 GOLGA6L7A0A1B0GV03 622 aa16.69■□□□□ 0.26
SIPA1L3-201ENST00000222345 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
SIPA1L3-201ENST00000222345 LMOD3Q0VAK6 560 aa16.69■□□□□ 0.26
SIPA1L3-201ENST00000222345 KIAA0754O94854 1291 aa16.68■□□□□ 0.26
SIPA1L3-201ENST00000222345 PDCL2Q8N4E4 241 aa16.68■□□□□ 0.26
SIPA1L3-201ENST00000222345 PRM3Q9NNZ6 103 aa16.68■□□□□ 0.26
SIPA1L3-201ENST00000222345 TAF7LQ5H9L4 462 aa16.68■□□□□ 0.26
SIPA1L3-201ENST00000222345 MBD3O95983 291 aa16.67■□□□□ 0.26
SIPA1L3-201ENST00000222345 FOXD4L5Q5VV16 416 aaPredicted RBP16.67■□□□□ 0.26
SIPA1L3-201ENST00000222345 FOXD4L4Q8WXT5 416 aaPredicted RBP16.67■□□□□ 0.26
SIPA1L3-201ENST00000222345 STK11IPQ8N1F8 1099 aa16.67■□□□□ 0.26
SIPA1L3-201ENST00000222345 MYBBP1AQ9BQG0 1328 aaKnown RBP16.67■□□□□ 0.26
SIPA1L3-201ENST00000222345 SLC4A3P48751 1232 aa16.67■□□□□ 0.26
SIPA1L3-201ENST00000222345 UBE2Q2Q8WVN8 375 aa16.66■□□□□ 0.26
SIPA1L3-201ENST00000222345 NOL8Q76FK4 1167 aaKnown RBP16.66■□□□□ 0.26
SIPA1L3-201ENST00000222345 NGEFQ8N5V2 710 aa16.66■□□□□ 0.26
SIPA1L3-201ENST00000222345 CCDC47Q96A33 483 aaKnown RBP16.66■□□□□ 0.26
SIPA1L3-201ENST00000222345 EIF3JO75822 258 aaKnown RBP16.65■□□□□ 0.26
SIPA1L3-201ENST00000222345 CAGE1Q8TC20 777 aa16.65■□□□□ 0.26
SIPA1L3-201ENST00000222345 U2AF1L5P0DN76 240 aaPredicted RBP16.65■□□□□ 0.26
SIPA1L3-201ENST00000222345 U2AF1Q01081 240 aaKnown RBP eCLIP16.65■□□□□ 0.26
SIPA1L3-201ENST00000222345 HSP90AB3PQ58FF7 597 aa16.64■□□□□ 0.26
SIPA1L3-201ENST00000222345 RUFY2Q8WXA3 655 aa16.64■□□□□ 0.26
SIPA1L3-201ENST00000222345 NEXNQ0ZGT2 675 aa16.64■□□□□ 0.25
SIPA1L3-201ENST00000222345 LRRFIP1Q32MZ4 808 aaKnown RBP16.64■□□□□ 0.25
SIPA1L3-201ENST00000222345 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
SIPA1L3-201ENST00000222345 TRAK2O60296 914 aa16.64■□□□□ 0.25
SIPA1L3-201ENST00000222345 ROCK1Q13464 1354 aa16.63■□□□□ 0.25
SIPA1L3-201ENST00000222345 E9PSI1 815 aa16.63■□□□□ 0.25
SIPA1L3-201ENST00000222345 RAB3GAP2Q9H2M9 1393 aa16.63■□□□□ 0.25
SIPA1L3-201ENST00000222345 GORABQ5T7V8 394 aa16.63■□□□□ 0.25
SIPA1L3-201ENST00000222345 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
SIPA1L3-201ENST00000222345 KIF7Q2M1P5 1343 aa16.62■□□□□ 0.25
SIPA1L3-201ENST00000222345 CPLX2Q6PUV4 134 aaKnown RBP16.62■□□□□ 0.25
SIPA1L3-201ENST00000222345 BICD2Q8TD16 824 aa16.62■□□□□ 0.25
SIPA1L3-201ENST00000222345 DYDC1Q8WWB3 177 aa16.61■□□□□ 0.25
SIPA1L3-201ENST00000222345 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
SIPA1L3-201ENST00000222345 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
SIPA1L3-201ENST00000222345 RNF20Q5VTR2 975 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms