RNA–Protein interactions for RNA: ENST00000217260.8

RSPO4-201, Transcript of R-spondin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO4, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-201ENST00000217260 FAM135AQ9P2D6 1515 aa24.92■■□□□ 1.58
RSPO4-201ENST00000217260 SMG6Q86US8 1419 aaKnown RBP24.87■■□□□ 1.57
RSPO4-201ENST00000217260 TMC1Q8TDI8 760 aa24.86■■□□□ 1.57
RSPO4-201ENST00000217260 SYCP2Q9BX26 1530 aa24.86■■□□□ 1.57
RSPO4-201ENST00000217260 PNISRQ8TF01 805 aaKnown RBP24.85■■□□□ 1.57
RSPO4-201ENST00000217260 B4GALNT3Q6L9W6 998 aa24.85■■□□□ 1.57
RSPO4-201ENST00000217260 CCDC144AA2RUR9 1427 aa24.84■■□□□ 1.57
RSPO4-201ENST00000217260 ARHGAP5Q13017 1502 aa24.84■■□□□ 1.57
RSPO4-201ENST00000217260 CHD1O14646 1710 aa24.83■■□□□ 1.57
RSPO4-201ENST00000217260 TTC37Q6PGP7 1564 aa24.83■■□□□ 1.57
RSPO4-201ENST00000217260 NUDCQ9Y266 331 aa24.83■■□□□ 1.56
RSPO4-201ENST00000217260 DEKP35659 375 aaKnown RBP24.82■■□□□ 1.56
RSPO4-201ENST00000217260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.81■■□□□ 1.56
RSPO4-201ENST00000217260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.8■■□□□ 1.56
RSPO4-201ENST00000217260 MAST1Q9Y2H9 1570 aa24.8■■□□□ 1.56
RSPO4-201ENST00000217260 PRAG1Q86YV5 1406 aa24.8■■□□□ 1.56
RSPO4-201ENST00000217260 RGL3Q3MIN7 710 aa24.79■■□□□ 1.56
RSPO4-201ENST00000217260 UNC13BO14795 1591 aa24.78■■□□□ 1.56
RSPO4-201ENST00000217260 KTN1Q86UP2 1357 aaKnown RBP24.77■■□□□ 1.56
RSPO4-201ENST00000217260 TRPM1Q7Z4N2 1603 aa24.77■■□□□ 1.56
RSPO4-201ENST00000217260 RALBP1Q15311 655 aa24.77■■□□□ 1.56
RSPO4-201ENST00000217260 MYBBP1AQ9BQG0 1328 aaKnown RBP24.77■■□□□ 1.56
RSPO4-201ENST00000217260 SHROOM2Q13796 1616 aa24.77■■□□□ 1.56
RSPO4-201ENST00000217260 SENP3-EIF4A1A0A087X0R7 540 aa24.77■■□□□ 1.56
RSPO4-201ENST00000217260 PLA2R1Q13018 1463 aa24.76■■□□□ 1.55
RSPO4-201ENST00000217260 E9PCH4 1651 aa24.76■■□□□ 1.55
RSPO4-201ENST00000217260 BRD4O60885 1362 aaPredicted RBP24.76■■□□□ 1.55
RSPO4-201ENST00000217260 NBPF1Q3BBV0 1214 aa24.74■■□□□ 1.55
RSPO4-201ENST00000217260 MYO5CQ9NQX4 1742 aa24.73■■□□□ 1.55
RSPO4-201ENST00000217260 RNF123Q5XPI4 1314 aa24.73■■□□□ 1.55
RSPO4-201ENST00000217260 LRPPRCP42704 1394 aaKnown RBP24.73■■□□□ 1.55
RSPO4-201ENST00000217260 PLEKHH2Q8IVE3 1493 aa24.72■■□□□ 1.55
RSPO4-201ENST00000217260 ABCC2Q92887 1545 aa24.72■■□□□ 1.55
RSPO4-201ENST00000217260 PLXNC1O60486 1568 aa24.72■■□□□ 1.55
RSPO4-201ENST00000217260 A2MP01023 1474 aa24.71■■□□□ 1.55
RSPO4-201ENST00000217260 ERCC6L2Q5T890 1561 aa24.7■■□□□ 1.55
RSPO4-201ENST00000217260 IQGAP3Q86VI3 1631 aa24.7■■□□□ 1.54
RSPO4-201ENST00000217260 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
RSPO4-201ENST00000217260 DUOX2Q9NRD8 1548 aa24.67■■□□□ 1.54
RSPO4-201ENST00000217260 NOP58Q9Y2X3 529 aaKnown RBP24.66■■□□□ 1.54
RSPO4-201ENST00000217260 NLRP13Q86W25 1043 aa24.64■■□□□ 1.53
RSPO4-201ENST00000217260 PARD3Q8TEW0 1356 aa24.63■■□□□ 1.53
RSPO4-201ENST00000217260 PER1O15534 1290 aaPredicted RBP24.63■■□□□ 1.53
RSPO4-201ENST00000217260 ERBINQ96RT1 1412 aa24.62■■□□□ 1.53
RSPO4-201ENST00000217260 LAMC1P11047 1609 aa24.62■■□□□ 1.53
RSPO4-201ENST00000217260 PRDM15P57071 1507 aaPredicted RBP24.62■■□□□ 1.53
RSPO4-201ENST00000217260 PLCH2O75038 1416 aa24.62■■□□□ 1.53
RSPO4-201ENST00000217260 TESK2Q96S53 571 aa24.61■■□□□ 1.53
RSPO4-201ENST00000217260 ATP10AO60312 1499 aa24.61■■□□□ 1.53
RSPO4-201ENST00000217260 MAGI2Q86UL8 1455 aa24.61■■□□□ 1.53
RSPO4-201ENST00000217260 COL17A1Q9UMD9 1497 aaPredicted RBP24.61■■□□□ 1.53
RSPO4-201ENST00000217260 CCDC136Q96JN2 1154 aa24.61■■□□□ 1.53
RSPO4-201ENST00000217260 NBR1Q14596 966 aa24.6■■□□□ 1.53
RSPO4-201ENST00000217260 EFCAB2Q5VUJ9 269 aa24.6■■□□□ 1.53
RSPO4-201ENST00000217260 DISP3Q9P2K9 1392 aa24.6■■□□□ 1.53
RSPO4-201ENST00000217260 EIF2AK4Q9P2K8 1649 aaKnown RBP24.59■■□□□ 1.53
RSPO4-201ENST00000217260 ZCCHC11Q5TAX3 1644 aaKnown RBP24.56■■□□□ 1.52
RSPO4-201ENST00000217260 WASHC2CQ9Y4E1 1318 aa24.55■■□□□ 1.52
RSPO4-201ENST00000217260 PRKCSHP14314 528 aaPredicted RBP24.54■■□□□ 1.52
RSPO4-201ENST00000217260 TMF1P82094 1093 aa24.54■■□□□ 1.52
RSPO4-201ENST00000217260 ABCC1P33527 1531 aa24.54■■□□□ 1.52
RSPO4-201ENST00000217260 TRAPPC8Q9Y2L5 1435 aa24.53■■□□□ 1.52
RSPO4-201ENST00000217260 CC2D1BQ5T0F9 858 aaKnown RBP24.53■■□□□ 1.52
RSPO4-201ENST00000217260 PANK3Q9H999 370 aa24.53■■□□□ 1.52
RSPO4-201ENST00000217260 SALL2Q9Y467 1007 aaPredicted RBP24.53■■□□□ 1.52
RSPO4-201ENST00000217260 PAK3O75914 559 aaPredicted RBP24.52■■□□□ 1.52
RSPO4-201ENST00000217260 UHRF1BP1LA0JNW5 1464 aa24.5■■□□□ 1.51
RSPO4-201ENST00000217260 RRP1P56182 461 aaKnown RBP24.48■■□□□ 1.51
RSPO4-201ENST00000217260 PDE3BQ13370 1112 aa24.48■■□□□ 1.51
RSPO4-201ENST00000217260 RCAN3Q9UKA8 241 aa24.47■■□□□ 1.51
RSPO4-201ENST00000217260 SPAG9O60271 1321 aaKnown RBP24.47■■□□□ 1.51
RSPO4-201ENST00000217260 RNF17Q9BXT8 1623 aaKnown RBP24.47■■□□□ 1.51
RSPO4-201ENST00000217260 ANP32AP39687 249 aaKnown RBP24.45■■□□□ 1.5
RSPO4-201ENST00000217260 AFAP1Q8N556 730 aa24.45■■□□□ 1.5
RSPO4-201ENST00000217260 RTL5Q5HYW3 569 aaPredicted RBP24.44■■□□□ 1.5
RSPO4-201ENST00000217260 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
RSPO4-201ENST00000217260 RTEL1-TNFRSF6BF6WH68 1400 aa24.42■■□□□ 1.5
RSPO4-201ENST00000217260 IPO9Q96P70 1041 aaKnown RBP24.41■■□□□ 1.5
RSPO4-201ENST00000217260 MADDQ8WXG6 1647 aa24.41■■□□□ 1.5
RSPO4-201ENST00000217260 CDCA7LQ96GN5 454 aa24.4■■□□□ 1.5
RSPO4-201ENST00000217260 INSRP06213 1382 aa24.4■■□□□ 1.5
RSPO4-201ENST00000217260 EXOC6Q8TAG9 804 aa24.39■■□□□ 1.5
RSPO4-201ENST00000217260 TRPM2O94759 1503 aa24.39■■□□□ 1.5
RSPO4-201ENST00000217260 ZFYVE16Q7Z3T8 1539 aa24.39■■□□□ 1.5
RSPO4-201ENST00000217260 BLMP54132 1417 aaPredicted RBP24.39■■□□□ 1.49
RSPO4-201ENST00000217260 ZMYM4Q5VZL5 1548 aa24.38■■□□□ 1.49
RSPO4-201ENST00000217260 ZBTB47Q9UFB7 747 aaPredicted RBP24.38■■□□□ 1.49
RSPO4-201ENST00000217260 ARAP3Q8WWN8 1544 aa24.37■■□□□ 1.49
RSPO4-201ENST00000217260 IQGAP1P46940 1657 aa24.36■■□□□ 1.49
RSPO4-201ENST00000217260 WDR7Q9Y4E6 1490 aa24.36■■□□□ 1.49
RSPO4-201ENST00000217260 SPHKAPQ2M3C7 1700 aa24.36■■□□□ 1.49
RSPO4-201ENST00000217260 PTPRTO14522 1441 aa24.36■■□□□ 1.49
RSPO4-201ENST00000217260 CEP152O94986 1710 aa24.35■■□□□ 1.49
RSPO4-201ENST00000217260 STAC3Q96MF2 364 aa24.34■■□□□ 1.49
RSPO4-201ENST00000217260 KNSTRNQ9Y448 316 aa24.34■■□□□ 1.49
RSPO4-201ENST00000217260 CLTCL1P53675 1640 aa24.33■■□□□ 1.49
RSPO4-201ENST00000217260 DEPDC5O75140 1603 aa24.32■■□□□ 1.48
RSPO4-201ENST00000217260 SCAF11Q99590 1463 aaKnown RBP24.32■■□□□ 1.48
RSPO4-201ENST00000217260 CDCA8Q53HL2 280 aa24.31■■□□□ 1.48
RSPO4-201ENST00000217260 SCAPERQ9BY12 1400 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms