RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 MAGI3Q5TCQ9 1506 aa12.74□□□□□ -0.37
CSTF1-201ENST00000217109 PDE3BQ13370 1112 aa12.74□□□□□ -0.37
CSTF1-201ENST00000217109 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
CSTF1-201ENST00000217109 FANCIQ9NVI1 1328 aa12.73□□□□□ -0.37
CSTF1-201ENST00000217109 PPM1GO15355 546 aaPredicted RBP12.73□□□□□ -0.37
CSTF1-201ENST00000217109 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
CSTF1-201ENST00000217109 SYNJ2O15056 1496 aa12.73□□□□□ -0.37
CSTF1-201ENST00000217109 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
CSTF1-201ENST00000217109 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
CSTF1-201ENST00000217109 STK26Q9P289 416 aa12.72□□□□□ -0.37
CSTF1-201ENST00000217109 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
CSTF1-201ENST00000217109 CFAP53Q96M91 514 aa12.71□□□□□ -0.38
CSTF1-201ENST00000217109 DEKP35659 375 aaKnown RBP12.7□□□□□ -0.38
CSTF1-201ENST00000217109 CRBNQ96SW2 442 aa12.7□□□□□ -0.38
CSTF1-201ENST00000217109 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
CSTF1-201ENST00000217109 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
CSTF1-201ENST00000217109 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
CSTF1-201ENST00000217109 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
CSTF1-201ENST00000217109 IPO9Q96P70 1041 aaKnown RBP12.7□□□□□ -0.38
CSTF1-201ENST00000217109 ADAMTS8Q9UP79 889 aa12.7□□□□□ -0.38
CSTF1-201ENST00000217109 ARHGAP5Q13017 1502 aa12.7□□□□□ -0.38
CSTF1-201ENST00000217109 BRD4O60885 1362 aaPredicted RBP12.69□□□□□ -0.38
CSTF1-201ENST00000217109 KIF21AQ7Z4S6 1674 aa12.69□□□□□ -0.38
CSTF1-201ENST00000217109 ESF1Q9H501 851 aaKnown RBP12.69□□□□□ -0.38
CSTF1-201ENST00000217109 UPF2Q9HAU5 1272 aaKnown RBP12.69□□□□□ -0.38
CSTF1-201ENST00000217109 ABCA5Q8WWZ7 1642 aa12.69□□□□□ -0.38
CSTF1-201ENST00000217109 APAF1O14727 1248 aa12.68□□□□□ -0.38
CSTF1-201ENST00000217109 MSH5O43196 834 aa12.68□□□□□ -0.38
CSTF1-201ENST00000217109 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
CSTF1-201ENST00000217109 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
CSTF1-201ENST00000217109 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
CSTF1-201ENST00000217109 WDR62O43379 1518 aa12.67□□□□□ -0.38
CSTF1-201ENST00000217109 DDRGK1Q96HY6 314 aa12.67□□□□□ -0.38
CSTF1-201ENST00000217109 POGKQ9P215 609 aa12.67□□□□□ -0.38
CSTF1-201ENST00000217109 SRPK2P78362 688 aaKnown RBP12.67□□□□□ -0.38
CSTF1-201ENST00000217109 PDE4AP27815 886 aa12.66□□□□□ -0.38
CSTF1-201ENST00000217109 CFAP70Q5T0N1 1121 aa12.65□□□□□ -0.38
CSTF1-201ENST00000217109 ARXQ96QS3 562 aa12.65□□□□□ -0.38
CSTF1-201ENST00000217109 ADAMTS12P58397 1594 aa12.65□□□□□ -0.38
CSTF1-201ENST00000217109 SMG6Q86US8 1419 aaKnown RBP12.64□□□□□ -0.39
CSTF1-201ENST00000217109 U2AF1L5P0DN76 240 aaPredicted RBP12.64□□□□□ -0.39
CSTF1-201ENST00000217109 U2AF1Q01081 240 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSTF1-201ENST00000217109 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
CSTF1-201ENST00000217109 DISP1Q96F81 1524 aa12.64□□□□□ -0.39
CSTF1-201ENST00000217109 WASHC2CQ9Y4E1 1318 aa12.64□□□□□ -0.39
CSTF1-201ENST00000217109 RAPGEF6Q8TEU7 1601 aa12.64□□□□□ -0.39
CSTF1-201ENST00000217109 KDM6BO15054 1643 aa12.63□□□□□ -0.39
CSTF1-201ENST00000217109 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
CSTF1-201ENST00000217109 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
CSTF1-201ENST00000217109 ATP10BO94823 1461 aa12.63□□□□□ -0.39
CSTF1-201ENST00000217109 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
CSTF1-201ENST00000217109 MLECQ14165 292 aa12.62□□□□□ -0.39
CSTF1-201ENST00000217109 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
CSTF1-201ENST00000217109 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
CSTF1-201ENST00000217109 MAPK8IP3Q9UPT6 1336 aa12.61□□□□□ -0.39
CSTF1-201ENST00000217109 KIAA0556O60303 1618 aa12.61□□□□□ -0.39
CSTF1-201ENST00000217109 PPP2R1AP30153 589 aa12.61□□□□□ -0.39
CSTF1-201ENST00000217109 TMEM132EQ6IEE7 984 aa12.61□□□□□ -0.39
CSTF1-201ENST00000217109 CCDC141Q6ZP82 1450 aa12.61□□□□□ -0.39
CSTF1-201ENST00000217109 PZPP20742 1482 aa12.6□□□□□ -0.39
CSTF1-201ENST00000217109 SKAP1Q86WV1 359 aa12.6□□□□□ -0.39
CSTF1-201ENST00000217109 TARBP1Q13395 1621 aaKnown RBP12.59□□□□□ -0.39
CSTF1-201ENST00000217109 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
CSTF1-201ENST00000217109 PLEKHH2Q8IVE3 1493 aa12.58□□□□□ -0.4
CSTF1-201ENST00000217109 ERBINQ96RT1 1412 aa12.57□□□□□ -0.4
CSTF1-201ENST00000217109 KIF14Q15058 1648 aa12.57□□□□□ -0.4
CSTF1-201ENST00000217109 TEX14Q8IWB6 1497 aa12.57□□□□□ -0.4
CSTF1-201ENST00000217109 HSP90AA1P07900 732 aaKnown RBP12.57□□□□□ -0.4
CSTF1-201ENST00000217109 COG6Q9Y2V7 657 aa12.57□□□□□ -0.4
CSTF1-201ENST00000217109 CENPJQ9HC77 1338 aaPredicted RBP12.57□□□□□ -0.4
CSTF1-201ENST00000217109 DHX29Q7Z478 1369 aaKnown RBP12.57□□□□□ -0.4
CSTF1-201ENST00000217109 SCAPERQ9BY12 1400 aa12.56□□□□□ -0.4
CSTF1-201ENST00000217109 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
CSTF1-201ENST00000217109 PBRM1Q86U86 1689 aa12.55□□□□□ -0.4
CSTF1-201ENST00000217109 BECN1Q14457 450 aa12.54□□□□□ -0.4
CSTF1-201ENST00000217109 DNMT1P26358 1616 aaKnown RBP12.54□□□□□ -0.4
CSTF1-201ENST00000217109 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
CSTF1-201ENST00000217109 E9PSI1 815 aa12.54□□□□□ -0.4
CSTF1-201ENST00000217109 C20orf194Q5TEA3 1177 aa12.54□□□□□ -0.4
CSTF1-201ENST00000217109 CENPQQ7L2Z9 268 aaPredicted RBP12.54□□□□□ -0.4
CSTF1-201ENST00000217109 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
CSTF1-201ENST00000217109 SPATA31E1Q6ZUB1 1445 aa12.53□□□□□ -0.4
CSTF1-201ENST00000217109 EIF4G3O43432 1585 aaKnown RBP12.52□□□□□ -0.4
CSTF1-201ENST00000217109 SOX12O15370 315 aa12.52□□□□□ -0.41
CSTF1-201ENST00000217109 BCAR3O75815 825 aa12.52□□□□□ -0.41
CSTF1-201ENST00000217109 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
CSTF1-201ENST00000217109 MS4A1P11836 297 aa12.51□□□□□ -0.41
CSTF1-201ENST00000217109 DENND4BO75064 1496 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-201ENST00000217109 RALGAPBQ86X10 1494 aa12.51□□□□□ -0.41
CSTF1-201ENST00000217109 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
CSTF1-201ENST00000217109 SLKQ9H2G2 1235 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-201ENST00000217109 MINK1Q8N4C8 1332 aaPredicted RBP12.5□□□□□ -0.41
CSTF1-201ENST00000217109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.5□□□□□ -0.41
CSTF1-201ENST00000217109 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
CSTF1-201ENST00000217109 TESK2Q96S53 571 aa12.5□□□□□ -0.41
CSTF1-201ENST00000217109 SMC4Q9NTJ3 1288 aa12.5□□□□□ -0.41
CSTF1-201ENST00000217109 MTHFSP49914 203 aa12.49□□□□□ -0.41
CSTF1-201ENST00000217109 ITPRIPQ8IWB1 547 aa12.49□□□□□ -0.41
CSTF1-201ENST00000217109 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
CSTF1-201ENST00000217109 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms