RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 XRCC6P12956 609 aaKnown RBP eCLIP19.27■□□□□ 0.67
PDZD4-201ENST00000164640 EHBP1L1Q8N3D4 1523 aa19.26■□□□□ 0.67
PDZD4-201ENST00000164640 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
PDZD4-201ENST00000164640 KDM2BQ8NHM5 1336 aa19.25■□□□□ 0.67
PDZD4-201ENST00000164640 TSPY4P0CV99 314 aa19.24■□□□□ 0.67
PDZD4-201ENST00000164640 TSPY10P0CW01 314 aa19.24■□□□□ 0.67
PDZD4-201ENST00000164640 PANK1Q8TE04 598 aa19.24■□□□□ 0.67
PDZD4-201ENST00000164640 CLUAP1Q96AJ1 413 aa19.24■□□□□ 0.67
PDZD4-201ENST00000164640 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
PDZD4-201ENST00000164640 MFAP1P55081 439 aaKnown RBP19.24■□□□□ 0.67
PDZD4-201ENST00000164640 APAF1O14727 1248 aa19.23■□□□□ 0.67
PDZD4-201ENST00000164640 IGHDP01880 384 aa19.22■□□□□ 0.67
PDZD4-201ENST00000164640 TMF1P82094 1093 aa19.22■□□□□ 0.67
PDZD4-201ENST00000164640 BCL2L13Q9BXK5 485 aa19.22■□□□□ 0.67
PDZD4-201ENST00000164640 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
PDZD4-201ENST00000164640 ANP32BQ92688 251 aaKnown RBP19.21■□□□□ 0.67
PDZD4-201ENST00000164640 DAPK1P53355 1430 aa19.21■□□□□ 0.67
PDZD4-201ENST00000164640 TRAK2O60296 914 aa19.2■□□□□ 0.66
PDZD4-201ENST00000164640 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
PDZD4-201ENST00000164640 RRP9O43818 475 aaKnown RBP19.19■□□□□ 0.66
PDZD4-201ENST00000164640 FOXD4L1Q9NU39 408 aa19.19■□□□□ 0.66
PDZD4-201ENST00000164640 CDK13Q14004 1512 aaKnown RBP19.18■□□□□ 0.66
PDZD4-201ENST00000164640 KIAA1107Q9UPP5 1409 aa19.17■□□□□ 0.66
PDZD4-201ENST00000164640 UGGT2Q9NYU1 1516 aa19.17■□□□□ 0.66
PDZD4-201ENST00000164640 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
PDZD4-201ENST00000164640 MCM4P33991 863 aa19.17■□□□□ 0.66
PDZD4-201ENST00000164640 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
PDZD4-201ENST00000164640 TNNT2P45379 298 aaPredicted RBP19.16■□□□□ 0.66
PDZD4-201ENST00000164640 TBC1D2Q9BYX2 928 aa19.16■□□□□ 0.66
PDZD4-201ENST00000164640 ABCC5O15440 1437 aa19.16■□□□□ 0.66
PDZD4-201ENST00000164640 HSCBQ8IWL3 235 aa19.15■□□□□ 0.66
PDZD4-201ENST00000164640 ESPNB1AK53 854 aa19.15■□□□□ 0.66
PDZD4-201ENST00000164640 CLCN1P35523 988 aa19.14■□□□□ 0.65
PDZD4-201ENST00000164640 MRE11P49959 708 aa19.14■□□□□ 0.65
PDZD4-201ENST00000164640 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
PDZD4-201ENST00000164640 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.65
PDZD4-201ENST00000164640 NCLP19338 710 aaKnown RBP19.14■□□□□ 0.65
PDZD4-201ENST00000164640 CENPJQ9HC77 1338 aaPredicted RBP19.13■□□□□ 0.65
PDZD4-201ENST00000164640 ZBTB7CA1YPR0 619 aa19.13■□□□□ 0.65
PDZD4-201ENST00000164640 RRP7AQ9Y3A4 280 aaKnown RBP19.13■□□□□ 0.65
PDZD4-201ENST00000164640 FBLN2P98095 1184 aa19.12■□□□□ 0.65
PDZD4-201ENST00000164640 ANKRD30AQ9BXX3 1397 aa19.12■□□□□ 0.65
PDZD4-201ENST00000164640 RBM10P98175 930 aaKnown RBP19.12■□□□□ 0.65
PDZD4-201ENST00000164640 GRPEL1Q9HAV7 217 aa19.12■□□□□ 0.65
PDZD4-201ENST00000164640 PARD3Q8TEW0 1356 aa19.11■□□□□ 0.65
PDZD4-201ENST00000164640 MAGI3Q5TCQ9 1506 aa19.11■□□□□ 0.65
PDZD4-201ENST00000164640 HSP90AB1P08238 724 aaKnown RBP19.11■□□□□ 0.65
PDZD4-201ENST00000164640 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
PDZD4-201ENST00000164640 CHMP5Q9NZZ3 219 aa19.11■□□□□ 0.65
PDZD4-201ENST00000164640 PLEKHH1Q9ULM0 1364 aa19.1■□□□□ 0.65
PDZD4-201ENST00000164640 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
PDZD4-201ENST00000164640 PER1O15534 1290 aaPredicted RBP19.1■□□□□ 0.65
PDZD4-201ENST00000164640 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
PDZD4-201ENST00000164640 SLFN5Q08AF3 891 aa19.09■□□□□ 0.65
PDZD4-201ENST00000164640 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
PDZD4-201ENST00000164640 ROCK1Q13464 1354 aa19.08■□□□□ 0.65
PDZD4-201ENST00000164640 MSNP26038 577 aaKnown RBP19.08■□□□□ 0.65
PDZD4-201ENST00000164640 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.65
PDZD4-201ENST00000164640 EPRSP07814 1512 aaKnown RBP19.08■□□□□ 0.65
PDZD4-201ENST00000164640 FTSJ3Q8IY81 847 aaKnown RBP19.08■□□□□ 0.64
PDZD4-201ENST00000164640 FAM13BQ9NYF5 915 aa19.07■□□□□ 0.64
PDZD4-201ENST00000164640 PDZRN3Q9UPQ7 1066 aa19.07■□□□□ 0.64
PDZD4-201ENST00000164640 PMFBP1Q8TBY8 1022 aa19.07■□□□□ 0.64
PDZD4-201ENST00000164640 TCOF1Q13428 1488 aaKnown RBP19.06■□□□□ 0.64
PDZD4-201ENST00000164640 C22orf23Q9BZE7 217 aa19.06■□□□□ 0.64
PDZD4-201ENST00000164640 ANKRD50Q9ULJ7 1429 aa19.06■□□□□ 0.64
PDZD4-201ENST00000164640 E9PSI1 815 aa19.05■□□□□ 0.64
PDZD4-201ENST00000164640 HNRNPMP52272 730 aaKnown RBP eCLIP19.05■□□□□ 0.64
PDZD4-201ENST00000164640 RWDD1Q9H446 243 aaPredicted RBP19.04■□□□□ 0.64
PDZD4-201ENST00000164640 GCC2Q8IWJ2 1684 aa19.04■□□□□ 0.64
PDZD4-201ENST00000164640 USP19O94966 1318 aa19.04■□□□□ 0.64
PDZD4-201ENST00000164640 DDX11L8A8MPP1 907 aa19.04■□□□□ 0.64
PDZD4-201ENST00000164640 KIAA1211Q6ZU35 1233 aa19.04■□□□□ 0.64
PDZD4-201ENST00000164640 ABCA5Q8WWZ7 1642 aa19.04■□□□□ 0.64
PDZD4-201ENST00000164640 A0A0U1RQG5 324 aaPredicted RBP19.03■□□□□ 0.64
PDZD4-201ENST00000164640 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
PDZD4-201ENST00000164640 PODXL2Q9NZ53 605 aa19.02■□□□□ 0.64
PDZD4-201ENST00000164640 PZPP20742 1482 aa19.02■□□□□ 0.64
PDZD4-201ENST00000164640 TBC1D32Q96NH3 1257 aa19.02■□□□□ 0.63
PDZD4-201ENST00000164640 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
PDZD4-201ENST00000164640 GBP4Q96PP9 640 aa19.01■□□□□ 0.63
PDZD4-201ENST00000164640 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
PDZD4-201ENST00000164640 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
PDZD4-201ENST00000164640 RALGAPBQ86X10 1494 aa19■□□□□ 0.63
PDZD4-201ENST00000164640 GOLGA6L22H0YM25 854 aa18.99■□□□□ 0.63
PDZD4-201ENST00000164640 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
PDZD4-201ENST00000164640 ANTXR1Q9H6X2 564 aa18.98■□□□□ 0.63
PDZD4-201ENST00000164640 TNNQ9UQP3 1299 aa18.98■□□□□ 0.63
PDZD4-201ENST00000164640 KDM5CP41229 1560 aa18.98■□□□□ 0.63
PDZD4-201ENST00000164640 CCDC144AA2RUR9 1427 aa18.98■□□□□ 0.63
PDZD4-201ENST00000164640 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
PDZD4-201ENST00000164640 R3HCC1Q9Y3T6 440 aaKnown RBP18.97■□□□□ 0.63
PDZD4-201ENST00000164640 PDE3AQ14432 1141 aa18.97■□□□□ 0.63
PDZD4-201ENST00000164640 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
PDZD4-201ENST00000164640 PCDHB15Q9Y5E8 787 aa18.96■□□□□ 0.63
PDZD4-201ENST00000164640 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
PDZD4-201ENST00000164640 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
PDZD4-201ENST00000164640 TPM2P07951 284 aa18.95■□□□□ 0.62
PDZD4-201ENST00000164640 DDX49Q9Y6V7 483 aaKnown RBP18.95■□□□□ 0.62
PDZD4-201ENST00000164640 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms